RNA–Protein interactions for RNA: ENST00000589239.5

RFX1-205, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 2,122 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-205ENST00000589239 SH3GLB2Q9NR46 395 aa28.49■■■□□ 2.15
RFX1-205ENST00000589239 NLRP5P59047 1200 aa28.48■■■□□ 2.15
RFX1-205ENST00000589239 FOXD4L6Q3SYB3 417 aaPredicted RBP28.48■■■□□ 2.15
RFX1-205ENST00000589239 CCDC174Q6PII3 467 aa28.48■■■□□ 2.15
RFX1-205ENST00000589239 FOXD4L3Q6VB84 417 aaPredicted RBP28.48■■■□□ 2.15
RFX1-205ENST00000589239 TAL1P17542 331 aaPredicted RBP28.48■■■□□ 2.15
RFX1-205ENST00000589239 ZNF157P51786 506 aaPredicted RBP28.48■■■□□ 2.15
RFX1-205ENST00000589239 LOC285556D6RIA3 1793 aa28.48■■■□□ 2.15
RFX1-205ENST00000589239 ZBTB48P10074 688 aaPredicted RBP28.47■■■□□ 2.15
RFX1-205ENST00000589239 FSTL1Q12841 308 aa28.47■■■□□ 2.15
RFX1-205ENST00000589239 COG2Q14746 738 aa28.47■■■□□ 2.15
RFX1-205ENST00000589239 FASTKD5Q7L8L6 764 aaKnown RBP28.47■■■□□ 2.15
RFX1-205ENST00000589239 ATG4CQ96DT6 458 aa28.47■■■□□ 2.15
RFX1-205ENST00000589239 MS4A4AQ96JQ5 239 aa28.47■■■□□ 2.15
RFX1-205ENST00000589239 PCDHA1Q9Y5I3 950 aa28.47■■■□□ 2.15
RFX1-205ENST00000589239 TLL2Q9Y6L7 1015 aa28.47■■■□□ 2.15
RFX1-205ENST00000589239 KIF28PB7ZC32 967 aa28.46■■■□□ 2.15
RFX1-205ENST00000589239 hCG_1984214I3L0E3 225 aa28.46■■■□□ 2.15
RFX1-205ENST00000589239 KIF23Q02241 960 aaPredicted RBP28.46■■■□□ 2.15
RFX1-205ENST00000589239 NPY5RQ15761 445 aa28.46■■■□□ 2.15
RFX1-205ENST00000589239 USH1GQ495M9 461 aa28.46■■■□□ 2.15
RFX1-205ENST00000589239 DIS3L2Q8IYB7 885 aaKnown RBP28.46■■■□□ 2.15
RFX1-205ENST00000589239 ZNF713Q8N859 430 aaPredicted RBP28.46■■■□□ 2.15
RFX1-205ENST00000589239 CCDC148Q8NFR7 591 aa28.46■■■□□ 2.15
RFX1-205ENST00000589239 AMNQ9BXJ7 453 aa28.46■■■□□ 2.15
RFX1-205ENST00000589239 AGTPBP1Q9UPW5 1226 aa28.46■■■□□ 2.15
RFX1-205ENST00000589239 TMEM88BA6NKF7 163 aa28.46■■■□□ 2.15
RFX1-205ENST00000589239 BTBD18B2RXH4 712 aa28.46■■■□□ 2.15
RFX1-205ENST00000589239 RESTQ13127 1097 aa28.46■■■□□ 2.15
RFX1-205ENST00000589239 L1TD1Q5T7N2 865 aaKnown RBP28.46■■■□□ 2.15
RFX1-205ENST00000589239 RGMBQ6NW40 437 aa28.46■■■□□ 2.15
RFX1-205ENST00000589239 FBXO11Q86XK2 927 aa28.46■■■□□ 2.15
RFX1-205ENST00000589239 OXER1Q8TDS5 423 aa28.46■■■□□ 2.15
RFX1-205ENST00000589239 CHAMP1Q96JM3 812 aa28.46■■■□□ 2.15
RFX1-205ENST00000589239 ABT1Q9ULW3 272 aaKnown RBP28.46■■■□□ 2.15
RFX1-205ENST00000589239 DSG3P32926 999 aa28.45■■■□□ 2.15
RFX1-205ENST00000589239 GTF2A2P52657 109 aa28.45■■■□□ 2.15
RFX1-205ENST00000589239 SAFBQ15424 915 aaKnown RBP eCLIP28.45■■■□□ 2.15
RFX1-205ENST00000589239 RASAL3Q86YV0 1011 aa28.45■■■□□ 2.15
RFX1-205ENST00000589239 SLC38A10Q9HBR0 1119 aa28.45■■■□□ 2.15
RFX1-205ENST00000589239 ADAMTS3O15072 1205 aa28.45■■■□□ 2.14
RFX1-205ENST00000589239 HOXA7P31268 230 aaPredicted RBP28.45■■■□□ 2.14
RFX1-205ENST00000589239 GPAT2Q6NUI2 795 aa28.45■■■□□ 2.14
RFX1-205ENST00000589239 FAM173BQ6P4H8 233 aa28.45■■■□□ 2.14
RFX1-205ENST00000589239 CCDC12Q8WUD4 166 aaPredicted RBP28.45■■■□□ 2.14
RFX1-205ENST00000589239 PARP14Q460N5 1801 aa28.44■■■□□ 2.14
RFX1-205ENST00000589239 VWA5AO00534 786 aa28.44■■■□□ 2.14
RFX1-205ENST00000589239 NR5A1Q13285 461 aa28.44■■■□□ 2.14
RFX1-205ENST00000589239 ZMYND12Q9H0C1 365 aa28.44■■■□□ 2.14
RFX1-205ENST00000589239 ZNF536O15090 1300 aa28.43■■■□□ 2.14
RFX1-205ENST00000589239 RLFQ13129 1914 aa28.43■■■□□ 2.14
RFX1-205ENST00000589239 CCL15-CCL14A0A0B4J2E2 113 aa28.43■■■□□ 2.14
RFX1-205ENST00000589239 SMCO2A6NFE2 343 aa28.43■■■□□ 2.14
RFX1-205ENST00000589239 GNL2Q13823 731 aaKnown RBP28.43■■■□□ 2.14
RFX1-205ENST00000589239 CCL15Q16663 113 aa28.43■■■□□ 2.14
RFX1-205ENST00000589239 SPDYE16A6NNV3 312 aaPredicted RBP28.43■■■□□ 2.14
RFX1-205ENST00000589239 CETPP11597 493 aa28.43■■■□□ 2.14
RFX1-205ENST00000589239 KRT2P35908 639 aa28.43■■■□□ 2.14
RFX1-205ENST00000589239 ZSCAN16Q9H4T2 348 aaPredicted RBP28.43■■■□□ 2.14
RFX1-205ENST00000589239 HOXC10Q9NYD6 342 aa28.43■■■□□ 2.14
RFX1-205ENST00000589239 CPXCR1Q8N123 301 aa28.42■■■□□ 2.14
RFX1-205ENST00000589239 BRI3BPQ8WY22 251 aa28.42■■■□□ 2.14
RFX1-205ENST00000589239 PCDHA4Q9UN74 947 aa28.42■■■□□ 2.14
RFX1-205ENST00000589239 ADAMTS5Q9UNA0 930 aa28.42■■■□□ 2.14
RFX1-205ENST00000589239 ZBED4O75132 1171 aa28.42■■■□□ 2.14
RFX1-205ENST00000589239 U2AF2P26368 475 aaKnown RBP eCLIP28.42■■■□□ 2.14
RFX1-205ENST00000589239 CALML3P27482 149 aa28.42■■■□□ 2.14
RFX1-205ENST00000589239 IRX3P78415 501 aaPredicted RBP28.42■■■□□ 2.14
RFX1-205ENST00000589239 AGBL1Q96MI9 1066 aa28.42■■■□□ 2.14
RFX1-205ENST00000589239 ASCC2Q9H1I8 757 aaPredicted RBP28.42■■■□□ 2.14
RFX1-205ENST00000589239 RAVER2Q9HCJ3 691 aaKnown RBP28.42■■■□□ 2.14
RFX1-205ENST00000589239 PPP1R18Q6NYC8 613 aa28.41■■■□□ 2.14
RFX1-205ENST00000589239 FAM177A1Q8N128 213 aaPredicted RBP28.41■■■□□ 2.14
RFX1-205ENST00000589239 FOXP1Q9H334 677 aaPredicted RBP28.41■■■□□ 2.14
RFX1-205ENST00000589239 BRMS1Q9HCU9 246 aa28.41■■■□□ 2.14
RFX1-205ENST00000589239 MYPNQ86TC9 1320 aa28.41■■■□□ 2.14
RFX1-205ENST00000589239 ICAM1P05362 532 aa28.4■■■□□ 2.14
RFX1-205ENST00000589239 P2RX7Q99572 595 aaKnown RBP28.4■■■□□ 2.14
RFX1-205ENST00000589239 C6orf50Q9HD87 102 aa28.4■■■□□ 2.14
RFX1-205ENST00000589239 CTDP1Q9Y5B0 961 aaPredicted RBP28.4■■■□□ 2.14
RFX1-205ENST00000589239 ESYT2A0FGR8 921 aa28.4■■■□□ 2.14
RFX1-205ENST00000589239 BLIDQ8IZY5 108 aa28.4■■■□□ 2.14
RFX1-205ENST00000589239 REPS2Q8NFH8 660 aa28.4■■■□□ 2.14
RFX1-205ENST00000589239 CCPG1Q9ULG6 757 aa28.4■■■□□ 2.14
RFX1-205ENST00000589239 FDX1P10109 184 aa28.39■■■□□ 2.14
RFX1-205ENST00000589239 GNA11P29992 359 aa28.39■■■□□ 2.14
RFX1-205ENST00000589239 NOSTRINQ8IVI9 506 aa28.39■■■□□ 2.14
RFX1-205ENST00000589239 RASGRP4Q8TDF6 673 aa28.39■■■□□ 2.14
RFX1-205ENST00000589239 ATP6V1DQ9Y5K8 247 aa28.39■■■□□ 2.14
RFX1-205ENST00000589239 SMCHD1A6NHR9 2005 aa28.39■■■□□ 2.13
RFX1-205ENST00000589239 SLC10A3P09131 477 aa28.39■■■□□ 2.13
RFX1-205ENST00000589239 PABPC4Q13310 644 aaKnown RBP eCLIP28.39■■■□□ 2.13
RFX1-205ENST00000589239 GALNT17Q6IS24 598 aa28.39■■■□□ 2.13
RFX1-205ENST00000589239 POTEEQ6S8J3 1075 aa28.39■■■□□ 2.13
RFX1-205ENST00000589239 BTBD19C9JJ37 291 aa28.38■■■□□ 2.13
RFX1-205ENST00000589239 ADCY7P51828 1080 aa28.38■■■□□ 2.13
RFX1-205ENST00000589239 DAGLBQ8NCG7 672 aa28.38■■■□□ 2.13
RFX1-205ENST00000589239 TMEM132BQ14DG7 1078 aa28.37■■■□□ 2.13
RFX1-205ENST00000589239 NOM1Q5C9Z4 860 aaKnown RBP28.37■■■□□ 2.13
RFX1-205ENST00000589239 EARS2Q5JPH6 523 aaKnown RBP28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms