RNA–Protein interactions for RNA: ENST00000591547.5

RETREG3-211, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-211ENST00000591547 RAVER2Q9HCJ3 691 aaKnown RBP11.81□□□□□ -0.52
RETREG3-211ENST00000591547 MSRAQ9UJ68 235 aa11.81□□□□□ -0.52
RETREG3-211ENST00000591547 GREB1LQ9C091 1923 aaPredicted RBP11.81□□□□□ -0.52
RETREG3-211ENST00000591547 ASTN1O14525 1302 aa11.81□□□□□ -0.52
RETREG3-211ENST00000591547 SYNGAP1Q96PV0 1343 aa11.81□□□□□ -0.52
RETREG3-211ENST00000591547 CD4P01730 458 aa11.8□□□□□ -0.52
RETREG3-211ENST00000591547 FGBP02675 491 aa11.8□□□□□ -0.52
RETREG3-211ENST00000591547 CST5P28325 142 aaPredicted RBP11.8□□□□□ -0.52
RETREG3-211ENST00000591547 ADD2P35612 726 aa11.8□□□□□ -0.52
RETREG3-211ENST00000591547 GJA9P57773 515 aa11.8□□□□□ -0.52
RETREG3-211ENST00000591547 CNTN2Q02246 1040 aa11.8□□□□□ -0.52
RETREG3-211ENST00000591547 RAB30Q15771 203 aa11.8□□□□□ -0.52
RETREG3-211ENST00000591547 KRT40Q6A162 431 aa11.8□□□□□ -0.52
RETREG3-211ENST00000591547 CTR9Q6PD62 1173 aa11.8□□□□□ -0.52
RETREG3-211ENST00000591547 CXCL17Q6UXB2 119 aa11.8□□□□□ -0.52
RETREG3-211ENST00000591547 RHPN1Q8TCX5 695 aa11.8□□□□□ -0.52
RETREG3-211ENST00000591547 VWCEQ96DN2 955 aa11.8□□□□□ -0.52
RETREG3-211ENST00000591547 CCDC17Q96LX7 622 aa11.8□□□□□ -0.52
RETREG3-211ENST00000591547 SLF1Q9BQI6 1058 aa11.8□□□□□ -0.52
RETREG3-211ENST00000591547 TEX13BQ9BXU2 312 aa11.8□□□□□ -0.52
RETREG3-211ENST00000591547 KATNBL1Q9H079 304 aa11.8□□□□□ -0.52
RETREG3-211ENST00000591547 TRPV6Q9H1D0 765 aa11.8□□□□□ -0.52
RETREG3-211ENST00000591547 UPF3AQ9H1J1 476 aaKnown RBP11.8□□□□□ -0.52
RETREG3-211ENST00000591547 BOLA2Q9H3K6 86 aa11.8□□□□□ -0.52
RETREG3-211ENST00000591547 CHMP4BQ9H444 224 aaKnown RBP11.8□□□□□ -0.52
RETREG3-211ENST00000591547 EPHX3Q9H6B9 360 aa11.8□□□□□ -0.52
RETREG3-211ENST00000591547 KANSL2Q9H9L4 492 aa11.8□□□□□ -0.52
RETREG3-211ENST00000591547 CERS4Q9HA82 394 aa11.8□□□□□ -0.52
RETREG3-211ENST00000591547 SLC28A3Q9HAS3 691 aa11.8□□□□□ -0.52
RETREG3-211ENST00000591547 GOPCQ9HD26 462 aa11.8□□□□□ -0.52
RETREG3-211ENST00000591547 ZBTB40Q9NUA8 1239 aa11.8□□□□□ -0.52
RETREG3-211ENST00000591547 GRIN2DO15399 1336 aa11.8□□□□□ -0.52
RETREG3-211ENST00000591547 MROH7Q68CQ1 1323 aa11.8□□□□□ -0.52
RETREG3-211ENST00000591547 MYH4Q9Y623 1939 aa11.8□□□□□ -0.52
RETREG3-211ENST00000591547 SCN5AQ14524 2016 aa11.79□□□□□ -0.52
RETREG3-211ENST00000591547 TRANK1O15050 2925 aa11.79□□□□□ -0.52
RETREG3-211ENST00000591547 TLR3O15455 904 aaKnown RBP11.79□□□□□ -0.52
RETREG3-211ENST00000591547 NDUFB10O96000 172 aa11.79□□□□□ -0.52
RETREG3-211ENST00000591547 PSMC6P62333 389 aa11.79□□□□□ -0.52
RETREG3-211ENST00000591547 IRX6P78412 446 aaPredicted RBP11.79□□□□□ -0.52
RETREG3-211ENST00000591547 CCDC174Q6PII3 467 aa11.79□□□□□ -0.52
RETREG3-211ENST00000591547 ARMCX2Q7L311 632 aa11.79□□□□□ -0.52
RETREG3-211ENST00000591547 CCDC144CPQ8IYA2 1237 aa11.79□□□□□ -0.52
RETREG3-211ENST00000591547 PCSK9Q8NBP7 692 aaKnown RBP11.79□□□□□ -0.52
RETREG3-211ENST00000591547 IL27Q8NEV9 243 aa11.79□□□□□ -0.52
RETREG3-211ENST00000591547 PPP1R13LQ8WUF5 828 aa11.79□□□□□ -0.52
RETREG3-211ENST00000591547 KIFC2Q96AC6 838 aa11.79□□□□□ -0.52
RETREG3-211ENST00000591547 SCLYQ96I15 445 aa11.79□□□□□ -0.52
RETREG3-211ENST00000591547 WNT8AQ9H1J5 351 aa11.79□□□□□ -0.52
RETREG3-211ENST00000591547 ATP8A2Q9NTI2 1148 aa11.79□□□□□ -0.52
RETREG3-211ENST00000591547 SLC4A4Q9Y6R1 1079 aa11.79□□□□□ -0.52
RETREG3-211ENST00000591547 MYH7P12883 1935 aa11.79□□□□□ -0.52
RETREG3-211ENST00000591547 LRRC37A2A6NM11 1700 aa11.78□□□□□ -0.52
RETREG3-211ENST00000591547 EPOPA6NHQ4 379 aa11.78□□□□□ -0.52
RETREG3-211ENST00000591547 F5H6K3 240 aa11.78□□□□□ -0.52
RETREG3-211ENST00000591547 KLRC3Q07444 240 aa11.78□□□□□ -0.52
RETREG3-211ENST00000591547 SKIV2LQ15477 1246 aaKnown RBP11.78□□□□□ -0.52
RETREG3-211ENST00000591547 PPP2R2DQ66LE6 453 aa11.78□□□□□ -0.52
RETREG3-211ENST00000591547 TMED8Q6PL24 325 aaPredicted RBP11.78□□□□□ -0.52
RETREG3-211ENST00000591547 ANKRD35Q8N283 1001 aa11.78□□□□□ -0.52
RETREG3-211ENST00000591547 MSL3Q8N5Y2 521 aaKnown RBP11.78□□□□□ -0.52
RETREG3-211ENST00000591547 KHSRPQ92945 711 aaKnown RBP eCLIP11.78□□□□□ -0.52
RETREG3-211ENST00000591547 PUS7LQ9H0K6 701 aaKnown RBP11.78□□□□□ -0.52
RETREG3-211ENST00000591547 HIPK3Q9H422 1215 aa11.78□□□□□ -0.52
RETREG3-211ENST00000591547 HOMER2Q9NSB8 354 aa11.78□□□□□ -0.52
RETREG3-211ENST00000591547 PAG1Q9NWQ8 432 aa11.78□□□□□ -0.52
RETREG3-211ENST00000591547 SOWAHBA6NEL2 793 aa11.77□□□□□ -0.53
RETREG3-211ENST00000591547 ZBBXA8MT70 800 aa11.77□□□□□ -0.53
RETREG3-211ENST00000591547 B4GALT4O60513 344 aa11.77□□□□□ -0.53
RETREG3-211ENST00000591547 ARHGEF15O94989 841 aa11.77□□□□□ -0.53
RETREG3-211ENST00000591547 RASA1P20936 1047 aa11.77□□□□□ -0.53
RETREG3-211ENST00000591547 COPB2P35606 906 aa11.77□□□□□ -0.53
RETREG3-211ENST00000591547 NOL8Q76FK4 1167 aaKnown RBP11.77□□□□□ -0.53
RETREG3-211ENST00000591547 SPRED2Q7Z698 418 aa11.77□□□□□ -0.53
RETREG3-211ENST00000591547 ERC1Q8IUD2 1116 aa11.77□□□□□ -0.53
RETREG3-211ENST00000591547 SLC43A3Q8NBI5 491 aa11.77□□□□□ -0.53
RETREG3-211ENST00000591547 LRFN3Q9BTN0 628 aa11.77□□□□□ -0.53
RETREG3-211ENST00000591547 NOC4LQ9BVI4 516 aaKnown RBP11.77□□□□□ -0.53
RETREG3-211ENST00000591547 ABHD16BQ9H3Z7 469 aa11.77□□□□□ -0.53
RETREG3-211ENST00000591547 SPC25Q9HBM1 224 aa11.77□□□□□ -0.53
RETREG3-211ENST00000591547 PDGFCQ9NRA1 345 aa11.77□□□□□ -0.53
RETREG3-211ENST00000591547 CLIP2Q9UDT6 1046 aa11.77□□□□□ -0.53
RETREG3-211ENST00000591547 ZBED4O75132 1171 aa11.76□□□□□ -0.53
RETREG3-211ENST00000591547 IFIT2P09913 472 aaKnown RBP11.76□□□□□ -0.53
RETREG3-211ENST00000591547 HOXD11P31277 338 aaPredicted RBP11.76□□□□□ -0.53
RETREG3-211ENST00000591547 SNAP25P60880 206 aa11.76□□□□□ -0.53
RETREG3-211ENST00000591547 TNFAIP2Q03169 654 aa11.76□□□□□ -0.53
RETREG3-211ENST00000591547 ITGA7Q13683 1181 aa11.76□□□□□ -0.53
RETREG3-211ENST00000591547 TTLL4Q14679 1199 aa11.76□□□□□ -0.53
RETREG3-211ENST00000591547 EEPD1Q7L9B9 569 aa11.76□□□□□ -0.53
RETREG3-211ENST00000591547 ZNF467Q7Z7K2 595 aaPredicted RBP11.76□□□□□ -0.53
RETREG3-211ENST00000591547 LRRC47Q8N1G4 583 aaKnown RBP11.76□□□□□ -0.53
RETREG3-211ENST00000591547 PRPF38AQ8NAV1 312 aaKnown RBP11.76□□□□□ -0.53
RETREG3-211ENST00000591547 EXOC6Q8TAG9 804 aa11.76□□□□□ -0.53
RETREG3-211ENST00000591547 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.76□□□□□ -0.53
RETREG3-211ENST00000591547 PURBQ96QR8 312 aaKnown RBP11.76□□□□□ -0.53
RETREG3-211ENST00000591547 SLC38A10Q9HBR0 1119 aa11.76□□□□□ -0.53
RETREG3-211ENST00000591547 SLC4A7Q9Y6M7 1214 aa11.76□□□□□ -0.53
RETREG3-211ENST00000591547 FAM86C2PA6NEL3 165 aa11.75□□□□□ -0.53
RETREG3-211ENST00000591547 MINDY4BA8MYZ0 360 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms