RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 PTH1RQ03431 593 aa7.58□□□□□ -1.2
VPS4B-205ENST00000591383 IMMTQ16891 758 aaKnown RBP7.58□□□□□ -1.2
VPS4B-205ENST00000591383 SHROOM1Q2M3G4 852 aaPredicted RBP7.58□□□□□ -1.2
VPS4B-205ENST00000591383 RRP12Q5JTH9 1297 aaKnown RBP7.58□□□□□ -1.2
VPS4B-205ENST00000591383 C12orf60Q5U649 245 aa7.58□□□□□ -1.2
VPS4B-205ENST00000591383 CYP4F22Q6NT55 531 aa7.58□□□□□ -1.2
VPS4B-205ENST00000591383 SAPCD2Q86UD0 394 aa7.58□□□□□ -1.2
VPS4B-205ENST00000591383 CCDC84Q86UT8 332 aaPredicted RBP7.58□□□□□ -1.2
VPS4B-205ENST00000591383 RASAL3Q86YV0 1011 aa7.58□□□□□ -1.2
VPS4B-205ENST00000591383 TBC1D10CQ8IV04 446 aa7.58□□□□□ -1.2
VPS4B-205ENST00000591383 TRMT44Q8IYL2 757 aaKnown RBP7.58□□□□□ -1.2
VPS4B-205ENST00000591383 ANKRD13AQ8IZ07 590 aa7.58□□□□□ -1.2
VPS4B-205ENST00000591383 TSEN2Q8NCE0 465 aaKnown RBP7.58□□□□□ -1.2
VPS4B-205ENST00000591383 ZKSCAN4Q969J2 545 aaPredicted RBP7.58□□□□□ -1.2
VPS4B-205ENST00000591383 KCTD12Q96CX2 325 aaKnown RBP7.58□□□□□ -1.2
VPS4B-205ENST00000591383 MKNK1Q9BUB5 465 aa7.58□□□□□ -1.2
VPS4B-205ENST00000591383 DSCC1Q9BVC3 393 aa7.58□□□□□ -1.2
VPS4B-205ENST00000591383 IL21Q9HBE4 155 aa7.58□□□□□ -1.2
VPS4B-205ENST00000591383 SWAP70Q9UH65 585 aa7.58□□□□□ -1.2
VPS4B-205ENST00000591383 CDV3Q9UKY7 258 aaKnown RBP7.58□□□□□ -1.2
VPS4B-205ENST00000591383 FCF1Q9Y324 198 aaKnown RBP7.58□□□□□ -1.2
VPS4B-205ENST00000591383 RBM8AQ9Y5S9 174 aaKnown RBP7.58□□□□□ -1.2
VPS4B-205ENST00000591383 SNCAIPQ9Y6H5 919 aa7.58□□□□□ -1.2
VPS4B-205ENST00000591383 DNMT3AQ9Y6K1 912 aaPredicted RBP7.58□□□□□ -1.2
VPS4B-205ENST00000591383 NEDD4P46934 1319 aa7.57□□□□□ -1.2
VPS4B-205ENST00000591383 GH2P01242 217 aa7.57□□□□□ -1.2
VPS4B-205ENST00000591383 FGAP02671 866 aa7.57□□□□□ -1.2
VPS4B-205ENST00000591383 CDK8P49336 464 aa7.57□□□□□ -1.2
VPS4B-205ENST00000591383 SH3BP2P78314 561 aa7.57□□□□□ -1.2
VPS4B-205ENST00000591383 PDE4BQ07343 736 aa7.57□□□□□ -1.2
VPS4B-205ENST00000591383 ABCB5Q2M3G0 1257 aa7.57□□□□□ -1.2
VPS4B-205ENST00000591383 CERKLQ49MI3 558 aaPredicted RBP7.57□□□□□ -1.2
VPS4B-205ENST00000591383 SBK1Q52WX2 424 aa7.57□□□□□ -1.2
VPS4B-205ENST00000591383 LCE2DQ5TA82 110 aaPredicted RBP7.57□□□□□ -1.2
VPS4B-205ENST00000591383 RGMBQ6NW40 437 aa7.57□□□□□ -1.2
VPS4B-205ENST00000591383 CAPN12Q6ZSI9 719 aa7.57□□□□□ -1.2
VPS4B-205ENST00000591383 C16orf86Q6ZW13 317 aa7.57□□□□□ -1.2
VPS4B-205ENST00000591383 CLEC10AQ8IUN9 316 aa7.57□□□□□ -1.2
VPS4B-205ENST00000591383 SCYL3Q8IZE3 742 aa7.57□□□□□ -1.2
VPS4B-205ENST00000591383 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.57□□□□□ -1.2
VPS4B-205ENST00000591383 OPTNQ96CV9 577 aa7.57□□□□□ -1.2
VPS4B-205ENST00000591383 KLRG1Q96E93 195 aa7.57□□□□□ -1.2
VPS4B-205ENST00000591383 CAPNS2Q96L46 248 aa7.57□□□□□ -1.2
VPS4B-205ENST00000591383 FEZ1Q99689 392 aa7.57□□□□□ -1.2
VPS4B-205ENST00000591383 LSG1Q9H089 658 aaKnown RBP7.57□□□□□ -1.2
VPS4B-205ENST00000591383 MKNK2Q9HBH9 465 aa7.57□□□□□ -1.2
VPS4B-205ENST00000591383 CTNNA3Q9UI47 895 aa7.57□□□□□ -1.2
VPS4B-205ENST00000591383 ZBTB21Q9ULJ3 1066 aa7.57□□□□□ -1.2
VPS4B-205ENST00000591383 TRIM75PA6NK02 468 aa7.56□□□□□ -1.2
VPS4B-205ENST00000591383 RASSF10A6NK89 507 aa7.56□□□□□ -1.2
VPS4B-205ENST00000591383 ZNF213O14771 459 aa7.56□□□□□ -1.2
VPS4B-205ENST00000591383 RANBP6O60518 1105 aaKnown RBP7.56□□□□□ -1.2
VPS4B-205ENST00000591383 REC8O95072 547 aa7.56□□□□□ -1.2
VPS4B-205ENST00000591383 S1PR4O95977 384 aa7.56□□□□□ -1.2
VPS4B-205ENST00000591383 AKR1B1P15121 316 aa7.56□□□□□ -1.2
VPS4B-205ENST00000591383 ECE1P42892 770 aa7.56□□□□□ -1.2
VPS4B-205ENST00000591383 ATP2B2Q01814 1243 aa7.56□□□□□ -1.2
VPS4B-205ENST00000591383 RRP1BQ14684 758 aaKnown RBP7.56□□□□□ -1.2
VPS4B-205ENST00000591383 RAB3GAP1Q15042 981 aa7.56□□□□□ -1.2
VPS4B-205ENST00000591383 ALX1Q15699 326 aa7.56□□□□□ -1.2
VPS4B-205ENST00000591383 MAP3K11Q16584 847 aa7.56□□□□□ -1.2
VPS4B-205ENST00000591383 NOL9Q5SY16 702 aaKnown RBP7.56□□□□□ -1.2
VPS4B-205ENST00000591383 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.56□□□□□ -1.2
VPS4B-205ENST00000591383 WNK4Q96J92 1243 aa7.56□□□□□ -1.2
VPS4B-205ENST00000591383 PURBQ96QR8 312 aaKnown RBP7.56□□□□□ -1.2
VPS4B-205ENST00000591383 ZNF287Q9HBT7 754 aa7.56□□□□□ -1.2
VPS4B-205ENST00000591383 TSPY2A6NKD2 308 aa7.55□□□□□ -1.2
VPS4B-205ENST00000591383 PHF20L1A8MW92 1017 aa7.55□□□□□ -1.2
VPS4B-205ENST00000591383 CTNND1O60716 968 aaKnown RBP7.55□□□□□ -1.2
VPS4B-205ENST00000591383 AOC2O75106 756 aa7.55□□□□□ -1.2
VPS4B-205ENST00000591383 MYCP01106 439 aaPredicted RBP7.55□□□□□ -1.2
VPS4B-205ENST00000591383 ASNSP08243 561 aa7.55□□□□□ -1.2
VPS4B-205ENST00000591383 TSPY3P0CV98 308 aa7.55□□□□□ -1.2
VPS4B-205ENST00000591383 TSPY8P0CW00 308 aa7.55□□□□□ -1.2
VPS4B-205ENST00000591383 MAPK1P28482 360 aa7.55□□□□□ -1.2
VPS4B-205ENST00000591383 CAP2P40123 477 aa7.55□□□□□ -1.2
VPS4B-205ENST00000591383 RAB15P59190 212 aa7.55□□□□□ -1.2
VPS4B-205ENST00000591383 ICA1Q05084 483 aa7.55□□□□□ -1.2
VPS4B-205ENST00000591383 GABPAQ06546 454 aa7.55□□□□□ -1.2
VPS4B-205ENST00000591383 PPIL2Q13356 520 aa7.55□□□□□ -1.2
VPS4B-205ENST00000591383 MTMR3Q13615 1198 aa7.55□□□□□ -1.2
VPS4B-205ENST00000591383 SEPT2Q15019 361 aa7.55□□□□□ -1.2
VPS4B-205ENST00000591383 ZYXQ15942 572 aaKnown RBP7.55□□□□□ -1.2
VPS4B-205ENST00000591383 DEFB115Q30KQ5 88 aa7.55□□□□□ -1.2
VPS4B-205ENST00000591383 FAM47AQ5JRC9 791 aa7.55□□□□□ -1.2
VPS4B-205ENST00000591383 AKNAD1Q5T1N1 836 aa7.55□□□□□ -1.2
VPS4B-205ENST00000591383 LDLRAD1Q5T700 205 aa7.55□□□□□ -1.2
VPS4B-205ENST00000591383 MFSD6Q6ZSS7 791 aa7.55□□□□□ -1.2
VPS4B-205ENST00000591383 RALYLQ86SE5 291 aaKnown RBP7.55□□□□□ -1.2
VPS4B-205ENST00000591383 METTL16Q86W50 562 aaKnown RBP7.55□□□□□ -1.2
VPS4B-205ENST00000591383 FOXP4Q8IVH2 680 aaPredicted RBP7.55□□□□□ -1.2
VPS4B-205ENST00000591383 NKX2-3Q8TAU0 364 aa7.55□□□□□ -1.2
VPS4B-205ENST00000591383 KCTD15Q96SI1 283 aaPredicted RBP7.55□□□□□ -1.2
VPS4B-205ENST00000591383 RNF41Q9H4P4 317 aaPredicted RBP7.55□□□□□ -1.2
VPS4B-205ENST00000591383 CABP5Q9NP86 173 aa7.55□□□□□ -1.2
VPS4B-205ENST00000591383 ZNF358Q9NW07 568 aa7.55□□□□□ -1.2
VPS4B-205ENST00000591383 ZNF112Q9UJU3 913 aa7.55□□□□□ -1.2
VPS4B-205ENST00000591383 DCTN4Q9UJW0 460 aa7.55□□□□□ -1.2
VPS4B-205ENST00000591383 ISY1Q9ULR0 285 aaKnown RBP7.55□□□□□ -1.2
VPS4B-205ENST00000591383 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms