RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 HARSP12081 509 aaKnown RBP16.28■□□□□ 0.2
RETREG3-208ENST00000589797 ALAS1P13196 640 aa16.28■□□□□ 0.2
RETREG3-208ENST00000589797 AKR1B1P15121 316 aa16.28■□□□□ 0.2
RETREG3-208ENST00000589797 TCHPQ9BT92 498 aa16.28■□□□□ 0.2
RETREG3-208ENST00000589797 EHMT1Q9H9B1 1298 aa16.28■□□□□ 0.2
RETREG3-208ENST00000589797 REREQ9P2R6 1566 aa16.28■□□□□ 0.2
RETREG3-208ENST00000589797 RFX7Q2KHR2 1363 aa16.27■□□□□ 0.2
RETREG3-208ENST00000589797 GTPBP6O43824 516 aaPredicted RBP16.27■□□□□ 0.2
RETREG3-208ENST00000589797 PLCG1P19174 1290 aa16.27■□□□□ 0.2
RETREG3-208ENST00000589797 C12orf60Q5U649 245 aa16.27■□□□□ 0.2
RETREG3-208ENST00000589797 METTL16Q86W50 562 aaKnown RBP16.27■□□□□ 0.2
RETREG3-208ENST00000589797 GPBP1Q86WP2 473 aa16.27■□□□□ 0.2
RETREG3-208ENST00000589797 TBC1D16Q8TBP0 767 aa16.27■□□□□ 0.2
RETREG3-208ENST00000589797 HPS3Q969F9 1004 aa16.27■□□□□ 0.2
RETREG3-208ENST00000589797 PPP2R2CQ9Y2T4 447 aa16.27■□□□□ 0.2
RETREG3-208ENST00000589797 DLG5Q8TDM6 1919 aa16.27■□□□□ 0.2
RETREG3-208ENST00000589797 PNPLA7Q6ZV29 1317 aa16.27■□□□□ 0.2
RETREG3-208ENST00000589797 B4DLN1 442 aa16.27■□□□□ 0.2
RETREG3-208ENST00000589797 PCP11498 1178 aaKnown RBP16.27■□□□□ 0.2
RETREG3-208ENST00000589797 FAM212AQ96EL1 285 aa16.27■□□□□ 0.2
RETREG3-208ENST00000589797 DNM3Q9UQ16 869 aa16.27■□□□□ 0.2
RETREG3-208ENST00000589797 GCNT3O95395 438 aa16.27■□□□□ 0.19
RETREG3-208ENST00000589797 GH2P01242 217 aa16.27■□□□□ 0.19
RETREG3-208ENST00000589797 RXRBP28702 533 aa16.27■□□□□ 0.19
RETREG3-208ENST00000589797 RBL2Q08999 1139 aa16.27■□□□□ 0.19
RETREG3-208ENST00000589797 SEPT2Q15019 361 aa16.27■□□□□ 0.19
RETREG3-208ENST00000589797 HS2ST1Q7LGA3 356 aa16.27■□□□□ 0.19
RETREG3-208ENST00000589797 FBXO33Q7Z6M2 555 aa16.27■□□□□ 0.19
RETREG3-208ENST00000589797 NIM1KQ8IY84 436 aa16.27■□□□□ 0.19
RETREG3-208ENST00000589797 RGS22Q8NE09 1264 aa16.27■□□□□ 0.19
RETREG3-208ENST00000589797 ALS2CR12Q96Q35 445 aa16.27■□□□□ 0.19
RETREG3-208ENST00000589797 POLD1P28340 1107 aa16.26■□□□□ 0.19
RETREG3-208ENST00000589797 ETF1P62495 437 aaKnown RBP16.26■□□□□ 0.19
RETREG3-208ENST00000589797 PPP2R3AQ06190 1150 aa16.26■□□□□ 0.19
RETREG3-208ENST00000589797 FBXO11Q86XK2 927 aa16.26■□□□□ 0.19
RETREG3-208ENST00000589797 TEX33O43247 280 aa16.26■□□□□ 0.19
RETREG3-208ENST00000589797 EIF3JO75822 258 aaKnown RBP16.26■□□□□ 0.19
RETREG3-208ENST00000589797 EN1Q05925 392 aaPredicted RBP16.26■□□□□ 0.19
RETREG3-208ENST00000589797 DHX40Q8IX18 779 aaKnown RBP16.26■□□□□ 0.19
RETREG3-208ENST00000589797 MYCT1Q8N699 235 aa16.26■□□□□ 0.19
RETREG3-208ENST00000589797 GSDMAQ96QA5 445 aa16.26■□□□□ 0.19
RETREG3-208ENST00000589797 KCNF1Q9H3M0 494 aa16.26■□□□□ 0.19
RETREG3-208ENST00000589797 MROH7-TTC4A0A0A0MT08 1334 aa16.26■□□□□ 0.19
RETREG3-208ENST00000589797 SOWAHDA6NJG2 315 aa16.26■□□□□ 0.19
RETREG3-208ENST00000589797 ENC1O14682 589 aa16.26■□□□□ 0.19
RETREG3-208ENST00000589797 PFKFB3Q16875 520 aaPredicted RBP16.26■□□□□ 0.19
RETREG3-208ENST00000589797 TIGD1Q96MW7 591 aa16.26■□□□□ 0.19
RETREG3-208ENST00000589797 PIK3C2AO00443 1686 aa16.26■□□□□ 0.19
RETREG3-208ENST00000589797 USP17L10C9JJH3 530 aa16.26■□□□□ 0.19
RETREG3-208ENST00000589797 SLURP2P0DP57 97 aa16.26■□□□□ 0.19
RETREG3-208ENST00000589797 IQCB1Q15051 598 aa16.26■□□□□ 0.19
RETREG3-208ENST00000589797 MRPL44Q9H9J2 332 aaKnown RBP16.26■□□□□ 0.19
RETREG3-208ENST00000589797 BCCIPQ9P287 314 aaKnown RBP eCLIP16.26■□□□□ 0.19
RETREG3-208ENST00000589797 NRXN3Q9Y4C0 1643 aa16.25■□□□□ 0.19
RETREG3-208ENST00000589797 CCDC169A6NNP5 214 aa16.25■□□□□ 0.19
RETREG3-208ENST00000589797 BMS1Q14692 1282 aaKnown RBP16.25■□□□□ 0.19
RETREG3-208ENST00000589797 TMEM110-MUSTN1A8MSY1 372 aa16.25■□□□□ 0.19
RETREG3-208ENST00000589797 LONP1P36776 959 aaKnown RBP16.25■□□□□ 0.19
RETREG3-208ENST00000589797 GRM1Q13255 1194 aa16.25■□□□□ 0.19
RETREG3-208ENST00000589797 MAPK8IP2Q13387 824 aaPredicted RBP16.25■□□□□ 0.19
RETREG3-208ENST00000589797 CNKSR1Q969H4 720 aa16.25■□□□□ 0.19
RETREG3-208ENST00000589797 KANSL2Q9H9L4 492 aa16.25■□□□□ 0.19
RETREG3-208ENST00000589797 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.25■□□□□ 0.19
RETREG3-208ENST00000589797 BCL9O00512 1426 aa16.25■□□□□ 0.19
RETREG3-208ENST00000589797 CRKP46108 304 aa16.25■□□□□ 0.19
RETREG3-208ENST00000589797 CTNNBL1Q8WYA6 563 aaPredicted RBP16.25■□□□□ 0.19
RETREG3-208ENST00000589797 PPP1R13BQ96KQ4 1090 aa16.25■□□□□ 0.19
RETREG3-208ENST00000589797 SFI1A8K8P3 1242 aa16.24■□□□□ 0.19
RETREG3-208ENST00000589797 KRT83P78385 493 aa16.24■□□□□ 0.19
RETREG3-208ENST00000589797 ZNF408Q9H9D4 720 aa16.24■□□□□ 0.19
RETREG3-208ENST00000589797 CETN3O15182 167 aa16.24■□□□□ 0.19
RETREG3-208ENST00000589797 COPB1P53618 953 aaKnown RBP16.24■□□□□ 0.19
RETREG3-208ENST00000589797 NBPF11Q86T75 865 aa16.24■□□□□ 0.19
RETREG3-208ENST00000589797 TAX1BP1Q86VP1 789 aa16.24■□□□□ 0.19
RETREG3-208ENST00000589797 CERS3Q8IU89 383 aa16.24■□□□□ 0.19
RETREG3-208ENST00000589797 ACRBPQ8NEB7 543 aa16.24■□□□□ 0.19
RETREG3-208ENST00000589797 COA1Q9GZY4 146 aa16.24■□□□□ 0.19
RETREG3-208ENST00000589797 GOPCQ9HD26 462 aa16.24■□□□□ 0.19
RETREG3-208ENST00000589797 ZBTB12Q9Y330 459 aaPredicted RBP16.24■□□□□ 0.19
RETREG3-208ENST00000589797 TACC1O75410 805 aa16.24■□□□□ 0.19
RETREG3-208ENST00000589797 ZBTB7AO95365 584 aa16.24■□□□□ 0.19
RETREG3-208ENST00000589797 CETN1Q12798 172 aa16.24■□□□□ 0.19
RETREG3-208ENST00000589797 DNAJC21Q5F1R6 531 aaKnown RBP16.24■□□□□ 0.19
RETREG3-208ENST00000589797 CYP26C1Q6V0L0 522 aa16.24■□□□□ 0.19
RETREG3-208ENST00000589797 NPR1P16066 1061 aa16.23■□□□□ 0.19
RETREG3-208ENST00000589797 CCDC84Q86UT8 332 aaPredicted RBP16.23■□□□□ 0.19
RETREG3-208ENST00000589797 ERO1AQ96HE7 468 aa16.23■□□□□ 0.19
RETREG3-208ENST00000589797 TUBGCP2Q9BSJ2 902 aa16.23■□□□□ 0.19
RETREG3-208ENST00000589797 IKBKBO14920 756 aa16.23■□□□□ 0.19
RETREG3-208ENST00000589797 VEGFAP15692 232 aaPredicted RBP16.23■□□□□ 0.19
RETREG3-208ENST00000589797 CYP27A1Q02318 531 aa16.23■□□□□ 0.19
RETREG3-208ENST00000589797 TROAPQ12815 778 aa16.23■□□□□ 0.19
RETREG3-208ENST00000589797 OR8K1Q8NGG5 319 aa16.23■□□□□ 0.19
RETREG3-208ENST00000589797 GOLGA1Q92805 767 aa16.23■□□□□ 0.19
RETREG3-208ENST00000589797 RIOK1Q9BRS2 568 aaKnown RBP16.23■□□□□ 0.19
RETREG3-208ENST00000589797 ZNF277Q9NRM2 450 aaPredicted RBP16.23■□□□□ 0.19
RETREG3-208ENST00000589797 TESPA1A2RU30 521 aaPredicted RBP16.23■□□□□ 0.19
RETREG3-208ENST00000589797 TDP2O95551 362 aa16.23■□□□□ 0.19
RETREG3-208ENST00000589797 LMAN1P49257 510 aa16.23■□□□□ 0.19
RETREG3-208ENST00000589797 IQCEQ6IPM2 695 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms