RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 GSNP06396 782 aa8.76□□□□□ -1.01
VMP1-215ENST00000592619 SDSP20132 328 aa8.76□□□□□ -1.01
VMP1-215ENST00000592619 CNGA1P29973 690 aa8.76□□□□□ -1.01
VMP1-215ENST00000592619 ZAR1Q86SH2 424 aa8.76□□□□□ -1.01
VMP1-215ENST00000592619 SLC7A14Q8TBB6 771 aa8.76□□□□□ -1.01
VMP1-215ENST00000592619 STAG1Q8WVM7 1258 aa8.76□□□□□ -1.01
VMP1-215ENST00000592619 ZDHHC15Q96MV8 337 aa8.76□□□□□ -1.01
VMP1-215ENST00000592619 ATP8A1Q9Y2Q0 1164 aa8.76□□□□□ -1.01
VMP1-215ENST00000592619 DNAJC8O75937 253 aaPredicted RBP8.75□□□□□ -1.01
VMP1-215ENST00000592619 CBX7O95931 251 aa8.75□□□□□ -1.01
VMP1-215ENST00000592619 SNRPB2P08579 225 aaKnown RBP8.75□□□□□ -1.01
VMP1-215ENST00000592619 POU3F2P20265 443 aaPredicted RBP8.75□□□□□ -1.01
VMP1-215ENST00000592619 POU4F1Q01851 419 aa8.75□□□□□ -1.01
VMP1-215ENST00000592619 CYP4F3Q08477 520 aa8.75□□□□□ -1.01
VMP1-215ENST00000592619 NTRK3Q16288 839 aa8.75□□□□□ -1.01
VMP1-215ENST00000592619 CYP27C1Q4G0S4 372 aa8.75□□□□□ -1.01
VMP1-215ENST00000592619 MAMDC2Q7Z304 686 aaPredicted RBP8.75□□□□□ -1.01
VMP1-215ENST00000592619 TMEM145Q8NBT3 493 aa8.75□□□□□ -1.01
VMP1-215ENST00000592619 DAGLBQ8NCG7 672 aa8.75□□□□□ -1.01
VMP1-215ENST00000592619 DDX1Q92499 740 aaKnown RBP8.75□□□□□ -1.01
VMP1-215ENST00000592619 TARS2Q9BW92 718 aaKnown RBP8.75□□□□□ -1.01
VMP1-215ENST00000592619 GPR62Q9BZJ7 368 aa8.75□□□□□ -1.01
VMP1-215ENST00000592619 SLC52A2Q9HAB3 445 aa8.75□□□□□ -1.01
VMP1-215ENST00000592619 GPR55Q9Y2T6 319 aaPredicted RBP8.75□□□□□ -1.01
VMP1-215ENST00000592619 CAPN6Q9Y6Q1 641 aa8.75□□□□□ -1.01
VMP1-215ENST00000592619 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.74□□□□□ -1.01
VMP1-215ENST00000592619 H0Y8X5 98 aa8.74□□□□□ -1.01
VMP1-215ENST00000592619 VAMP4O75379 141 aa8.74□□□□□ -1.01
VMP1-215ENST00000592619 KCNJ6P48051 423 aa8.74□□□□□ -1.01
VMP1-215ENST00000592619 TNK2Q07912 1038 aa8.74□□□□□ -1.01
VMP1-215ENST00000592619 PPM1KQ8N3J5 372 aa8.74□□□□□ -1.01
VMP1-215ENST00000592619 ZNF655Q8N720 491 aaPredicted RBP8.74□□□□□ -1.01
VMP1-215ENST00000592619 TBC1D32Q96NH3 1257 aa8.74□□□□□ -1.01
VMP1-215ENST00000592619 HDAC8Q9BY41 377 aa8.74□□□□□ -1.01
VMP1-215ENST00000592619 KRTAP9-2Q9BYQ4 174 aa8.74□□□□□ -1.01
VMP1-215ENST00000592619 NDOR1Q9UHB4 597 aa8.74□□□□□ -1.01
VMP1-215ENST00000592619 NPTXRO95502 500 aa8.73□□□□□ -1.01
VMP1-215ENST00000592619 SRFP11831 508 aa8.73□□□□□ -1.01
VMP1-215ENST00000592619 ADMP35318 185 aa8.73□□□□□ -1.01
VMP1-215ENST00000592619 CTSKP43235 329 aa8.73□□□□□ -1.01
VMP1-215ENST00000592619 CYP27A1Q02318 531 aa8.73□□□□□ -1.01
VMP1-215ENST00000592619 PLEKHG6Q3KR16 790 aa8.73□□□□□ -1.01
VMP1-215ENST00000592619 CT47A1Q5JQC4 288 aaPredicted RBP8.73□□□□□ -1.01
VMP1-215ENST00000592619 CWF19L1Q69YN2 538 aaKnown RBP8.73□□□□□ -1.01
VMP1-215ENST00000592619 BRAPQ7Z569 592 aa8.73□□□□□ -1.01
VMP1-215ENST00000592619 JAMLQ86YT9 394 aa8.73□□□□□ -1.01
VMP1-215ENST00000592619 AHI1Q8N157 1196 aa8.73□□□□□ -1.01
VMP1-215ENST00000592619 MFSD4AQ8N468 514 aa8.73□□□□□ -1.01
VMP1-215ENST00000592619 PRPF38AQ8NAV1 312 aaKnown RBP8.73□□□□□ -1.01
VMP1-215ENST00000592619 KREMEN2Q8NCW0 462 aa8.73□□□□□ -1.01
VMP1-215ENST00000592619 COPS5Q92905 334 aa8.73□□□□□ -1.01
VMP1-215ENST00000592619 IRF2BPLQ9H1B7 796 aa8.73□□□□□ -1.01
VMP1-215ENST00000592619 RNF112Q9ULX5 631 aa8.73□□□□□ -1.01
VMP1-215ENST00000592619 RAXQ9Y2V3 346 aa8.73□□□□□ -1.01
VMP1-215ENST00000592619 SHISA3A0PJX4 238 aa8.72□□□□□ -1.01
VMP1-215ENST00000592619 FAM83GA6ND36 823 aa8.72□□□□□ -1.01
VMP1-215ENST00000592619 PRR33A8MZF0 331 aa8.72□□□□□ -1.01
VMP1-215ENST00000592619 ASLP04424 464 aa8.72□□□□□ -1.01
VMP1-215ENST00000592619 PDGFRBP09619 1106 aa8.72□□□□□ -1.01
VMP1-215ENST00000592619 NOP2P46087 812 aaKnown RBP8.72□□□□□ -1.01
VMP1-215ENST00000592619 NFKB2Q00653 900 aa8.72□□□□□ -1.01
VMP1-215ENST00000592619 TESK1Q15569 626 aa8.72□□□□□ -1.01
VMP1-215ENST00000592619 STYK1Q6J9G0 422 aa8.72□□□□□ -1.01
VMP1-215ENST00000592619 CNNM4Q6P4Q7 775 aa8.72□□□□□ -1.01
VMP1-215ENST00000592619 AFAP1L2Q8N4X5 818 aa8.72□□□□□ -1.01
VMP1-215ENST00000592619 DCAF4Q8WV16 495 aa8.72□□□□□ -1.01
VMP1-215ENST00000592619 SCLYQ96I15 445 aa8.72□□□□□ -1.01
VMP1-215ENST00000592619 C7orf69Q9H7B7 122 aa8.72□□□□□ -1.01
VMP1-215ENST00000592619 STOML1Q9UBI4 398 aa8.72□□□□□ -1.01
VMP1-215ENST00000592619 MCM8Q9UJA3 840 aa8.72□□□□□ -1.01
VMP1-215ENST00000592619 MINPP1Q9UNW1 487 aa8.72□□□□□ -1.01
VMP1-215ENST00000592619 ST14Q9Y5Y6 855 aa8.72□□□□□ -1.01
VMP1-215ENST00000592619 HMX2A2RU54 273 aa8.71□□□□□ -1.02
VMP1-215ENST00000592619 BLACEA4D250 179 aa8.71□□□□□ -1.02
VMP1-215ENST00000592619 RBAK-RBAKDNI3L0D1 243 aa8.71□□□□□ -1.02
VMP1-215ENST00000592619 AURKAO14965 403 aa8.71□□□□□ -1.02
VMP1-215ENST00000592619 ECI1P42126 302 aa8.71□□□□□ -1.02
VMP1-215ENST00000592619 CHRNA4P43681 627 aa8.71□□□□□ -1.02
VMP1-215ENST00000592619 SCRN1Q12765 414 aa8.71□□□□□ -1.02
VMP1-215ENST00000592619 CLEC16AQ2KHT3 1053 aa8.71□□□□□ -1.02
VMP1-215ENST00000592619 ACBD5Q5T8D3 534 aaPredicted RBP8.71□□□□□ -1.02
VMP1-215ENST00000592619 DENND5AQ6IQ26 1287 aa8.71□□□□□ -1.02
VMP1-215ENST00000592619 FGD2Q7Z6J4 655 aa8.71□□□□□ -1.02
VMP1-215ENST00000592619 CD163Q86VB7 1156 aa8.71□□□□□ -1.02
VMP1-215ENST00000592619 DDX42Q86XP3 938 aaKnown RBP eCLIP8.71□□□□□ -1.02
VMP1-215ENST00000592619 MCMBPQ9BTE3 642 aa8.71□□□□□ -1.02
VMP1-215ENST00000592619 CHMP4AQ9BY43 222 aa8.71□□□□□ -1.02
VMP1-215ENST00000592619 FAM126AQ9BYI3 521 aaPredicted RBP8.71□□□□□ -1.02
VMP1-215ENST00000592619 DUSP15Q9H1R2 295 aaPredicted RBP8.71□□□□□ -1.02
VMP1-215ENST00000592619 KRTAP9-6A0A140TA67 174 aa8.7□□□□□ -1.02
VMP1-215ENST00000592619 GNAT3A8MTJ3 354 aa8.7□□□□□ -1.02
VMP1-215ENST00000592619 AQP7O14520 342 aa8.7□□□□□ -1.02
VMP1-215ENST00000592619 PMLP29590 882 aa8.7□□□□□ -1.02
VMP1-215ENST00000592619 BMP8BP34820 402 aa8.7□□□□□ -1.02
VMP1-215ENST00000592619 CDKN1CP49918 316 aaPredicted RBP8.7□□□□□ -1.02
VMP1-215ENST00000592619 PRSS53Q2L4Q9 553 aa8.7□□□□□ -1.02
VMP1-215ENST00000592619 DPY19L1Q2PZI1 675 aa8.7□□□□□ -1.02
VMP1-215ENST00000592619 RSPO2Q6UXX9 243 aaPredicted RBP8.7□□□□□ -1.02
VMP1-215ENST00000592619 DDX46Q7L014 1031 aaKnown RBP8.7□□□□□ -1.02
VMP1-215ENST00000592619 UBR7Q8N806 425 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms