RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 STAG1Q8WVM7 1258 aa21.35■■□□□ 1.01
H3F3B-209ENST00000589949 CTDP1Q9Y5B0 961 aaPredicted RBP21.35■■□□□ 1.01
H3F3B-209ENST00000589949 DDX49Q9Y6V7 483 aaKnown RBP21.35■■□□□ 1.01
H3F3B-209ENST00000589949 SYNRGQ9UMZ2 1314 aa21.34■■□□□ 1.01
H3F3B-209ENST00000589949 A0A1W2PQ45 241 aaPredicted RBP21.34■■□□□ 1.01
H3F3B-209ENST00000589949 A0A1W2PQY0 241 aa21.34■■□□□ 1.01
H3F3B-209ENST00000589949 HSPD1P10809 573 aaKnown RBP21.34■■□□□ 1.01
H3F3B-209ENST00000589949 ITGB8P26012 769 aa21.34■■□□□ 1.01
H3F3B-209ENST00000589949 TLE2Q04725 743 aa21.34■■□□□ 1.01
H3F3B-209ENST00000589949 CCSAPQ6IQ19 270 aaPredicted RBP21.34■■□□□ 1.01
H3F3B-209ENST00000589949 RCSD1Q6JBY9 416 aa21.34■■□□□ 1.01
H3F3B-209ENST00000589949 ANKRD35Q8N283 1001 aa21.34■■□□□ 1.01
H3F3B-209ENST00000589949 LBHD1Q9BQE6 289 aaPredicted RBP21.34■■□□□ 1.01
H3F3B-209ENST00000589949 KATNBL1Q9H079 304 aa21.34■■□□□ 1.01
H3F3B-209ENST00000589949 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.34■■□□□ 1.01
H3F3B-209ENST00000589949 ZHX1Q9UKY1 873 aaPredicted RBP21.34■■□□□ 1.01
H3F3B-209ENST00000589949 ISY1Q9ULR0 285 aaKnown RBP21.34■■□□□ 1.01
H3F3B-209ENST00000589949 MCM3APO60318 1980 aa21.34■■□□□ 1.01
H3F3B-209ENST00000589949 ASTN1O14525 1302 aa21.33■■□□□ 1.01
H3F3B-209ENST00000589949 ACVR2BQ13705 512 aa21.33■■□□□ 1.01
H3F3B-209ENST00000589949 GPR153Q6NV75 609 aa21.33■■□□□ 1.01
H3F3B-209ENST00000589949 RNF180Q86T96 592 aa21.33■■□□□ 1.01
H3F3B-209ENST00000589949 FAM160B2Q86V87 743 aa21.33■■□□□ 1.01
H3F3B-209ENST00000589949 DEFB123Q8N688 67 aa21.33■■□□□ 1.01
H3F3B-209ENST00000589949 KLHDC9Q8NEP7 349 aa21.33■■□□□ 1.01
H3F3B-209ENST00000589949 EXOC6Q8TAG9 804 aa21.33■■□□□ 1.01
H3F3B-209ENST00000589949 CHURC1Q8WUH1 139 aa21.33■■□□□ 1.01
H3F3B-209ENST00000589949 BADQ92934 168 aa21.33■■□□□ 1.01
H3F3B-209ENST00000589949 A1CFQ9NQ94 594 aaKnown RBP21.33■■□□□ 1.01
H3F3B-209ENST00000589949 PRDM5Q9NQX1 630 aaPredicted RBP21.33■■□□□ 1.01
H3F3B-209ENST00000589949 FBXO40Q9UH90 709 aa21.33■■□□□ 1.01
H3F3B-209ENST00000589949 PRR12Q9ULL5 1215 aa21.33■■□□□ 1.01
H3F3B-209ENST00000589949 MTMR7Q9Y216 660 aa21.33■■□□□ 1.01
H3F3B-209ENST00000589949 SOWAHBA6NEL2 793 aa21.32■■□□□ 1
H3F3B-209ENST00000589949 PLA2G6O60733 806 aa21.32■■□□□ 1
H3F3B-209ENST00000589949 HAND2P61296 217 aa21.32■■□□□ 1
H3F3B-209ENST00000589949 MUM1L1Q5H9M0 696 aa21.32■■□□□ 1
H3F3B-209ENST00000589949 TTBK2Q6IQ55 1244 aa21.32■■□□□ 1
H3F3B-209ENST00000589949 ARMCX2Q7L311 632 aa21.32■■□□□ 1
H3F3B-209ENST00000589949 PLEKHM2Q8IWE5 1019 aa21.32■■□□□ 1
H3F3B-209ENST00000589949 CCDC144CPQ8IYA2 1237 aa21.32■■□□□ 1
H3F3B-209ENST00000589949 FAM133AQ8N9E0 248 aa21.32■■□□□ 1
H3F3B-209ENST00000589949 RNF146Q9NTX7 359 aa21.32■■□□□ 1
H3F3B-209ENST00000589949 FAM184BQ9ULE4 1060 aa21.32■■□□□ 1
H3F3B-209ENST00000589949 TRIM6-TRIM34B2RNG4 842 aa21.31■■□□□ 1
H3F3B-209ENST00000589949 FDX1P10109 184 aa21.31■■□□□ 1
H3F3B-209ENST00000589949 ACLYP53396 1101 aa21.31■■□□□ 1
H3F3B-209ENST00000589949 IKQ13123 557 aaPredicted RBP21.31■■□□□ 1
H3F3B-209ENST00000589949 SHHQ15465 462 aa21.31■■□□□ 1
H3F3B-209ENST00000589949 CCDC144BQ3MJ40 725 aa21.31■■□□□ 1
H3F3B-209ENST00000589949 RRP12Q5JTH9 1297 aaKnown RBP21.31■■□□□ 1
H3F3B-209ENST00000589949 C9orf50Q5SZB4 431 aa21.31■■□□□ 1
H3F3B-209ENST00000589949 CCDC174Q6PII3 467 aa21.31■■□□□ 1
H3F3B-209ENST00000589949 ACAD9Q9H845 621 aa21.31■■□□□ 1
H3F3B-209ENST00000589949 PRKAG2Q9UGJ0 569 aa21.31■■□□□ 1
H3F3B-209ENST00000589949 DUSP11O75319 330 aaKnown RBP21.3■■□□□ 1
H3F3B-209ENST00000589949 ALAS1P13196 640 aa21.3■■□□□ 1
H3F3B-209ENST00000589949 PTGS1P23219 599 aa21.3■■□□□ 1
H3F3B-209ENST00000589949 SLC16A2P36021 539 aa21.3■■□□□ 1
H3F3B-209ENST00000589949 NUCB1Q02818 461 aa21.3■■□□□ 1
H3F3B-209ENST00000589949 KCNA10Q16322 511 aa21.3■■□□□ 1
H3F3B-209ENST00000589949 CHD1LQ86WJ1 897 aa21.3■■□□□ 1
H3F3B-209ENST00000589949 TBC1D10CQ8IV04 446 aa21.3■■□□□ 1
H3F3B-209ENST00000589949 RILPL2Q969X0 211 aa21.3■■□□□ 1
H3F3B-209ENST00000589949 TRERF1Q96PN7 1200 aa21.3■■□□□ 1
H3F3B-209ENST00000589949 PURBQ96QR8 312 aaKnown RBP21.3■■□□□ 1
H3F3B-209ENST00000589949 TMEM47Q9BQJ4 181 aa21.3■■□□□ 1
H3F3B-209ENST00000589949 ABHD16BQ9H3Z7 469 aa21.3■■□□□ 1
H3F3B-209ENST00000589949 MTMR10Q9NXD2 777 aa21.3■■□□□ 1
H3F3B-209ENST00000589949 CCDC171Q6TFL3 1326 aa21.29■■□□□ 1
H3F3B-209ENST00000589949 CTAGE5O15320 804 aa21.29■■□□□ 1
H3F3B-209ENST00000589949 SDSP20132 328 aa21.29■■□□□ 1
H3F3B-209ENST00000589949 EPHB4P54760 987 aa21.29■■□□□ 1
H3F3B-209ENST00000589949 TSEN34Q9BSV6 310 aaKnown RBP21.29■■□□□ 1
H3F3B-209ENST00000589949 RWDD1Q9H446 243 aaPredicted RBP21.29■■□□□ 1
H3F3B-209ENST00000589949 TOMM22Q9NS69 142 aa21.29■■□□□ 1
H3F3B-209ENST00000589949 ZMYM6O95789 1325 aa21.29■■□□□ 1
H3F3B-209ENST00000589949 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.28■■□□□ 1
H3F3B-209ENST00000589949 POTEB2H3BUK9 544 aa21.28■■□□□ 1
H3F3B-209ENST00000589949 PQBP1O60828 265 aaKnown RBP21.28■■□□□ 1
H3F3B-209ENST00000589949 AAMPQ13685 434 aa21.28■■□□□ 1
H3F3B-209ENST00000589949 PPP4R3BQ5MIZ7 849 aa21.28■■□□□ 1
H3F3B-209ENST00000589949 TICAM2Q86XR7 235 aa21.28■■□□□ 1
H3F3B-209ENST00000589949 UPF3AQ9H1J1 476 aaKnown RBP21.28■■□□□ 1
H3F3B-209ENST00000589949 OSBPL3Q9H4L5 887 aa21.28■■□□□ 1
H3F3B-209ENST00000589949 TCP11L1Q9NUJ3 509 aa21.28■■□□□ 1
H3F3B-209ENST00000589949 CLTBP09497 229 aa21.27■■□□□ 1
H3F3B-209ENST00000589949 FAAP100Q0VG06 881 aa21.27■■□□□ 1
H3F3B-209ENST00000589949 CCDC96Q2M329 555 aa21.27■■□□□ 1
H3F3B-209ENST00000589949 TMEM63BQ5T3F8 832 aa21.27■■□□□ 1
H3F3B-209ENST00000589949 BTNL9Q6UXG8 535 aa21.27■■□□□ 1
H3F3B-209ENST00000589949 DCAF4Q8WV16 495 aa21.27■■□□□ 1
H3F3B-209ENST00000589949 LCTP09848 1927 aa21.27■■□□□ 1
H3F3B-209ENST00000589949 FRMPD2Q68DX3 1309 aaPredicted RBP21.27■□□□□ 0.99
H3F3B-209ENST00000589949 KIAA0355O15063 1070 aa21.26■□□□□ 0.99
H3F3B-209ENST00000589949 C6orf222P0C671 652 aaPredicted RBP21.26■□□□□ 0.99
H3F3B-209ENST00000589949 TOP1P11387 765 aaKnown RBP21.26■□□□□ 0.99
H3F3B-209ENST00000589949 CST5P28325 142 aaPredicted RBP21.26■□□□□ 0.99
H3F3B-209ENST00000589949 GJA9P57773 515 aa21.26■□□□□ 0.99
H3F3B-209ENST00000589949 TKFCQ3LXA3 575 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms