RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 CTNND2Q9UQB3 1225 aa5.3□□□□□ -1.56
VMP1-212ENST00000591782 GPR55Q9Y2T6 319 aaPredicted RBP5.3□□□□□ -1.56
VMP1-212ENST00000591782 FAM221BA6H8Z2 402 aa5.29□□□□□ -1.56
VMP1-212ENST00000591782 STXBP3O00186 592 aa5.29□□□□□ -1.56
VMP1-212ENST00000591782 GDNFP39905 211 aa5.29□□□□□ -1.56
VMP1-212ENST00000591782 NOP2P46087 812 aaKnown RBP5.29□□□□□ -1.56
VMP1-212ENST00000591782 ERVFC1P60507 584 aa5.29□□□□□ -1.56
VMP1-212ENST00000591782 AMPD2Q01433 879 aa5.29□□□□□ -1.56
VMP1-212ENST00000591782 RASGRF1Q13972 1273 aa5.29□□□□□ -1.56
VMP1-212ENST00000591782 POMZP3Q6PJE2 187 aa5.29□□□□□ -1.56
VMP1-212ENST00000591782 SPATC1Q76KD6 591 aa5.29□□□□□ -1.56
VMP1-212ENST00000591782 TRIM59Q8IWR1 403 aa5.29□□□□□ -1.56
VMP1-212ENST00000591782 ST13P5Q8NFI4 369 aaPredicted RBP5.29□□□□□ -1.56
VMP1-212ENST00000591782 BTN2A2Q8WVV5 523 aa5.29□□□□□ -1.56
VMP1-212ENST00000591782 LINC01599Q8WXQ3 324 aa5.29□□□□□ -1.56
VMP1-212ENST00000591782 FCRL2Q96LA5 508 aaPredicted RBP5.29□□□□□ -1.56
VMP1-212ENST00000591782 DEPDC7Q96QD5 511 aa5.29□□□□□ -1.56
VMP1-212ENST00000591782 LNPKQ9C0E8 428 aa5.29□□□□□ -1.56
VMP1-212ENST00000591782 CCDC113Q9H0I3 377 aa5.29□□□□□ -1.56
VMP1-212ENST00000591782 ERVK13-1Q9NX77 482 aa5.29□□□□□ -1.56
VMP1-212ENST00000591782 AGRPO00253 132 aa5.28□□□□□ -1.56
VMP1-212ENST00000591782 AURKAO14965 403 aa5.28□□□□□ -1.56
VMP1-212ENST00000591782 USP2O75604 605 aaPredicted RBP5.28□□□□□ -1.56
VMP1-212ENST00000591782 DUSP4Q13115 394 aa5.28□□□□□ -1.56
VMP1-212ENST00000591782 MTERF2Q49AM1 385 aa5.28□□□□□ -1.56
VMP1-212ENST00000591782 XP32Q5T750 250 aa5.28□□□□□ -1.56
VMP1-212ENST00000591782 GTF2IRD2BQ6EKJ0 949 aa5.28□□□□□ -1.56
VMP1-212ENST00000591782 GTF2IRD2Q86UP8 949 aa5.28□□□□□ -1.56
VMP1-212ENST00000591782 PDZD8Q8NEN9 1154 aa5.28□□□□□ -1.56
VMP1-212ENST00000591782 CCDC120Q96HB5 630 aa5.28□□□□□ -1.56
VMP1-212ENST00000591782 SRPK1Q96SB4 655 aaKnown RBP5.28□□□□□ -1.56
VMP1-212ENST00000591782 PFDN2Q9UHV9 154 aa5.28□□□□□ -1.56
VMP1-212ENST00000591782 LOC100996750A0A140TA64 210 aa5.27□□□□□ -1.57
VMP1-212ENST00000591782 A0A1W2PQU0 124 aa5.27□□□□□ -1.57
VMP1-212ENST00000591782 C2orf71A6NGG8 1288 aa5.27□□□□□ -1.57
VMP1-212ENST00000591782 FGF10O15520 208 aaPredicted RBP5.27□□□□□ -1.57
VMP1-212ENST00000591782 ENDOUP21128 410 aaKnown RBP5.27□□□□□ -1.57
VMP1-212ENST00000591782 GRIA2P42262 883 aa5.27□□□□□ -1.57
VMP1-212ENST00000591782 CEBPAP49715 358 aaPredicted RBP5.27□□□□□ -1.57
VMP1-212ENST00000591782 IRAK1P51617 712 aa5.27□□□□□ -1.57
VMP1-212ENST00000591782 PPP2R2AP63151 447 aa5.27□□□□□ -1.57
VMP1-212ENST00000591782 SCRN1Q12765 414 aa5.27□□□□□ -1.57
VMP1-212ENST00000591782 BMS1Q14692 1282 aaKnown RBP5.27□□□□□ -1.57
VMP1-212ENST00000591782 DPH6Q7L8W6 267 aa5.27□□□□□ -1.57
VMP1-212ENST00000591782 OXR1Q8N573 874 aa5.27□□□□□ -1.57
VMP1-212ENST00000591782 NAT16Q8N8M0 369 aa5.27□□□□□ -1.57
VMP1-212ENST00000591782 FLAD1Q8NFF5 587 aa5.27□□□□□ -1.57
VMP1-212ENST00000591782 MKL1Q969V6 931 aa5.27□□□□□ -1.57
VMP1-212ENST00000591782 MAP6Q96JE9 813 aa5.27□□□□□ -1.57
VMP1-212ENST00000591782 HHIPL1Q96JK4 782 aa5.27□□□□□ -1.57
VMP1-212ENST00000591782 KRTAP4-6Q9BYQ5 205 aa5.27□□□□□ -1.57
VMP1-212ENST00000591782 C19orf44Q9H6X5 657 aa5.27□□□□□ -1.57
VMP1-212ENST00000591782 SP110Q9HB58 689 aa5.27□□□□□ -1.57
VMP1-212ENST00000591782 CDK11AQ9UQ88 783 aaPredicted RBP5.27□□□□□ -1.57
VMP1-212ENST00000591782 BACE2Q9Y5Z0 518 aa5.27□□□□□ -1.57
VMP1-212ENST00000591782 FITM1A5D6W6 292 aa5.26□□□□□ -1.57
VMP1-212ENST00000591782 FADS2P1A8MWK0 482 aa5.26□□□□□ -1.57
VMP1-212ENST00000591782 HPXP02790 462 aa5.26□□□□□ -1.57
VMP1-212ENST00000591782 TRHRP34981 398 aaPredicted RBP5.26□□□□□ -1.57
VMP1-212ENST00000591782 KIR2DL1P43626 348 aaPredicted RBP5.26□□□□□ -1.57
VMP1-212ENST00000591782 KIR2DL2P43627 348 aaPredicted RBP5.26□□□□□ -1.57
VMP1-212ENST00000591782 CYP4F3Q08477 520 aa5.26□□□□□ -1.57
VMP1-212ENST00000591782 IFRD2Q12894 506 aaPredicted RBP5.26□□□□□ -1.57
VMP1-212ENST00000591782 SF1Q15637 639 aaKnown RBP5.26□□□□□ -1.57
VMP1-212ENST00000591782 CCDC144BQ3MJ40 725 aa5.26□□□□□ -1.57
VMP1-212ENST00000591782 TIGD5Q53EQ6 642 aa5.26□□□□□ -1.57
VMP1-212ENST00000591782 RCSD1Q6JBY9 416 aa5.26□□□□□ -1.57
VMP1-212ENST00000591782 CEP128Q6ZU80 1094 aa5.26□□□□□ -1.57
VMP1-212ENST00000591782 ATG4DQ86TL0 474 aaPredicted RBP5.26□□□□□ -1.57
VMP1-212ENST00000591782 ANKS4BQ8N8V4 417 aa5.26□□□□□ -1.57
VMP1-212ENST00000591782 TMEM52Q8NDY8 209 aa5.26□□□□□ -1.57
VMP1-212ENST00000591782 PTCHD1Q96NR3 888 aa5.26□□□□□ -1.57
VMP1-212ENST00000591782 NKX2-4Q9H2Z4 354 aa5.26□□□□□ -1.57
VMP1-212ENST00000591782 ZSWIM4Q9H7M6 989 aa5.26□□□□□ -1.57
VMP1-212ENST00000591782 GPRC5CQ9NQ84 441 aa5.26□□□□□ -1.57
VMP1-212ENST00000591782 TNFRSF10DQ9UBN6 386 aa5.26□□□□□ -1.57
VMP1-212ENST00000591782 IQCA1LA6NCM1 817 aa5.25□□□□□ -1.57
VMP1-212ENST00000591782 NOTOA8MTQ0 251 aa5.25□□□□□ -1.57
VMP1-212ENST00000591782 DIAPH1O60610 1272 aaKnown RBP5.25□□□□□ -1.57
VMP1-212ENST00000591782 PAPLNO95428 1278 aa5.25□□□□□ -1.57
VMP1-212ENST00000591782 CAPNS1P04632 268 aa5.25□□□□□ -1.57
VMP1-212ENST00000591782 RAC2P15153 192 aa5.25□□□□□ -1.57
VMP1-212ENST00000591782 ITGB5P18084 799 aa5.25□□□□□ -1.57
VMP1-212ENST00000591782 AFMP43652 599 aa5.25□□□□□ -1.57
VMP1-212ENST00000591782 SEPHS1P49903 392 aa5.25□□□□□ -1.57
VMP1-212ENST00000591782 CHRNEQ04844 493 aa5.25□□□□□ -1.57
VMP1-212ENST00000591782 SSRP1Q08945 709 aaKnown RBP5.25□□□□□ -1.57
VMP1-212ENST00000591782 NFE2L2Q16236 605 aa5.25□□□□□ -1.57
VMP1-212ENST00000591782 PRSS53Q2L4Q9 553 aa5.25□□□□□ -1.57
VMP1-212ENST00000591782 FYB2Q5VWT5 728 aa5.25□□□□□ -1.57
VMP1-212ENST00000591782 LRP10Q7Z4F1 713 aa5.25□□□□□ -1.57
VMP1-212ENST00000591782 SPPL2CQ8IUH8 684 aa5.25□□□□□ -1.57
VMP1-212ENST00000591782 COPS5Q92905 334 aa5.25□□□□□ -1.57
VMP1-212ENST00000591782 ZNF669Q96BR6 464 aaPredicted RBP5.25□□□□□ -1.57
VMP1-212ENST00000591782 SGSM3Q96HU1 749 aa5.25□□□□□ -1.57
VMP1-212ENST00000591782 DNAJC7Q99615 494 aa5.25□□□□□ -1.57
VMP1-212ENST00000591782 SPATA9Q9BWV2 254 aa5.25□□□□□ -1.57
VMP1-212ENST00000591782 PIF1Q9H611 641 aa5.25□□□□□ -1.57
VMP1-212ENST00000591782 CYP26B1Q9NR63 512 aa5.25□□□□□ -1.57
VMP1-212ENST00000591782 ARHGEF4Q9NR80 690 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms