RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 C16orf86Q6ZW13 317 aa15.41■□□□□ 0.06
PRKCSH-210ENST00000589990 CPXCR1Q8N123 301 aa15.41■□□□□ 0.06
PRKCSH-210ENST00000589990 MSL3Q8N5Y2 521 aaKnown RBP15.41■□□□□ 0.06
PRKCSH-210ENST00000589990 PCSK9Q8NBP7 692 aaKnown RBP15.41■□□□□ 0.06
PRKCSH-210ENST00000589990 TEX13BQ9BXU2 312 aa15.41■□□□□ 0.06
PRKCSH-210ENST00000589990 TRPV6Q9H1D0 765 aa15.41■□□□□ 0.06
PRKCSH-210ENST00000589990 EPOPA6NHQ4 379 aa15.4■□□□□ 0.06
PRKCSH-210ENST00000589990 RBAK-RBAKDNI3L0D1 243 aa15.4■□□□□ 0.06
PRKCSH-210ENST00000589990 TMEM63BQ5T3F8 832 aa15.4■□□□□ 0.06
PRKCSH-210ENST00000589990 PPP2R2DQ66LE6 453 aa15.4■□□□□ 0.06
PRKCSH-210ENST00000589990 CEP85Q6P2H3 762 aa15.4■□□□□ 0.06
PRKCSH-210ENST00000589990 TMED8Q6PL24 325 aaPredicted RBP15.4■□□□□ 0.06
PRKCSH-210ENST00000589990 ARMCX2Q7L311 632 aa15.4■□□□□ 0.06
PRKCSH-210ENST00000589990 CCDC17Q96LX7 622 aa15.4■□□□□ 0.06
PRKCSH-210ENST00000589990 SLF1Q9BQI6 1058 aa15.4■□□□□ 0.06
PRKCSH-210ENST00000589990 C1QTNF1Q9BXJ1 281 aa15.4■□□□□ 0.06
PRKCSH-210ENST00000589990 BCL11AQ9H165 835 aa15.4■□□□□ 0.06
PRKCSH-210ENST00000589990 HIPK3Q9H422 1215 aa15.4■□□□□ 0.06
PRKCSH-210ENST00000589990 KANSL2Q9H9L4 492 aa15.4■□□□□ 0.06
PRKCSH-210ENST00000589990 CERS4Q9HA82 394 aa15.4■□□□□ 0.06
PRKCSH-210ENST00000589990 RAVER2Q9HCJ3 691 aaKnown RBP15.4■□□□□ 0.06
PRKCSH-210ENST00000589990 GOPCQ9HD26 462 aa15.4■□□□□ 0.06
PRKCSH-210ENST00000589990 TLR3O15455 904 aaKnown RBP15.39■□□□□ 0.05
PRKCSH-210ENST00000589990 ARHGEF15O94989 841 aa15.39■□□□□ 0.05
PRKCSH-210ENST00000589990 CNTN2Q02246 1040 aa15.39■□□□□ 0.05
PRKCSH-210ENST00000589990 TTF1Q15361 905 aaPredicted RBP15.39■□□□□ 0.05
PRKCSH-210ENST00000589990 SKIV2LQ15477 1246 aaKnown RBP15.39■□□□□ 0.05
PRKCSH-210ENST00000589990 ZKSCAN2Q63HK3 967 aa15.39■□□□□ 0.05
PRKCSH-210ENST00000589990 CCDC144CPQ8IYA2 1237 aa15.39■□□□□ 0.05
PRKCSH-210ENST00000589990 STK11IPQ8N1F8 1099 aa15.39■□□□□ 0.05
PRKCSH-210ENST00000589990 SLC43A3Q8NBI5 491 aa15.39■□□□□ 0.05
PRKCSH-210ENST00000589990 SCLYQ96I15 445 aa15.39■□□□□ 0.05
PRKCSH-210ENST00000589990 NOC4LQ9BVI4 516 aaKnown RBP15.39■□□□□ 0.05
PRKCSH-210ENST00000589990 ABHD16BQ9H3Z7 469 aa15.39■□□□□ 0.05
PRKCSH-210ENST00000589990 C11orf16Q9NQ32 467 aa15.39■□□□□ 0.05
PRKCSH-210ENST00000589990 LRRC37A2A6NM11 1700 aa15.39■□□□□ 0.05
PRKCSH-210ENST00000589990 SCN5AQ14524 2016 aa15.38■□□□□ 0.05
PRKCSH-210ENST00000589990 PIEZO1Q92508 2521 aa15.38■□□□□ 0.05
PRKCSH-210ENST00000589990 B4GALT4O60513 344 aa15.38■□□□□ 0.05
PRKCSH-210ENST00000589990 NDUFB10O96000 172 aa15.38■□□□□ 0.05
PRKCSH-210ENST00000589990 COPB2P35606 906 aa15.38■□□□□ 0.05
PRKCSH-210ENST00000589990 PSMC6P62333 389 aa15.38■□□□□ 0.05
PRKCSH-210ENST00000589990 SPRED2Q7Z698 418 aa15.38■□□□□ 0.05
PRKCSH-210ENST00000589990 ZNF467Q7Z7K2 595 aaPredicted RBP15.38■□□□□ 0.05
PRKCSH-210ENST00000589990 ATP8A2Q9NTI2 1148 aa15.38■□□□□ 0.05
PRKCSH-210ENST00000589990 MTCH2Q9Y6C9 303 aa15.38■□□□□ 0.05
PRKCSH-210ENST00000589990 MUC6Q6W4X9 2439 aa15.38■□□□□ 0.05
PRKCSH-210ENST00000589990 FAM86C2PA6NEL3 165 aa15.37■□□□□ 0.05
PRKCSH-210ENST00000589990 ERC2O15083 957 aa15.37■□□□□ 0.05
PRKCSH-210ENST00000589990 ADD2P35612 726 aa15.37■□□□□ 0.05
PRKCSH-210ENST00000589990 TTLL4Q14679 1199 aa15.37■□□□□ 0.05
PRKCSH-210ENST00000589990 CTR9Q6PD62 1173 aa15.37■□□□□ 0.05
PRKCSH-210ENST00000589990 ITPRIPQ8IWB1 547 aa15.37■□□□□ 0.05
PRKCSH-210ENST00000589990 RHPN1Q8TCX5 695 aa15.37■□□□□ 0.05
PRKCSH-210ENST00000589990 SPC25Q9HBM1 224 aa15.37■□□□□ 0.05
PRKCSH-210ENST00000589990 SLC4A7Q9Y6M7 1214 aa15.37■□□□□ 0.05
PRKCSH-210ENST00000589990 ZBBXA8MT70 800 aa15.36■□□□□ 0.05
PRKCSH-210ENST00000589990 F5H6K3 240 aa15.36■□□□□ 0.05
PRKCSH-210ENST00000589990 CA3P07451 260 aa15.36■□□□□ 0.05
PRKCSH-210ENST00000589990 NKX3-2P78367 333 aa15.36■□□□□ 0.05
PRKCSH-210ENST00000589990 KLRC3Q07444 240 aa15.36■□□□□ 0.05
PRKCSH-210ENST00000589990 ITGA7Q13683 1181 aa15.36■□□□□ 0.05
PRKCSH-210ENST00000589990 ANKRD35Q8N283 1001 aa15.36■□□□□ 0.05
PRKCSH-210ENST00000589990 KIFC2Q96AC6 838 aa15.36■□□□□ 0.05
PRKCSH-210ENST00000589990 TSPYL2Q9H2G4 693 aaPredicted RBP15.36■□□□□ 0.05
PRKCSH-210ENST00000589990 HOMER2Q9NSB8 354 aa15.36■□□□□ 0.05
PRKCSH-210ENST00000589990 GNEQ9Y223 722 aaKnown RBP15.36■□□□□ 0.05
PRKCSH-210ENST00000589990 PCDHA11Q9Y5I1 949 aa15.36■□□□□ 0.05
PRKCSH-210ENST00000589990 ZBED9Q6R2W3 1325 aa15.36■□□□□ 0.05
PRKCSH-210ENST00000589990 MYH4Q9Y623 1939 aa15.35■□□□□ 0.05
PRKCSH-210ENST00000589990 SOWAHBA6NEL2 793 aa15.35■□□□□ 0.05
PRKCSH-210ENST00000589990 ATP2A1O14983 1001 aa15.35■□□□□ 0.05
PRKCSH-210ENST00000589990 TLL1O43897 1013 aa15.35■□□□□ 0.05
PRKCSH-210ENST00000589990 ATP2A2P16615 1042 aaKnown RBP15.35■□□□□ 0.05
PRKCSH-210ENST00000589990 RASA1P20936 1047 aa15.35■□□□□ 0.05
PRKCSH-210ENST00000589990 TNFAIP2Q03169 654 aa15.35■□□□□ 0.05
PRKCSH-210ENST00000589990 NOL8Q76FK4 1167 aaKnown RBP15.35■□□□□ 0.05
PRKCSH-210ENST00000589990 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.35■□□□□ 0.05
PRKCSH-210ENST00000589990 PRPF38AQ8NAV1 312 aaKnown RBP15.35■□□□□ 0.05
PRKCSH-210ENST00000589990 PPP1R13LQ8WUF5 828 aa15.35■□□□□ 0.05
PRKCSH-210ENST00000589990 AGBL1Q96MI9 1066 aa15.35■□□□□ 0.05
PRKCSH-210ENST00000589990 MTIF3Q9H2K0 278 aaKnown RBP15.35■□□□□ 0.05
PRKCSH-210ENST00000589990 SLC38A10Q9HBR0 1119 aa15.35■□□□□ 0.05
PRKCSH-210ENST00000589990 CD320Q9NPF0 282 aa15.35■□□□□ 0.05
PRKCSH-210ENST00000589990 PDGFCQ9NRA1 345 aa15.35■□□□□ 0.05
PRKCSH-210ENST00000589990 SLC4A4Q9Y6R1 1079 aa15.35■□□□□ 0.05
PRKCSH-210ENST00000589990 BRWD1Q9NSI6 2320 aa15.35■□□□□ 0.05
PRKCSH-210ENST00000589990 SMPD1P17405 629 aa15.34■□□□□ 0.05
PRKCSH-210ENST00000589990 FSCN1Q16658 493 aaKnown RBP15.34■□□□□ 0.05
PRKCSH-210ENST00000589990 TLK2Q86UE8 772 aa15.34■□□□□ 0.05
PRKCSH-210ENST00000589990 FAM133AQ8N9E0 248 aa15.34■□□□□ 0.05
PRKCSH-210ENST00000589990 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.34■□□□□ 0.05
PRKCSH-210ENST00000589990 CHMP4CQ96CF2 233 aa15.34■□□□□ 0.05
PRKCSH-210ENST00000589990 PUS7LQ9H0K6 701 aaKnown RBP15.34■□□□□ 0.05
PRKCSH-210ENST00000589990 BOLA2Q9H3K6 86 aa15.34■□□□□ 0.05
PRKCSH-210ENST00000589990 PAG1Q9NWQ8 432 aa15.34■□□□□ 0.05
PRKCSH-210ENST00000589990 LCTP09848 1927 aa15.33■□□□□ 0.05
PRKCSH-210ENST00000589990 MYH7P12883 1935 aa15.33■□□□□ 0.05
PRKCSH-210ENST00000589990 COL4A4P53420 1690 aaPredicted RBP15.33■□□□□ 0.04
PRKCSH-210ENST00000589990 DYNC1LI2O43237 492 aaPredicted RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms