RNA–Protein interactions for RNA: ENST00000593025.1

RANBP3-230, Transcript of RAN binding protein 3, humanhuman

TSL 4

Gene RANBP3, Length 551 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-230ENST00000593025 RARSP54136 660 aaKnown RBP13.01□□□□□ -0.33
RANBP3-230ENST00000593025 FAM83BQ5T0W9 1011 aa13.01□□□□□ -0.33
RANBP3-230ENST00000593025 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.01□□□□□ -0.33
RANBP3-230ENST00000593025 LCORLQ8N3X6 602 aa13.01□□□□□ -0.33
RANBP3-230ENST00000593025 SSH3Q8TE77 659 aa13.01□□□□□ -0.33
RANBP3-230ENST00000593025 ARHGAP45Q92619 1136 aa13.01□□□□□ -0.33
RANBP3-230ENST00000593025 VTI1AQ96AJ9 217 aa13.01□□□□□ -0.33
RANBP3-230ENST00000593025 SCLYQ96I15 445 aa13.01□□□□□ -0.33
RANBP3-230ENST00000593025 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.01□□□□□ -0.33
RANBP3-230ENST00000593025 TANC1Q9C0D5 1861 aa13.01□□□□□ -0.33
RANBP3-230ENST00000593025 CYP2D7A0A087X1C5 515 aa13□□□□□ -0.33
RANBP3-230ENST00000593025 TCRBV5S4A2TA0A5A2 114 aa13□□□□□ -0.33
RANBP3-230ENST00000593025 B4GALT4O60513 344 aa13□□□□□ -0.33
RANBP3-230ENST00000593025 COPB2P35606 906 aa13□□□□□ -0.33
RANBP3-230ENST00000593025 MRE11P49959 708 aa13□□□□□ -0.33
RANBP3-230ENST00000593025 TAP1Q03518 808 aa13□□□□□ -0.33
RANBP3-230ENST00000593025 SNRNP48Q6IEG0 339 aaKnown RBP13□□□□□ -0.33
RANBP3-230ENST00000593025 ARMCX2Q7L311 632 aa13□□□□□ -0.33
RANBP3-230ENST00000593025 NUP88Q99567 741 aaPredicted RBP13□□□□□ -0.33
RANBP3-230ENST00000593025 TEX13BQ9BXU2 312 aa13□□□□□ -0.33
RANBP3-230ENST00000593025 ABHD16BQ9H3Z7 469 aa13□□□□□ -0.33
RANBP3-230ENST00000593025 SH2D4AQ9H788 454 aa13□□□□□ -0.33
RANBP3-230ENST00000593025 GNEQ9Y223 722 aaKnown RBP13□□□□□ -0.33
RANBP3-230ENST00000593025 LCTP09848 1927 aa13□□□□□ -0.33
RANBP3-230ENST00000593025 ZNF318Q5VUA4 2279 aa12.99□□□□□ -0.33
RANBP3-230ENST00000593025 CT47B1P0C2W7 299 aaPredicted RBP12.99□□□□□ -0.33
RANBP3-230ENST00000593025 TRIM27P14373 513 aa12.99□□□□□ -0.33
RANBP3-230ENST00000593025 PDE6AP16499 860 aa12.99□□□□□ -0.33
RANBP3-230ENST00000593025 GRB10Q13322 594 aa12.99□□□□□ -0.33
RANBP3-230ENST00000593025 ITGA7Q13683 1181 aa12.99□□□□□ -0.33
RANBP3-230ENST00000593025 TMEM63BQ5T3F8 832 aa12.99□□□□□ -0.33
RANBP3-230ENST00000593025 TMED8Q6PL24 325 aaPredicted RBP12.99□□□□□ -0.33
RANBP3-230ENST00000593025 HLA-CQ95604 372 aa12.99□□□□□ -0.33
RANBP3-230ENST00000593025 SWAP70Q9UH65 585 aa12.99□□□□□ -0.33
RANBP3-230ENST00000593025 NOP58Q9Y2X3 529 aaKnown RBP12.99□□□□□ -0.33
RANBP3-230ENST00000593025 DDX49Q9Y6V7 483 aaKnown RBP12.99□□□□□ -0.33
RANBP3-230ENST00000593025 ZBBXA8MT70 800 aa12.98□□□□□ -0.33
RANBP3-230ENST00000593025 PRR33A8MZF0 331 aa12.98□□□□□ -0.33
RANBP3-230ENST00000593025 PRKAB2O43741 272 aa12.98□□□□□ -0.33
RANBP3-230ENST00000593025 GTPBP6O43824 516 aaPredicted RBP12.98□□□□□ -0.33
RANBP3-230ENST00000593025 SURF6O75683 361 aaKnown RBP12.98□□□□□ -0.33
RANBP3-230ENST00000593025 PSMC6P62333 389 aa12.98□□□□□ -0.33
RANBP3-230ENST00000593025 NHLH1Q02575 133 aa12.98□□□□□ -0.33
RANBP3-230ENST00000593025 SLFNL1Q499Z3 407 aa12.98□□□□□ -0.33
RANBP3-230ENST00000593025 TMEM67Q5HYA8 995 aa12.98□□□□□ -0.33
RANBP3-230ENST00000593025 CCDC144CPQ8IYA2 1237 aa12.98□□□□□ -0.33
RANBP3-230ENST00000593025 ARNTL2Q8WYA1 636 aa12.98□□□□□ -0.33
RANBP3-230ENST00000593025 DDX11Q96FC9 970 aa12.98□□□□□ -0.33
RANBP3-230ENST00000593025 CRNKL1Q9BZJ0 848 aaKnown RBP12.98□□□□□ -0.33
RANBP3-230ENST00000593025 TET1Q8NFU7 2136 aa12.97□□□□□ -0.33
RANBP3-230ENST00000593025 ZNF532Q9HCE3 1301 aa12.97□□□□□ -0.33
RANBP3-230ENST00000593025 RBAK-RBAKDNI3L0D1 243 aa12.97□□□□□ -0.33
RANBP3-230ENST00000593025 ATP2A1O14983 1001 aa12.97□□□□□ -0.33
RANBP3-230ENST00000593025 ANP32CO43423 234 aa12.97□□□□□ -0.33
RANBP3-230ENST00000593025 BCAR3O75815 825 aa12.97□□□□□ -0.33
RANBP3-230ENST00000593025 CDK8P49336 464 aa12.97□□□□□ -0.33
RANBP3-230ENST00000593025 SLF1Q9BQI6 1058 aa12.97□□□□□ -0.33
RANBP3-230ENST00000593025 SPC25Q9HBM1 224 aa12.97□□□□□ -0.33
RANBP3-230ENST00000593025 CFAP54Q96N23 3096 aa12.97□□□□□ -0.33
RANBP3-230ENST00000593025 ATP8B2P98198 1209 aa12.96□□□□□ -0.33
RANBP3-230ENST00000593025 CNTN2Q02246 1040 aa12.96□□□□□ -0.33
RANBP3-230ENST00000593025 OS9Q13438 667 aaPredicted RBP12.96□□□□□ -0.33
RANBP3-230ENST00000593025 FSCN1Q16658 493 aaKnown RBP12.96□□□□□ -0.33
RANBP3-230ENST00000593025 SLC9C2Q5TAH2 1124 aa12.96□□□□□ -0.33
RANBP3-230ENST00000593025 C12orf60Q5U649 245 aa12.96□□□□□ -0.33
RANBP3-230ENST00000593025 C16orf86Q6ZW13 317 aa12.96□□□□□ -0.33
RANBP3-230ENST00000593025 TLK2Q86UE8 772 aa12.96□□□□□ -0.33
RANBP3-230ENST00000593025 RPUSD2Q8IZ73 545 aaKnown RBP12.96□□□□□ -0.33
RANBP3-230ENST00000593025 CCDC17Q96LX7 622 aa12.96□□□□□ -0.33
RANBP3-230ENST00000593025 C1orf115Q9H7X2 142 aa12.96□□□□□ -0.33
RANBP3-230ENST00000593025 ARMT1Q9H993 441 aa12.96□□□□□ -0.33
RANBP3-230ENST00000593025 TRMT13Q9NUP7 481 aaKnown RBP12.96□□□□□ -0.33
RANBP3-230ENST00000593025 C5orf42Q9H799 3197 aa12.95□□□□□ -0.34
RANBP3-230ENST00000593025 CABYRO75952 493 aa12.95□□□□□ -0.34
RANBP3-230ENST00000593025 CHGBP05060 677 aa12.95□□□□□ -0.34
RANBP3-230ENST00000593025 CYP2C9P11712 490 aa12.95□□□□□ -0.34
RANBP3-230ENST00000593025 SMPD1P17405 629 aa12.95□□□□□ -0.34
RANBP3-230ENST00000593025 TNFAIP2Q03169 654 aa12.95□□□□□ -0.34
RANBP3-230ENST00000593025 FAM178BQ8IXR5 827 aa12.95□□□□□ -0.34
RANBP3-230ENST00000593025 FAM133AQ8N9E0 248 aa12.95□□□□□ -0.34
RANBP3-230ENST00000593025 ANKS1AQ92625 1134 aa12.95□□□□□ -0.34
RANBP3-230ENST00000593025 ALDH8A1Q9H2A2 487 aaPredicted RBP12.95□□□□□ -0.34
RANBP3-230ENST00000593025 KANSL2Q9H9L4 492 aa12.95□□□□□ -0.34
RANBP3-230ENST00000593025 GOPCQ9HD26 462 aa12.95□□□□□ -0.34
RANBP3-230ENST00000593025 ZBED9Q6R2W3 1325 aa12.94□□□□□ -0.34
RANBP3-230ENST00000593025 MYH4Q9Y623 1939 aa12.94□□□□□ -0.34
RANBP3-230ENST00000593025 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.94□□□□□ -0.34
RANBP3-230ENST00000593025 LCHNA4D1U4 455 aa12.94□□□□□ -0.34
RANBP3-230ENST00000593025 SOWAHBA6NEL2 793 aa12.94□□□□□ -0.34
RANBP3-230ENST00000593025 NDUFB10O96000 172 aa12.94□□□□□ -0.34
RANBP3-230ENST00000593025 PFKMP08237 780 aa12.94□□□□□ -0.34
RANBP3-230ENST00000593025 DEFB128Q7Z7B8 93 aa12.94□□□□□ -0.34
RANBP3-230ENST00000593025 HERC6Q8IVU3 1022 aa12.94□□□□□ -0.34
RANBP3-230ENST00000593025 CPXCR1Q8N123 301 aa12.94□□□□□ -0.34
RANBP3-230ENST00000593025 CLUAP1Q96AJ1 413 aa12.94□□□□□ -0.34
RANBP3-230ENST00000593025 FBXL18Q96ME1 805 aa12.94□□□□□ -0.34
RANBP3-230ENST00000593025 SLC9A7Q96T83 725 aa12.94□□□□□ -0.34
RANBP3-230ENST00000593025 SLC38A10Q9HBR0 1119 aa12.94□□□□□ -0.34
RANBP3-230ENST00000593025 RAVER2Q9HCJ3 691 aaKnown RBP12.94□□□□□ -0.34
RANBP3-230ENST00000593025 PDGFCQ9NRA1 345 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms