RNA–Protein interactions for RNA: ENST00000590034.2

SF3A2-205, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 3

Gene SF3A2, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-205ENST00000590034 CNTN2Q02246 1040 aa16.59■□□□□ 0.25
SF3A2-205ENST00000590034 ARMCX2Q7L311 632 aa16.59■□□□□ 0.25
SF3A2-205ENST00000590034 ZNF444Q8N0Y2 327 aaPredicted RBP16.59■□□□□ 0.25
SF3A2-205ENST00000590034 ANKRD35Q8N283 1001 aa16.59■□□□□ 0.25
SF3A2-205ENST00000590034 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.59■□□□□ 0.25
SF3A2-205ENST00000590034 ABHD16BQ9H3Z7 469 aa16.59■□□□□ 0.25
SF3A2-205ENST00000590034 HOMER2Q9NSB8 354 aa16.59■□□□□ 0.25
SF3A2-205ENST00000590034 SYNPO2Q9UMS6 1093 aa16.59■□□□□ 0.25
SF3A2-205ENST00000590034 TMEM265A0A087WTH1 108 aa16.58■□□□□ 0.24
SF3A2-205ENST00000590034 PATL2C9JE40 543 aaKnown RBP16.58■□□□□ 0.24
SF3A2-205ENST00000590034 TIMP1P01033 207 aa16.58■□□□□ 0.24
SF3A2-205ENST00000590034 APPP05067 770 aa16.58■□□□□ 0.24
SF3A2-205ENST00000590034 ASGR1P07306 291 aa16.58■□□□□ 0.24
SF3A2-205ENST00000590034 GNAT2P19087 354 aa16.58■□□□□ 0.24
SF3A2-205ENST00000590034 DNAJB2P25686 324 aa16.58■□□□□ 0.24
SF3A2-205ENST00000590034 OAZ1P54368 228 aa16.58■□□□□ 0.24
SF3A2-205ENST00000590034 GJA9P57773 515 aa16.58■□□□□ 0.24
SF3A2-205ENST00000590034 GRIN2CQ14957 1233 aa16.58■□□□□ 0.24
SF3A2-205ENST00000590034 SLFN13Q68D06 897 aa16.58■□□□□ 0.24
SF3A2-205ENST00000590034 C16orf59Q7L2K0 433 aa16.58■□□□□ 0.24
SF3A2-205ENST00000590034 CCDC144CPQ8IYA2 1237 aa16.58■□□□□ 0.24
SF3A2-205ENST00000590034 CHST13Q8NET6 341 aa16.58■□□□□ 0.24
SF3A2-205ENST00000590034 NEDD1Q8NHV4 660 aa16.58■□□□□ 0.24
SF3A2-205ENST00000590034 OTUD7AQ8TE49 926 aaPredicted RBP16.58■□□□□ 0.24
SF3A2-205ENST00000590034 GPATCH3Q96I76 525 aa16.58■□□□□ 0.24
SF3A2-205ENST00000590034 GLT1D1Q96MS3 346 aa16.58■□□□□ 0.24
SF3A2-205ENST00000590034 ZNF536O15090 1300 aa16.58■□□□□ 0.24
SF3A2-205ENST00000590034 ELP1O95163 1332 aa16.58■□□□□ 0.24
SF3A2-205ENST00000590034 CHD9Q3L8U1 2897 aa16.58■□□□□ 0.24
SF3A2-205ENST00000590034 MUC3AQ02505 3323 aa16.57■□□□□ 0.24
SF3A2-205ENST00000590034 ASTN1O14525 1302 aa16.57■□□□□ 0.24
SF3A2-205ENST00000590034 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.57■□□□□ 0.24
SF3A2-205ENST00000590034 BMP3P12645 472 aa16.57■□□□□ 0.24
SF3A2-205ENST00000590034 PTGS1P23219 599 aa16.57■□□□□ 0.24
SF3A2-205ENST00000590034 MFSD5Q6N075 450 aa16.57■□□□□ 0.24
SF3A2-205ENST00000590034 RASGRP2Q7LDG7 609 aa16.57■□□□□ 0.24
SF3A2-205ENST00000590034 FAM133AQ8N9E0 248 aa16.57■□□□□ 0.24
SF3A2-205ENST00000590034 PI4K2BQ8TCG2 481 aa16.57■□□□□ 0.24
SF3A2-205ENST00000590034 CHMP4CQ96CF2 233 aa16.57■□□□□ 0.24
SF3A2-205ENST00000590034 ZNF287Q9HBT7 754 aa16.57■□□□□ 0.24
SF3A2-205ENST00000590034 FBXO40Q9UH90 709 aa16.57■□□□□ 0.24
SF3A2-205ENST00000590034 CTDP1Q9Y5B0 961 aaPredicted RBP16.57■□□□□ 0.24
SF3A2-205ENST00000590034 DDX49Q9Y6V7 483 aaKnown RBP16.57■□□□□ 0.24
SF3A2-205ENST00000590034 GBF1Q92538 1859 aa16.56■□□□□ 0.24
SF3A2-205ENST00000590034 MROH7Q68CQ1 1323 aa16.56■□□□□ 0.24
SF3A2-205ENST00000590034 TMEM232C9JQI7 657 aa16.56■□□□□ 0.24
SF3A2-205ENST00000590034 FOXP2O15409 715 aa16.56■□□□□ 0.24
SF3A2-205ENST00000590034 TSPY3P0CV98 308 aa16.56■□□□□ 0.24
SF3A2-205ENST00000590034 TSPY8P0CW00 308 aa16.56■□□□□ 0.24
SF3A2-205ENST00000590034 FAM126BQ8IXS8 530 aa16.56■□□□□ 0.24
SF3A2-205ENST00000590034 USP38Q8NB14 1042 aa16.56■□□□□ 0.24
SF3A2-205ENST00000590034 PCSK9Q8NBP7 692 aaKnown RBP16.56■□□□□ 0.24
SF3A2-205ENST00000590034 AGBL1Q96MI9 1066 aa16.56■□□□□ 0.24
SF3A2-205ENST00000590034 A1CFQ9NQ94 594 aaKnown RBP16.56■□□□□ 0.24
SF3A2-205ENST00000590034 A0A0U1RQG5 324 aaPredicted RBP16.55■□□□□ 0.24
SF3A2-205ENST00000590034 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.55■□□□□ 0.24
SF3A2-205ENST00000590034 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.55■□□□□ 0.24
SF3A2-205ENST00000590034 SOWAHBA6NEL2 793 aa16.55■□□□□ 0.24
SF3A2-205ENST00000590034 ARVCFO00192 962 aa16.55■□□□□ 0.24
SF3A2-205ENST00000590034 CSF2RAP15509 400 aa16.55■□□□□ 0.24
SF3A2-205ENST00000590034 STAT2P52630 851 aa16.55■□□□□ 0.24
SF3A2-205ENST00000590034 NKX3-2P78367 333 aa16.55■□□□□ 0.24
SF3A2-205ENST00000590034 BEX3Q00994 111 aa16.55■□□□□ 0.24
SF3A2-205ENST00000590034 TFAP4Q01664 338 aa16.55■□□□□ 0.24
SF3A2-205ENST00000590034 PPARAQ07869 468 aa16.55■□□□□ 0.24
SF3A2-205ENST00000590034 GNASQ5JWF2 1037 aa16.55■□□□□ 0.24
SF3A2-205ENST00000590034 TMEM240Q5SV17 173 aa16.55■□□□□ 0.24
SF3A2-205ENST00000590034 RASIP1Q5U651 963 aa16.55■□□□□ 0.24
SF3A2-205ENST00000590034 ACAD9Q9H845 621 aa16.55■□□□□ 0.24
SF3A2-205ENST00000590034 RNF146Q9NTX7 359 aa16.55■□□□□ 0.24
SF3A2-205ENST00000590034 TTC41PQ6P2S7 1318 aa16.54■□□□□ 0.24
SF3A2-205ENST00000590034 GRXCR1A8MXD5 290 aa16.54■□□□□ 0.24
SF3A2-205ENST00000590034 CD4P01730 458 aa16.54■□□□□ 0.24
SF3A2-205ENST00000590034 PBX2P40425 430 aa16.54■□□□□ 0.24
SF3A2-205ENST00000590034 SNAP25P60880 206 aa16.54■□□□□ 0.24
SF3A2-205ENST00000590034 PDE4BQ07343 736 aa16.54■□□□□ 0.24
SF3A2-205ENST00000590034 ZMYM1Q5SVZ6 1142 aa16.54■□□□□ 0.24
SF3A2-205ENST00000590034 TIFAQ96CG3 184 aa16.54■□□□□ 0.24
SF3A2-205ENST00000590034 GMCL1Q96IK5 515 aa16.54■□□□□ 0.24
SF3A2-205ENST00000590034 NACAP1Q9BZK3 213 aa16.54■□□□□ 0.24
SF3A2-205ENST00000590034 PPP1R12CQ9BZL4 782 aa16.54■□□□□ 0.24
SF3A2-205ENST00000590034 NAPBQ9H115 298 aa16.54■□□□□ 0.24
SF3A2-205ENST00000590034 ZNF576Q9H609 170 aa16.54■□□□□ 0.24
SF3A2-205ENST00000590034 SPC25Q9HBM1 224 aa16.54■□□□□ 0.24
SF3A2-205ENST00000590034 INCENPQ9NQS7 918 aa16.54■□□□□ 0.24
SF3A2-205ENST00000590034 IL17RBQ9NRM6 502 aa16.54■□□□□ 0.24
SF3A2-205ENST00000590034 ISY1Q9ULR0 285 aaKnown RBP16.54■□□□□ 0.24
SF3A2-205ENST00000590034 GNEQ9Y223 722 aaKnown RBP16.54■□□□□ 0.24
SF3A2-205ENST00000590034 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.54■□□□□ 0.24
SF3A2-205ENST00000590034 NMT2O60551 498 aa16.53■□□□□ 0.24
SF3A2-205ENST00000590034 ACRP10323 421 aa16.53■□□□□ 0.24
SF3A2-205ENST00000590034 MCCP23508 829 aa16.53■□□□□ 0.24
SF3A2-205ENST00000590034 SLC1A4P43007 532 aa16.53■□□□□ 0.24
SF3A2-205ENST00000590034 PPIGQ13427 754 aaKnown RBP eCLIP16.53■□□□□ 0.242e-10■□□□□ 9.3
SF3A2-205ENST00000590034 TMEM63BQ5T3F8 832 aa16.53■□□□□ 0.24
SF3A2-205ENST00000590034 CCDC129Q6ZRS4 1044 aa16.53■□□□□ 0.24
SF3A2-205ENST00000590034 STAG1Q8WVM7 1258 aa16.53■□□□□ 0.24
SF3A2-205ENST00000590034 VTI1AQ96AJ9 217 aa16.53■□□□□ 0.24
SF3A2-205ENST00000590034 FSD1Q9BTV5 496 aa16.53■□□□□ 0.24
SF3A2-205ENST00000590034 PBX4Q9BYU1 374 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms