RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 CCDC171Q6TFL3 1326 aa16.96■□□□□ 0.31
MBD1-220ENST00000589758 NMT2O60551 498 aa16.96■□□□□ 0.31
MBD1-220ENST00000589758 SNAI1O95863 264 aaPredicted RBP16.96■□□□□ 0.31
MBD1-220ENST00000589758 NUCB1Q02818 461 aa16.96■□□□□ 0.31
MBD1-220ENST00000589758 DCAF4Q8WV16 495 aa16.96■□□□□ 0.31
MBD1-220ENST00000589758 FERMT2Q96AC1 680 aa16.96■□□□□ 0.31
MBD1-220ENST00000589758 LRCH3Q96II8 777 aa16.96■□□□□ 0.31
MBD1-220ENST00000589758 ABHD16BQ9H3Z7 469 aa16.96■□□□□ 0.31
MBD1-220ENST00000589758 TCP11L1Q9NUJ3 509 aa16.96■□□□□ 0.31
MBD1-220ENST00000589758 PGK1P00558 417 aa16.95■□□□□ 0.3
MBD1-220ENST00000589758 SDSP20132 328 aa16.95■□□□□ 0.3
MBD1-220ENST00000589758 ACVR2BQ13705 512 aa16.95■□□□□ 0.3
MBD1-220ENST00000589758 TRIM60Q495X7 471 aa16.95■□□□□ 0.3
MBD1-220ENST00000589758 RRP12Q5JTH9 1297 aaKnown RBP16.95■□□□□ 0.3
MBD1-220ENST00000589758 KCTD1Q719H9 257 aa16.95■□□□□ 0.3
MBD1-220ENST00000589758 ZNF589Q86UQ0 364 aaPredicted RBP16.95■□□□□ 0.3
MBD1-220ENST00000589758 PLEKHM2Q8IWE5 1019 aa16.95■□□□□ 0.3
MBD1-220ENST00000589758 TSEN34Q9BSV6 310 aaKnown RBP16.95■□□□□ 0.3
MBD1-220ENST00000589758 HOMER2Q9NSB8 354 aa16.95■□□□□ 0.3
MBD1-220ENST00000589758 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.95■□□□□ 0.3
MBD1-220ENST00000589758 TACC3Q9Y6A5 838 aa16.95■□□□□ 0.3
MBD1-220ENST00000589758 ZNF536O15090 1300 aa16.95■□□□□ 0.3
MBD1-220ENST00000589758 POTEB2H3BUK9 544 aa16.94■□□□□ 0.3
MBD1-220ENST00000589758 ADAMTS4O75173 837 aa16.94■□□□□ 0.3
MBD1-220ENST00000589758 DUSP11O75319 330 aaKnown RBP16.94■□□□□ 0.3
MBD1-220ENST00000589758 TOP1P11387 765 aaKnown RBP16.94■□□□□ 0.3
MBD1-220ENST00000589758 MFSD6Q6ZSS7 791 aa16.94■□□□□ 0.3
MBD1-220ENST00000589758 AGBL1Q96MI9 1066 aa16.94■□□□□ 0.3
MBD1-220ENST00000589758 TRERF1Q96PN7 1200 aa16.94■□□□□ 0.3
MBD1-220ENST00000589758 RNF41Q9H4P4 317 aaPredicted RBP16.94■□□□□ 0.3
MBD1-220ENST00000589758 RNF146Q9NTX7 359 aa16.94■□□□□ 0.3
MBD1-220ENST00000589758 ZHX1Q9UKY1 873 aaPredicted RBP16.94■□□□□ 0.3
MBD1-220ENST00000589758 PRR12Q9ULL5 1215 aa16.94■□□□□ 0.3
MBD1-220ENST00000589758 MOXD2PA6NHM9 499 aa16.93■□□□□ 0.3
MBD1-220ENST00000589758 HIP1O00291 1037 aa16.93■□□□□ 0.3
MBD1-220ENST00000589758 ALAS1P13196 640 aa16.93■□□□□ 0.3
MBD1-220ENST00000589758 NT5C2P49902 561 aa16.93■□□□□ 0.3
MBD1-220ENST00000589758 CCDC96Q2M329 555 aa16.93■□□□□ 0.3
MBD1-220ENST00000589758 AKNAD1Q5T1N1 836 aa16.93■□□□□ 0.3
MBD1-220ENST00000589758 FAM133AQ8N9E0 248 aa16.93■□□□□ 0.3
MBD1-220ENST00000589758 NUP133Q8WUM0 1156 aa16.93■□□□□ 0.3
MBD1-220ENST00000589758 CHMP4CQ96CF2 233 aa16.93■□□□□ 0.3
MBD1-220ENST00000589758 TTC14Q96N46 770 aa16.93■□□□□ 0.3
MBD1-220ENST00000589758 SPC25Q9HBM1 224 aa16.93■□□□□ 0.3
MBD1-220ENST00000589758 A1CFQ9NQ94 594 aaKnown RBP16.93■□□□□ 0.3
MBD1-220ENST00000589758 PRDM5Q9NQX1 630 aaPredicted RBP16.93■□□□□ 0.3
MBD1-220ENST00000589758 MTMR7Q9Y216 660 aa16.93■□□□□ 0.3
MBD1-220ENST00000589758 RANBP2P49792 3224 aaKnown RBP16.93■□□□□ 0.3
MBD1-220ENST00000589758 SYNRGQ9UMZ2 1314 aa16.93■□□□□ 0.3
MBD1-220ENST00000589758 ASB14A6NK59 587 aa16.92■□□□□ 0.3
MBD1-220ENST00000589758 CENPBP07199 599 aaPredicted RBP16.92■□□□□ 0.3
MBD1-220ENST00000589758 HAND2P61296 217 aa16.92■□□□□ 0.3
MBD1-220ENST00000589758 CCDC144BQ3MJ40 725 aa16.92■□□□□ 0.3
MBD1-220ENST00000589758 CCDC174Q6PII3 467 aa16.92■□□□□ 0.3
MBD1-220ENST00000589758 BTNL9Q6UXG8 535 aa16.92■□□□□ 0.3
MBD1-220ENST00000589758 ARMCX2Q7L311 632 aa16.92■□□□□ 0.3
MBD1-220ENST00000589758 KLHDC9Q8NEP7 349 aa16.92■□□□□ 0.3
MBD1-220ENST00000589758 FGD4Q96M96 766 aa16.92■□□□□ 0.3
MBD1-220ENST00000589758 TMEM47Q9BQJ4 181 aa16.92■□□□□ 0.3
MBD1-220ENST00000589758 A0A1W2PQ45 241 aaPredicted RBP16.91■□□□□ 0.3
MBD1-220ENST00000589758 A0A1W2PQY0 241 aa16.91■□□□□ 0.3
MBD1-220ENST00000589758 ZNF213O14771 459 aa16.91■□□□□ 0.3
MBD1-220ENST00000589758 ICAM1P05362 532 aa16.91■□□□□ 0.3
MBD1-220ENST00000589758 CST5P28325 142 aaPredicted RBP16.91■□□□□ 0.3
MBD1-220ENST00000589758 ACLYP53396 1101 aa16.91■□□□□ 0.3
MBD1-220ENST00000589758 TLE2Q04725 743 aa16.91■□□□□ 0.3
MBD1-220ENST00000589758 CCDC144CPQ8IYA2 1237 aa16.91■□□□□ 0.3
MBD1-220ENST00000589758 PCSK9Q8NBP7 692 aaKnown RBP16.91■□□□□ 0.3
MBD1-220ENST00000589758 LENG1Q96BZ8 264 aaPredicted RBP16.91■□□□□ 0.3
MBD1-220ENST00000589758 STARD7Q9NQZ5 370 aa16.91■□□□□ 0.3
MBD1-220ENST00000589758 PDLIM7Q9NR12 457 aa16.91■□□□□ 0.3
MBD1-220ENST00000589758 DIAPH3Q9NSV4 1193 aa16.91■□□□□ 0.3
MBD1-220ENST00000589758 CCPG1Q9ULG6 757 aa16.91■□□□□ 0.3
MBD1-220ENST00000589758 LTBP2Q14767 1821 aa16.91■□□□□ 0.3
MBD1-220ENST00000589758 GJA9P57773 515 aa16.9■□□□□ 0.3
MBD1-220ENST00000589758 CNTN2Q02246 1040 aa16.9■□□□□ 0.3
MBD1-220ENST00000589758 KCNA10Q16322 511 aa16.9■□□□□ 0.3
MBD1-220ENST00000589758 CCSAPQ6IQ19 270 aaPredicted RBP16.9■□□□□ 0.3
MBD1-220ENST00000589758 ESR2Q92731 530 aa16.9■□□□□ 0.3
MBD1-220ENST00000589758 RANBP17Q9H2T7 1088 aaKnown RBP16.9■□□□□ 0.3
MBD1-220ENST00000589758 PNMA2Q9UL42 364 aa16.9■□□□□ 0.3
MBD1-220ENST00000589758 SOWAHBA6NEL2 793 aa16.89■□□□□ 0.29
MBD1-220ENST00000589758 CLTBP09497 229 aa16.89■□□□□ 0.29
MBD1-220ENST00000589758 C6orf222P0C671 652 aaPredicted RBP16.89■□□□□ 0.29
MBD1-220ENST00000589758 SNAP25P60880 206 aa16.89■□□□□ 0.29
MBD1-220ENST00000589758 CCDC178Q5BJE1 867 aa16.89■□□□□ 0.29
MBD1-220ENST00000589758 MUM1L1Q5H9M0 696 aa16.89■□□□□ 0.29
MBD1-220ENST00000589758 SYDE2Q5VT97 1194 aa16.89■□□□□ 0.29
MBD1-220ENST00000589758 CWC27Q6UX04 472 aaKnown RBP16.89■□□□□ 0.29
MBD1-220ENST00000589758 RASGRP2Q7LDG7 609 aa16.89■□□□□ 0.29
MBD1-220ENST00000589758 TBC1D10CQ8IV04 446 aa16.89■□□□□ 0.29
MBD1-220ENST00000589758 BADQ92934 168 aa16.89■□□□□ 0.29
MBD1-220ENST00000589758 GLT1D1Q96MS3 346 aa16.89■□□□□ 0.29
MBD1-220ENST00000589758 TOX2Q96NM4 488 aa16.89■□□□□ 0.29
MBD1-220ENST00000589758 KATNBL1Q9H079 304 aa16.89■□□□□ 0.29
MBD1-220ENST00000589758 UPF3AQ9H1J1 476 aaKnown RBP16.89■□□□□ 0.29
MBD1-220ENST00000589758 CYP39A1Q9NYL5 469 aa16.89■□□□□ 0.29
MBD1-220ENST00000589758 MCM3APO60318 1980 aa16.89■□□□□ 0.29
MBD1-220ENST00000589758 DCDC2CA8MYV0 355 aa16.88■□□□□ 0.29
MBD1-220ENST00000589758 PDHBP11177 359 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms