RNA–Protein interactions for RNA: ENST00000589250.5

SEPT9-225, Transcript of septin 9, human

TSL 2

Gene SEPT9, Length 527 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEPT9-225	ENST00000589250	TRERF1	Q96PN7	1200 aa		11.13	□□□□□ -0.63
SEPT9-225	ENST00000589250	NEK1	Q96PY6	1258 aa		11.13	□□□□□ -0.63
SEPT9-225	ENST00000589250	UBA5	Q9GZZ9	404 aa		11.13	□□□□□ -0.63
SEPT9-225	ENST00000589250	UNC93B1	Q9H1C4	597 aa		11.13	□□□□□ -0.63
SEPT9-225	ENST00000589250	RANBP17	Q9H2T7	1088 aa	Known RBP	11.13	□□□□□ -0.63
SEPT9-225	ENST00000589250	SENP2	Q9HC62	589 aa		11.13	□□□□□ -0.63
SEPT9-225	ENST00000589250	HOMER2	Q9NSB8	354 aa		11.13	□□□□□ -0.63
SEPT9-225	ENST00000589250	PNMA2	Q9UL42	364 aa		11.13	□□□□□ -0.63
SEPT9-225	ENST00000589250	CCPG1	Q9ULG6	757 aa		11.13	□□□□□ -0.63
SEPT9-225	ENST00000589250	COL11A1	P12107	1806 aa	Predicted RBP	11.12	□□□□□ -0.63
SEPT9-225	ENST00000589250	POTEF	A5A3E0	1075 aa		11.12	□□□□□ -0.63
SEPT9-225	ENST00000589250	EPB41L2	O43491	1005 aa	Known RBP	11.12	□□□□□ -0.63
SEPT9-225	ENST00000589250	DHX16	O60231	1041 aa	Known RBP	11.12	□□□□□ -0.63
SEPT9-225	ENST00000589250	ICAM1	P05362	532 aa		11.12	□□□□□ -0.63
SEPT9-225	ENST00000589250	PGK2	P07205	417 aa		11.12	□□□□□ -0.63
SEPT9-225	ENST00000589250	GJB1	P08034	283 aa		11.12	□□□□□ -0.63
SEPT9-225	ENST00000589250	ALAS1	P13196	640 aa		11.12	□□□□□ -0.63
SEPT9-225	ENST00000589250	PRKAR2A	P13861	404 aa	Known RBP	11.12	□□□□□ -0.63
SEPT9-225	ENST00000589250	HSPA4	P34932	840 aa		11.12	□□□□□ -0.63
SEPT9-225	ENST00000589250	OLFML2B	Q68BL8	750 aa		11.12	□□□□□ -0.63
SEPT9-225	ENST00000589250	NFXL1	Q6ZNB6	911 aa		11.12	□□□□□ -0.63
SEPT9-225	ENST00000589250	CPVL	Q9H3G5	476 aa		11.12	□□□□□ -0.63
SEPT9-225	ENST00000589250	ACAD9	Q9H845	621 aa		11.12	□□□□□ -0.63
SEPT9-225	ENST00000589250	LY9	Q9HBG7	655 aa		11.12	□□□□□ -0.63
SEPT9-225	ENST00000589250	HMX1	Q9NP08	348 aa	Predicted RBP	11.12	□□□□□ -0.63
SEPT9-225	ENST00000589250	RNF146	Q9NTX7	359 aa		11.12	□□□□□ -0.63
SEPT9-225	ENST00000589250	PLXNB2	O15031	1838 aa		11.12	□□□□□ -0.63
SEPT9-225	ENST00000589250	RPTOR	Q8N122	1335 aa		11.11	□□□□□ -0.63
SEPT9-225	ENST00000589250	CCDC69	A6NI79	296 aa		11.11	□□□□□ -0.63
SEPT9-225	ENST00000589250	KLRF2	D3W0D1	207 aa		11.11	□□□□□ -0.63
SEPT9-225	ENST00000589250	SH2B2	O14492	632 aa	Predicted RBP	11.11	□□□□□ -0.63
SEPT9-225	ENST00000589250	HMGB1	P09429	215 aa	Known RBP	11.11	□□□□□ -0.63
SEPT9-225	ENST00000589250	EN2	P19622	333 aa	Predicted RBP	11.11	□□□□□ -0.63
SEPT9-225	ENST00000589250	LIFR	P42702	1097 aa		11.11	□□□□□ -0.63
SEPT9-225	ENST00000589250	RGS19	P49795	217 aa		11.11	□□□□□ -0.63
SEPT9-225	ENST00000589250	CACNB2	Q08289	660 aa	Predicted RBP	11.11	□□□□□ -0.63
SEPT9-225	ENST00000589250	TROAP	Q12815	778 aa		11.11	□□□□□ -0.63
SEPT9-225	ENST00000589250	GRM4	Q14833	912 aa		11.11	□□□□□ -0.63
SEPT9-225	ENST00000589250	ADCK5	Q3MIX3	580 aa		11.11	□□□□□ -0.63
SEPT9-225	ENST00000589250	MAP3K21	Q5TCX8	1036 aa		11.11	□□□□□ -0.63
SEPT9-225	ENST00000589250	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.11	□□□□□ -0.63
SEPT9-225	ENST00000589250	DHX32	Q7L7V1	743 aa	Known RBP	11.11	□□□□□ -0.63
SEPT9-225	ENST00000589250	ADGRF4	Q8IZF3	695 aa		11.11	□□□□□ -0.63
SEPT9-225	ENST00000589250	STAG2	Q8N3U4	1231 aa		11.11	□□□□□ -0.63
SEPT9-225	ENST00000589250	NUP133	Q8WUM0	1156 aa		11.11	□□□□□ -0.63
SEPT9-225	ENST00000589250	KCNB2	Q92953	911 aa		11.11	□□□□□ -0.63
SEPT9-225	ENST00000589250	MAML3	Q96JK9	1138 aa		11.11	□□□□□ -0.63
SEPT9-225	ENST00000589250	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	11.11	□□□□□ -0.63	5e-6	■■■□□ 17.3
SEPT9-225	ENST00000589250	VAT1L	Q9HCJ6	419 aa		11.11	□□□□□ -0.63
SEPT9-225	ENST00000589250	GPHN	Q9NQX3	736 aa	Predicted RBP	11.11	□□□□□ -0.63
SEPT9-225	ENST00000589250	FLRT1	Q9NZU1	646 aa		11.11	□□□□□ -0.63
SEPT9-225	ENST00000589250	MAD2L2	Q9UI95	211 aa		11.11	□□□□□ -0.63
SEPT9-225	ENST00000589250	DIS3	Q9Y2L1	958 aa	Known RBP	11.11	□□□□□ -0.63
SEPT9-225	ENST00000589250	PALM3	A6NDB9	673 aa	Predicted RBP	11.1	□□□□□ -0.63
SEPT9-225	ENST00000589250	DDAH1	O94760	285 aa		11.1	□□□□□ -0.63
SEPT9-225	ENST00000589250	CYP2C19	P33261	490 aa		11.1	□□□□□ -0.63
SEPT9-225	ENST00000589250	GJA8	P48165	433 aa		11.1	□□□□□ -0.63
SEPT9-225	ENST00000589250	EXOSC10	Q01780	885 aa	Known RBP	11.1	□□□□□ -0.63
SEPT9-225	ENST00000589250	COL9A3	Q14050	684 aa	Predicted RBP	11.1	□□□□□ -0.63
SEPT9-225	ENST00000589250	CDC37	Q16543	378 aa	Predicted RBP	11.1	□□□□□ -0.63
SEPT9-225	ENST00000589250	ZNF792	Q3KQV3	632 aa		11.1	□□□□□ -0.63
SEPT9-225	ENST00000589250	ZNF654	Q8IZM8	581 aa		11.1	□□□□□ -0.63
SEPT9-225	ENST00000589250	U2AF1L4	Q8WU68	220 aa	Known RBP	11.1	□□□□□ -0.63
SEPT9-225	ENST00000589250	JAKMIP1	Q96N16	626 aa	Known RBP	11.1	□□□□□ -0.63
SEPT9-225	ENST00000589250	DEFB118	Q96PH6	123 aa		11.1	□□□□□ -0.63
SEPT9-225	ENST00000589250	USP26	Q9BXU7	913 aa		11.1	□□□□□ -0.63
SEPT9-225	ENST00000589250	LRRC2	Q9BYS8	371 aa		11.1	□□□□□ -0.63
SEPT9-225	ENST00000589250	JMJD4	Q9H9V9	463 aa		11.1	□□□□□ -0.63
SEPT9-225	ENST00000589250	PAK6	Q9NQU5	681 aa	Predicted RBP	11.1	□□□□□ -0.63
SEPT9-225	ENST00000589250	SNX14	Q9Y5W7	946 aa		11.1	□□□□□ -0.63
SEPT9-225	ENST00000589250	SLC12A7	Q9Y666	1083 aa		11.1	□□□□□ -0.63
SEPT9-225	ENST00000589250	WDR19	Q8NEZ3	1342 aa		11.09	□□□□□ -0.63
SEPT9-225	ENST00000589250	DNAJC25-GNG10	A0A024R161	153 aa		11.09	□□□□□ -0.63
SEPT9-225	ENST00000589250	POTEB2	H3BUK9	544 aa		11.09	□□□□□ -0.63
SEPT9-225	ENST00000589250	EIF5B	O60841	1220 aa	Known RBP	11.09	□□□□□ -0.63
SEPT9-225	ENST00000589250	SGPL1	O95470	568 aa		11.09	□□□□□ -0.63
SEPT9-225	ENST00000589250	CAPN2	P17655	700 aa		11.09	□□□□□ -0.63
SEPT9-225	ENST00000589250	PSMA5	P28066	241 aa		11.09	□□□□□ -0.63
SEPT9-225	ENST00000589250	KIF5B	P33176	963 aa		11.09	□□□□□ -0.63
SEPT9-225	ENST00000589250	FGD1	P98174	961 aa		11.09	□□□□□ -0.63
SEPT9-225	ENST00000589250	MLLT1	Q03111	559 aa	Predicted RBP	11.09	□□□□□ -0.63
SEPT9-225	ENST00000589250	USH1G	Q495M9	461 aa		11.09	□□□□□ -0.63
SEPT9-225	ENST00000589250	MUM1L1	Q5H9M0	696 aa		11.09	□□□□□ -0.63
SEPT9-225	ENST00000589250	NSMF	Q6X4W1	530 aa		11.09	□□□□□ -0.63
SEPT9-225	ENST00000589250	SYNE3	Q6ZMZ3	975 aa		11.09	□□□□□ -0.63
SEPT9-225	ENST00000589250	SGMS1	Q86VZ5	419 aa		11.09	□□□□□ -0.63
SEPT9-225	ENST00000589250	CTCFL	Q8NI51	663 aa	Predicted RBP	11.09	□□□□□ -0.63
SEPT9-225	ENST00000589250	TCEANC2	Q96MN5	208 aa		11.09	□□□□□ -0.63
SEPT9-225	ENST00000589250	MAP3K14	Q99558	947 aa		11.09	□□□□□ -0.63
SEPT9-225	ENST00000589250	TINF2	Q9BSI4	451 aa		11.09	□□□□□ -0.63
SEPT9-225	ENST00000589250	MYL10	Q9BUA6	226 aa		11.09	□□□□□ -0.63
SEPT9-225	ENST00000589250	A1CF	Q9NQ94	594 aa	Known RBP	11.09	□□□□□ -0.63
SEPT9-225	ENST00000589250	PFAS	O15067	1338 aa		11.09	□□□□□ -0.63
SEPT9-225	ENST00000589250	ZBTB5	O15062	677 aa		11.08	□□□□□ -0.64
SEPT9-225	ENST00000589250	IGHA2	P01877	340 aa		11.08	□□□□□ -0.64
SEPT9-225	ENST00000589250	TFRC	P02786	760 aa	Known RBP	11.08	□□□□□ -0.64
SEPT9-225	ENST00000589250	CALM1	P0DP23	149 aa		11.08	□□□□□ -0.64
SEPT9-225	ENST00000589250	CALM2	P0DP24	149 aa		11.08	□□□□□ -0.64
SEPT9-225	ENST00000589250	CALM3	P0DP25	149 aa		11.08	□□□□□ -0.64
SEPT9-225	ENST00000589250	TAL1	P17542	331 aa	Predicted RBP	11.08	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms