RNA–Protein interactions for RNA: ENST00000592176.1

APOC1-207, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-207ENST00000592176 STRBPQ96SI9 672 aaKnown RBP10.96□□□□□ -0.65
APOC1-207ENST00000592176 MTIF3Q9H2K0 278 aaKnown RBP10.96□□□□□ -0.65
APOC1-207ENST00000592176 SLC38A10Q9HBR0 1119 aa10.96□□□□□ -0.65
APOC1-207ENST00000592176 IL23AQ9NPF7 189 aa10.96□□□□□ -0.65
APOC1-207ENST00000592176 THEGQ9P2T0 379 aa10.96□□□□□ -0.65
APOC1-207ENST00000592176 FEM1BQ9UK73 627 aa10.96□□□□□ -0.65
APOC1-207ENST00000592176 SMCHD1A6NHR9 2005 aa10.96□□□□□ -0.66
APOC1-207ENST00000592176 ADCY6O43306 1168 aa10.95□□□□□ -0.66
APOC1-207ENST00000592176 CD4P01730 458 aa10.95□□□□□ -0.66
APOC1-207ENST00000592176 OAZ1P54368 228 aa10.95□□□□□ -0.66
APOC1-207ENST00000592176 HNRNPUQ00839 825 aaKnown RBP eCLIP10.95□□□□□ -0.66
APOC1-207ENST00000592176 TNFAIP2Q03169 654 aa10.95□□□□□ -0.66
APOC1-207ENST00000592176 ADGRE1Q14246 886 aa10.95□□□□□ -0.66
APOC1-207ENST00000592176 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.95□□□□□ -0.66
APOC1-207ENST00000592176 ARMCX2Q7L311 632 aa10.95□□□□□ -0.66
APOC1-207ENST00000592176 CCDC144CPQ8IYA2 1237 aa10.95□□□□□ -0.66
APOC1-207ENST00000592176 HERVK_113Q902F9 699 aa10.95□□□□□ -0.66
APOC1-207ENST00000592176 SLC28A3Q9HAS3 691 aa10.95□□□□□ -0.66
APOC1-207ENST00000592176 A0A0G2JMZ2 1700 aa10.95□□□□□ -0.66
APOC1-207ENST00000592176 EYSQ5T1H1 3165 aa10.94□□□□□ -0.66
APOC1-207ENST00000592176 PRUNE2Q8WUY3 3088 aa10.94□□□□□ -0.66
APOC1-207ENST00000592176 GSG1L2A8MUP6 293 aa10.94□□□□□ -0.66
APOC1-207ENST00000592176 CTAGE5O15320 804 aa10.94□□□□□ -0.66
APOC1-207ENST00000592176 CABYRO75952 493 aa10.94□□□□□ -0.66
APOC1-207ENST00000592176 FDX1P10109 184 aa10.94□□□□□ -0.66
APOC1-207ENST00000592176 NKX3-2P78367 333 aa10.94□□□□□ -0.66
APOC1-207ENST00000592176 BEX3Q00994 111 aa10.94□□□□□ -0.66
APOC1-207ENST00000592176 CNTN2Q02246 1040 aa10.94□□□□□ -0.66
APOC1-207ENST00000592176 IL27Q8NEV9 243 aa10.94□□□□□ -0.66
APOC1-207ENST00000592176 AP5M1Q9H0R1 490 aa10.94□□□□□ -0.66
APOC1-207ENST00000592176 TSPYL2Q9H2G4 693 aaPredicted RBP10.94□□□□□ -0.66
APOC1-207ENST00000592176 NKX2-4Q9H2Z4 354 aa10.94□□□□□ -0.66
APOC1-207ENST00000592176 ZNF287Q9HBT7 754 aa10.94□□□□□ -0.66
APOC1-207ENST00000592176 ZBTB40Q9NUA8 1239 aa10.94□□□□□ -0.66
APOC1-207ENST00000592176 SPTBN5Q9NRC6 3674 aaKnown RBP10.94□□□□□ -0.66
APOC1-207ENST00000592176 ZNFX1Q9P2E3 1918 aaKnown RBP10.94□□□□□ -0.66
APOC1-207ENST00000592176 IGKV6D-41A0A0C4DH26 115 aa10.93□□□□□ -0.66
APOC1-207ENST00000592176 ASB14A6NK59 587 aa10.93□□□□□ -0.66
APOC1-207ENST00000592176 DYNC1LI2O43237 492 aaPredicted RBP10.93□□□□□ -0.66
APOC1-207ENST00000592176 ZEB2O60315 1214 aa10.93□□□□□ -0.66
APOC1-207ENST00000592176 BMP3P12645 472 aa10.93□□□□□ -0.66
APOC1-207ENST00000592176 CCL23P55773 120 aa10.93□□□□□ -0.66
APOC1-207ENST00000592176 ITGA7Q13683 1181 aa10.93□□□□□ -0.66
APOC1-207ENST00000592176 SLFN13Q68D06 897 aa10.93□□□□□ -0.66
APOC1-207ENST00000592176 IQSEC1Q6DN90 963 aa10.93□□□□□ -0.66
APOC1-207ENST00000592176 CXCL17Q6UXB2 119 aa10.93□□□□□ -0.66
APOC1-207ENST00000592176 OTOP2Q7RTS6 562 aa10.93□□□□□ -0.66
APOC1-207ENST00000592176 RPUSD2Q8IZ73 545 aaKnown RBP10.93□□□□□ -0.66
APOC1-207ENST00000592176 SLC43A3Q8NBI5 491 aa10.93□□□□□ -0.66
APOC1-207ENST00000592176 ADAMTS19Q8TE59 1207 aa10.93□□□□□ -0.66
APOC1-207ENST00000592176 FGD4Q96M96 766 aa10.93□□□□□ -0.66
APOC1-207ENST00000592176 UHRF1Q96T88 793 aaPredicted RBP10.93□□□□□ -0.66
APOC1-207ENST00000592176 SEZ6LQ9BYH1 1024 aa10.93□□□□□ -0.66
APOC1-207ENST00000592176 KATNBL1Q9H079 304 aa10.93□□□□□ -0.66
APOC1-207ENST00000592176 HIPK3Q9H422 1215 aa10.93□□□□□ -0.66
APOC1-207ENST00000592176 CHMP4BQ9H444 224 aaKnown RBP10.93□□□□□ -0.66
APOC1-207ENST00000592176 HOMER2Q9NSB8 354 aa10.93□□□□□ -0.66
APOC1-207ENST00000592176 MTMR4Q9NYA4 1195 aa10.93□□□□□ -0.66
APOC1-207ENST00000592176 CXXC1Q9P0U4 656 aaPredicted RBP10.93□□□□□ -0.66
APOC1-207ENST00000592176 DDX19BQ9UMR2 479 aa10.93□□□□□ -0.66
APOC1-207ENST00000592176 COG6Q9Y2V7 657 aa10.93□□□□□ -0.66
APOC1-207ENST00000592176 VCANP13611 3396 aa10.93□□□□□ -0.66
APOC1-207ENST00000592176 NAV1Q8NEY1 1877 aa10.93□□□□□ -0.66
APOC1-207ENST00000592176 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.92□□□□□ -0.66
APOC1-207ENST00000592176 SOWAHBA6NEL2 793 aa10.92□□□□□ -0.66
APOC1-207ENST00000592176 TMEM232C9JQI7 657 aa10.92□□□□□ -0.66
APOC1-207ENST00000592176 PRDM1O75626 825 aa10.92□□□□□ -0.66
APOC1-207ENST00000592176 TTLL1O95922 423 aa10.92□□□□□ -0.66
APOC1-207ENST00000592176 APPP05067 770 aa10.92□□□□□ -0.66
APOC1-207ENST00000592176 FAM133AQ8N9E0 248 aa10.92□□□□□ -0.66
APOC1-207ENST00000592176 GMCL1P1Q8NEA9 526 aa10.92□□□□□ -0.66
APOC1-207ENST00000592176 CHURC1Q8WUH1 139 aa10.92□□□□□ -0.66
APOC1-207ENST00000592176 OSBP2Q969R2 916 aa10.92□□□□□ -0.66
APOC1-207ENST00000592176 CEP95Q96GE4 821 aa10.92□□□□□ -0.66
APOC1-207ENST00000592176 LRRCC1Q9C099 1032 aa10.92□□□□□ -0.66
APOC1-207ENST00000592176 TRPV6Q9H1D0 765 aa10.92□□□□□ -0.66
APOC1-207ENST00000592176 ACAD9Q9H845 621 aa10.92□□□□□ -0.66
APOC1-207ENST00000592176 ISY1Q9ULR0 285 aaKnown RBP10.92□□□□□ -0.66
APOC1-207ENST00000592176 SYNPO2Q9UMS6 1093 aa10.92□□□□□ -0.66
APOC1-207ENST00000592176 SLC4A7Q9Y6M7 1214 aa10.92□□□□□ -0.66
APOC1-207ENST00000592176 ASTN1O14525 1302 aa10.91□□□□□ -0.66
APOC1-207ENST00000592176 GRIN2DO15399 1336 aa10.91□□□□□ -0.66
APOC1-207ENST00000592176 PATL2C9JE40 543 aaKnown RBP10.91□□□□□ -0.66
APOC1-207ENST00000592176 RNF113AO15541 343 aaKnown RBP10.91□□□□□ -0.66
APOC1-207ENST00000592176 SMARCA5O60264 1052 aaPredicted RBP10.91□□□□□ -0.66
APOC1-207ENST00000592176 GNAT2P19087 354 aa10.91□□□□□ -0.66
APOC1-207ENST00000592176 TDO2P48775 406 aa10.91□□□□□ -0.66
APOC1-207ENST00000592176 RABGGTBP53611 331 aa10.91□□□□□ -0.66
APOC1-207ENST00000592176 IKQ13123 557 aaPredicted RBP10.91□□□□□ -0.66
APOC1-207ENST00000592176 FSCN1Q16658 493 aaKnown RBP10.91□□□□□ -0.66
APOC1-207ENST00000592176 TKFCQ3LXA3 575 aa10.91□□□□□ -0.66
APOC1-207ENST00000592176 TLK2Q86UE8 772 aa10.91□□□□□ -0.66
APOC1-207ENST00000592176 FAM160B2Q86V87 743 aa10.91□□□□□ -0.66
APOC1-207ENST00000592176 KBTBD3Q8NAB2 608 aa10.91□□□□□ -0.66
APOC1-207ENST00000592176 STAG1Q8WVM7 1258 aa10.91□□□□□ -0.66
APOC1-207ENST00000592176 APPBP2Q92624 585 aa10.91□□□□□ -0.66
APOC1-207ENST00000592176 AGBL1Q96MI9 1066 aa10.91□□□□□ -0.66
APOC1-207ENST00000592176 TRERF1Q96PN7 1200 aa10.91□□□□□ -0.66
APOC1-207ENST00000592176 NOC4LQ9BVI4 516 aaKnown RBP10.91□□□□□ -0.66
APOC1-207ENST00000592176 A1CFQ9NQ94 594 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms