RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 FGD4Q96M96 766 aa16.34■□□□□ 0.21
APOC1-208ENST00000592535 TTC14Q96N46 770 aa16.34■□□□□ 0.21
APOC1-208ENST00000592535 ACAD9Q9H845 621 aa16.34■□□□□ 0.21
APOC1-208ENST00000592535 GPCPD1Q9NPB8 672 aa16.34■□□□□ 0.21
APOC1-208ENST00000592535 RNF146Q9NTX7 359 aa16.34■□□□□ 0.21
APOC1-208ENST00000592535 NRBP1Q9UHY1 535 aa16.34■□□□□ 0.21
APOC1-208ENST00000592535 RAD50Q92878 1312 aa16.34■□□□□ 0.21
APOC1-208ENST00000592535 LCTP09848 1927 aa16.33■□□□□ 0.21
APOC1-208ENST00000592535 B4E1Z4 1266 aa16.33■□□□□ 0.2
APOC1-208ENST00000592535 KDM4AO75164 1064 aa16.33■□□□□ 0.2
APOC1-208ENST00000592535 ZNF865P0CJ78 1059 aaPredicted RBP16.33■□□□□ 0.2
APOC1-208ENST00000592535 ALAS1P13196 640 aa16.33■□□□□ 0.2
APOC1-208ENST00000592535 CHMLP26374 656 aa16.33■□□□□ 0.2
APOC1-208ENST00000592535 LRRC26Q2I0M4 334 aa16.33■□□□□ 0.2
APOC1-208ENST00000592535 BTNL9Q6UXG8 535 aa16.33■□□□□ 0.2
APOC1-208ENST00000592535 SENP6Q9GZR1 1112 aaPredicted RBP16.33■□□□□ 0.2
APOC1-208ENST00000592535 CTNNA3Q9UI47 895 aa16.33■□□□□ 0.2
APOC1-208ENST00000592535 ZMYND8Q9ULU4 1186 aaPredicted RBP16.33■□□□□ 0.2
APOC1-208ENST00000592535 SNAI1O95863 264 aaPredicted RBP16.32■□□□□ 0.2
APOC1-208ENST00000592535 MYCNP04198 464 aaPredicted RBP16.32■□□□□ 0.2
APOC1-208ENST00000592535 TKFCQ3LXA3 575 aa16.32■□□□□ 0.2
APOC1-208ENST00000592535 SYDE2Q5VT97 1194 aa16.32■□□□□ 0.2
APOC1-208ENST00000592535 MAMDC4Q6UXC1 1216 aa16.32■□□□□ 0.2
APOC1-208ENST00000592535 ZNF467Q7Z7K2 595 aaPredicted RBP16.32■□□□□ 0.2
APOC1-208ENST00000592535 MSL3Q8N5Y2 521 aaKnown RBP16.32■□□□□ 0.2
APOC1-208ENST00000592535 ARRDC4Q8NCT1 418 aa16.32■□□□□ 0.2
APOC1-208ENST00000592535 TRERF1Q96PN7 1200 aa16.32■□□□□ 0.2
APOC1-208ENST00000592535 SYNGAP1Q96PV0 1343 aa16.32■□□□□ 0.2
APOC1-208ENST00000592535 RANBP17Q9H2T7 1088 aaKnown RBP16.32■□□□□ 0.2
APOC1-208ENST00000592535 PRO3102Q9H379 93 aa16.32■□□□□ 0.2
APOC1-208ENST00000592535 A1CFQ9NQ94 594 aaKnown RBP16.32■□□□□ 0.2
APOC1-208ENST00000592535 RBM27Q9P2N5 1060 aaKnown RBP16.32■□□□□ 0.2
APOC1-208ENST00000592535 CNPY2Q9Y2B0 182 aa16.32■□□□□ 0.2
APOC1-208ENST00000592535 SNHG28P0DPA3 235 aa16.31■□□□□ 0.2
APOC1-208ENST00000592535 SYN1P17600 705 aa16.31■□□□□ 0.2
APOC1-208ENST00000592535 NT5C2P49902 561 aa16.31■□□□□ 0.2
APOC1-208ENST00000592535 CNTN2Q02246 1040 aa16.31■□□□□ 0.2
APOC1-208ENST00000592535 ZNF543Q08ER8 600 aa16.31■□□□□ 0.2
APOC1-208ENST00000592535 MUM1L1Q5H9M0 696 aa16.31■□□□□ 0.2
APOC1-208ENST00000592535 IQCA1Q86XH1 822 aa16.31■□□□□ 0.2
APOC1-208ENST00000592535 DGKHQ86XP1 1220 aa16.31■□□□□ 0.2
APOC1-208ENST00000592535 RUFY2Q8WXA3 655 aa16.31■□□□□ 0.2
APOC1-208ENST00000592535 LENG1Q96BZ8 264 aaPredicted RBP16.31■□□□□ 0.2
APOC1-208ENST00000592535 ZSWIM5Q9P217 1185 aa16.31■□□□□ 0.2
APOC1-208ENST00000592535 CCPG1Q9ULG6 757 aa16.31■□□□□ 0.2
APOC1-208ENST00000592535 LRRC37A2A6NM11 1700 aa16.31■□□□□ 0.2
APOC1-208ENST00000592535 TRIOBPQ9H2D6 2365 aa16.3■□□□□ 0.2
APOC1-208ENST00000592535 KBTBD13C9JR72 458 aa16.3■□□□□ 0.2
APOC1-208ENST00000592535 POTEB2H3BUK9 544 aa16.3■□□□□ 0.2
APOC1-208ENST00000592535 ICAM1P05362 532 aa16.3■□□□□ 0.2
APOC1-208ENST00000592535 RARBP10826 455 aa16.3■□□□□ 0.2
APOC1-208ENST00000592535 AKR1A1P14550 325 aa16.3■□□□□ 0.2
APOC1-208ENST00000592535 ATN1P54259 1190 aaPredicted RBP16.3■□□□□ 0.2
APOC1-208ENST00000592535 PTH1RQ03431 593 aa16.3■□□□□ 0.2
APOC1-208ENST00000592535 LRRC41Q15345 812 aa16.3■□□□□ 0.2
APOC1-208ENST00000592535 FAM133AQ8N9E0 248 aa16.3■□□□□ 0.2
APOC1-208ENST00000592535 ZSCAN10Q96SZ4 725 aaPredicted RBP16.3■□□□□ 0.2
APOC1-208ENST00000592535 KRT23Q9C075 422 aa16.3■□□□□ 0.2
APOC1-208ENST00000592535 XPNPEP3Q9NQH7 507 aa16.3■□□□□ 0.2
APOC1-208ENST00000592535 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.3■□□□□ 0.2
APOC1-208ENST00000592535 PCDH10Q9P2E7 1040 aa16.3■□□□□ 0.2
APOC1-208ENST00000592535 ZHX1Q9UKY1 873 aaPredicted RBP16.3■□□□□ 0.2
APOC1-208ENST00000592535 MYH6P13533 1939 aa16.29■□□□□ 0.2
APOC1-208ENST00000592535 TNKSO95271 1327 aa16.29■□□□□ 0.2
APOC1-208ENST00000592535 PGK1P00558 417 aa16.29■□□□□ 0.2
APOC1-208ENST00000592535 GOLGA8HP0CJ92 632 aa16.29■□□□□ 0.2
APOC1-208ENST00000592535 FXR1P51114 621 aaKnown RBP eCLIP16.29■□□□□ 0.2
APOC1-208ENST00000592535 CCDC178Q5BJE1 867 aa16.29■□□□□ 0.2
APOC1-208ENST00000592535 ARMCX2Q7L311 632 aa16.29■□□□□ 0.2
APOC1-208ENST00000592535 ENAHQ8N8S7 591 aaPredicted RBP16.29■□□□□ 0.2
APOC1-208ENST00000592535 PNMA1Q8ND90 353 aa16.29■□□□□ 0.2
APOC1-208ENST00000592535 ANKS1AQ92625 1134 aa16.29■□□□□ 0.2
APOC1-208ENST00000592535 KAT14Q9H8E8 782 aa16.29■□□□□ 0.2
APOC1-208ENST00000592535 CNNM2Q9H8M5 875 aa16.29■□□□□ 0.2
APOC1-208ENST00000592535 SOWAHBA6NEL2 793 aa16.28■□□□□ 0.2
APOC1-208ENST00000592535 SGSM2O43147 1006 aa16.28■□□□□ 0.2
APOC1-208ENST00000592535 ADCYAP1R1P41586 468 aa16.28■□□□□ 0.2
APOC1-208ENST00000592535 ACVR2BQ13705 512 aa16.28■□□□□ 0.2
APOC1-208ENST00000592535 NSMFQ6X4W1 530 aa16.28■□□□□ 0.2
APOC1-208ENST00000592535 CCDC144CPQ8IYA2 1237 aa16.28■□□□□ 0.2
APOC1-208ENST00000592535 CPVLQ9H3G5 476 aa16.28■□□□□ 0.2
APOC1-208ENST00000592535 CYP39A1Q9NYL5 469 aa16.28■□□□□ 0.2
APOC1-208ENST00000592535 FAM184BQ9ULE4 1060 aa16.28■□□□□ 0.2
APOC1-208ENST00000592535 ASTN1O14525 1302 aa16.27■□□□□ 0.2
APOC1-208ENST00000592535 ADAMTS4O75173 837 aa16.27■□□□□ 0.2
APOC1-208ENST00000592535 CYP21A2P08686 494 aa16.27■□□□□ 0.2
APOC1-208ENST00000592535 RTP1P59025 263 aa16.27■□□□□ 0.2
APOC1-208ENST00000592535 GPATCH4Q5T3I0 446 aaKnown RBP16.27■□□□□ 0.2
APOC1-208ENST00000592535 CYB5R4Q7L1T6 521 aa16.27■□□□□ 0.2
APOC1-208ENST00000592535 SKAP1Q86WV1 359 aa16.27■□□□□ 0.2
APOC1-208ENST00000592535 FERMT2Q96AC1 680 aa16.27■□□□□ 0.2
APOC1-208ENST00000592535 GDF15Q99988 308 aa16.27■□□□□ 0.2
APOC1-208ENST00000592535 UBAC1Q9BSL1 405 aa16.27■□□□□ 0.2
APOC1-208ENST00000592535 UBA5Q9GZZ9 404 aa16.27■□□□□ 0.2
APOC1-208ENST00000592535 KATNBL1Q9H079 304 aa16.27■□□□□ 0.2
APOC1-208ENST00000592535 ABHD16BQ9H3Z7 469 aa16.27■□□□□ 0.2
APOC1-208ENST00000592535 SYNRGQ9UMZ2 1314 aa16.26■□□□□ 0.19
APOC1-208ENST00000592535 NFIBO00712 420 aa16.26■□□□□ 0.19
APOC1-208ENST00000592535 ADCY6O43306 1168 aa16.26■□□□□ 0.19
APOC1-208ENST00000592535 CCDC144BQ3MJ40 725 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms