RNA–Protein interactions for RNA: ENST00000589165.5

ERCC1-208, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene ERCC1, Length 1,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-208ENST00000589165 KAT14Q9H8E8 782 aa16.27■□□□□ 0.19
ERCC1-208ENST00000589165 NRBP1Q9UHY1 535 aa16.27■□□□□ 0.19
ERCC1-208ENST00000589165 FRMPD2Q68DX3 1309 aaPredicted RBP16.26■□□□□ 0.19
ERCC1-208ENST00000589165 MSCO60682 206 aa16.26■□□□□ 0.19
ERCC1-208ENST00000589165 SLC16A2P36021 539 aa16.26■□□□□ 0.19
ERCC1-208ENST00000589165 PRPF38BQ5VTL8 546 aaKnown RBP16.26■□□□□ 0.19
ERCC1-208ENST00000589165 MSL3Q8N5Y2 521 aaKnown RBP16.26■□□□□ 0.19
ERCC1-208ENST00000589165 TRPV1Q8NER1 839 aa16.26■□□□□ 0.19
ERCC1-208ENST00000589165 DDX11Q96FC9 970 aa16.26■□□□□ 0.19
ERCC1-208ENST00000589165 TINF2Q9BSI4 451 aa16.26■□□□□ 0.19
ERCC1-208ENST00000589165 ACAD9Q9H845 621 aa16.26■□□□□ 0.19
ERCC1-208ENST00000589165 GPCPD1Q9NPB8 672 aa16.26■□□□□ 0.19
ERCC1-208ENST00000589165 RBM8AQ9Y5S9 174 aaKnown RBP16.26■□□□□ 0.19
ERCC1-208ENST00000589165 E7EWF7 191 aa16.25■□□□□ 0.19
ERCC1-208ENST00000589165 ICAM1P05362 532 aa16.25■□□□□ 0.19
ERCC1-208ENST00000589165 SLC4A3P48751 1232 aa16.25■□□□□ 0.19
ERCC1-208ENST00000589165 MNX1P50219 401 aaPredicted RBP16.25■□□□□ 0.19
ERCC1-208ENST00000589165 SEC23AQ15436 765 aa16.25■□□□□ 0.19
ERCC1-208ENST00000589165 CYB5R4Q7L1T6 521 aa16.25■□□□□ 0.19
ERCC1-208ENST00000589165 ZNF467Q7Z7K2 595 aaPredicted RBP16.25■□□□□ 0.19
ERCC1-208ENST00000589165 ANKRD35Q8N283 1001 aa16.25■□□□□ 0.19
ERCC1-208ENST00000589165 NCOA7Q8NI08 942 aa16.25■□□□□ 0.19
ERCC1-208ENST00000589165 DDX20Q9UHI6 824 aaKnown RBP16.25■□□□□ 0.19
ERCC1-208ENST00000589165 PNMA2Q9UL42 364 aa16.25■□□□□ 0.19
ERCC1-208ENST00000589165 TAF6LQ9Y6J9 622 aa16.25■□□□□ 0.19
ERCC1-208ENST00000589165 CCDC174Q6PII3 467 aa16.24■□□□□ 0.19
ERCC1-208ENST00000589165 MAMDC4Q6UXC1 1216 aa16.24■□□□□ 0.19
ERCC1-208ENST00000589165 NECAB2Q7Z6G3 386 aa16.24■□□□□ 0.19
ERCC1-208ENST00000589165 RALYLQ86SE5 291 aaKnown RBP16.24■□□□□ 0.19
ERCC1-208ENST00000589165 TRERF1Q96PN7 1200 aa16.24■□□□□ 0.19
ERCC1-208ENST00000589165 HTATIP2Q9BUP3 242 aa16.24■□□□□ 0.19
ERCC1-208ENST00000589165 HOMER2Q9NSB8 354 aa16.24■□□□□ 0.19
ERCC1-208ENST00000589165 RNF146Q9NTX7 359 aa16.24■□□□□ 0.19
ERCC1-208ENST00000589165 SYNGAP1Q96PV0 1343 aa16.24■□□□□ 0.19
ERCC1-208ENST00000589165 SEPT4O43236 478 aa16.23■□□□□ 0.19
ERCC1-208ENST00000589165 CDC45O75419 566 aa16.23■□□□□ 0.19
ERCC1-208ENST00000589165 SNAP25P60880 206 aa16.23■□□□□ 0.19
ERCC1-208ENST00000589165 ASPRV1Q53RT3 343 aa16.23■□□□□ 0.19
ERCC1-208ENST00000589165 IFIT1BQ5T764 474 aaKnown RBP16.23■□□□□ 0.19
ERCC1-208ENST00000589165 CASC1Q6TDU7 716 aa16.23■□□□□ 0.19
ERCC1-208ENST00000589165 STOX1Q6ZVD7 989 aa16.23■□□□□ 0.19
ERCC1-208ENST00000589165 PAWRQ96IZ0 340 aaKnown RBP16.23■□□□□ 0.19
ERCC1-208ENST00000589165 ANO2Q9NQ90 1003 aa16.23■□□□□ 0.19
ERCC1-208ENST00000589165 CCPG1Q9ULG6 757 aa16.23■□□□□ 0.19
ERCC1-208ENST00000589165 PFASO15067 1338 aa16.23■□□□□ 0.19
ERCC1-208ENST00000589165 GOLGA8HP0CJ92 632 aa16.22■□□□□ 0.19
ERCC1-208ENST00000589165 ALAS1P13196 640 aa16.22■□□□□ 0.19
ERCC1-208ENST00000589165 CNGA1P29973 690 aa16.22■□□□□ 0.19
ERCC1-208ENST00000589165 NECTIN1Q15223 517 aa16.22■□□□□ 0.19
ERCC1-208ENST00000589165 DIS3LQ8TF46 1054 aaKnown RBP16.22■□□□□ 0.19
ERCC1-208ENST00000589165 A1CFQ9NQ94 594 aaKnown RBP16.22■□□□□ 0.19
ERCC1-208ENST00000589165 WDR19Q8NEZ3 1342 aa16.22■□□□□ 0.19
ERCC1-208ENST00000589165 SART3Q15020 963 aaKnown RBP16.22■□□□□ 0.19
ERCC1-208ENST00000589165 MB21D2Q8IYB1 491 aaPredicted RBP16.22■□□□□ 0.19
ERCC1-208ENST00000589165 FAM133AQ8N9E0 248 aa16.22■□□□□ 0.19
ERCC1-208ENST00000589165 FGD4Q96M96 766 aa16.22■□□□□ 0.19
ERCC1-208ENST00000589165 CEP290O15078 2479 aa16.21■□□□□ 0.19
ERCC1-208ENST00000589165 ERICH2A1L162 156 aa16.21■□□□□ 0.19
ERCC1-208ENST00000589165 IFIT3O14879 490 aaKnown RBP16.21■□□□□ 0.19
ERCC1-208ENST00000589165 PARP1P09874 1014 aaKnown RBP16.21■□□□□ 0.19
ERCC1-208ENST00000589165 ZNF865P0CJ78 1059 aaPredicted RBP16.21■□□□□ 0.19
ERCC1-208ENST00000589165 COL6A1P12109 1028 aa16.21■□□□□ 0.19
ERCC1-208ENST00000589165 MUM1L1Q5H9M0 696 aa16.21■□□□□ 0.19
ERCC1-208ENST00000589165 PRAMEF19Q5SWL8 479 aa16.21■□□□□ 0.19
ERCC1-208ENST00000589165 MTA3Q9BTC8 594 aa16.21■□□□□ 0.19
ERCC1-208ENST00000589165 PPP4R2Q9NY27 417 aa16.21■□□□□ 0.19
ERCC1-208ENST00000589165 CYP39A1Q9NYL5 469 aa16.21■□□□□ 0.19
ERCC1-208ENST00000589165 CNPY2Q9Y2B0 182 aa16.21■□□□□ 0.19
ERCC1-208ENST00000589165 POTEB2H3BUK9 544 aa16.2■□□□□ 0.18
ERCC1-208ENST00000589165 SLC27A2O14975 620 aa16.2■□□□□ 0.18
ERCC1-208ENST00000589165 SNAI1O95863 264 aaPredicted RBP16.2■□□□□ 0.18
ERCC1-208ENST00000589165 ANTXR2P58335 489 aa16.2■□□□□ 0.18
ERCC1-208ENST00000589165 CREB3L3Q68CJ9 461 aa16.2■□□□□ 0.18
ERCC1-208ENST00000589165 DPF3Q92784 378 aa16.2■□□□□ 0.18
ERCC1-208ENST00000589165 UBA5Q9GZZ9 404 aa16.2■□□□□ 0.18
ERCC1-208ENST00000589165 C11orf49Q9H6J7 331 aa16.2■□□□□ 0.18
ERCC1-208ENST00000589165 TAL1P17542 331 aaPredicted RBP16.19■□□□□ 0.18
ERCC1-208ENST00000589165 CNTN2Q02246 1040 aa16.19■□□□□ 0.18
ERCC1-208ENST00000589165 WTAPQ15007 396 aa16.19■□□□□ 0.18
ERCC1-208ENST00000589165 ADGRF4Q8IZF3 695 aa16.19■□□□□ 0.18
ERCC1-208ENST00000589165 IGDCC4Q8TDY8 1250 aa16.19■□□□□ 0.18
ERCC1-208ENST00000589165 MAF1Q9H063 256 aa16.19■□□□□ 0.18
ERCC1-208ENST00000589165 PALM3A6NDB9 673 aaPredicted RBP16.18■□□□□ 0.18
ERCC1-208ENST00000589165 DNM1LO00429 736 aa16.18■□□□□ 0.18
ERCC1-208ENST00000589165 TROAPQ12815 778 aa16.18■□□□□ 0.18
ERCC1-208ENST00000589165 TMEM67Q5HYA8 995 aa16.18■□□□□ 0.18
ERCC1-208ENST00000589165 RNF20Q5VTR2 975 aa16.18■□□□□ 0.18
ERCC1-208ENST00000589165 CHST3Q7LGC8 479 aa16.18■□□□□ 0.18
ERCC1-208ENST00000589165 ARRDC4Q8NCT1 418 aa16.18■□□□□ 0.18
ERCC1-208ENST00000589165 CLEC4DQ8WXI8 215 aa16.18■□□□□ 0.18
ERCC1-208ENST00000589165 CPVLQ9H3G5 476 aa16.18■□□□□ 0.18
ERCC1-208ENST00000589165 ABHD16BQ9H3Z7 469 aa16.18■□□□□ 0.18
ERCC1-208ENST00000589165 SENP2Q9HC62 589 aa16.18■□□□□ 0.18
ERCC1-208ENST00000589165 MAD2L2Q9UI95 211 aa16.18■□□□□ 0.18
ERCC1-208ENST00000589165 ZNFX1Q9P2E3 1918 aaKnown RBP16.17■□□□□ 0.18
ERCC1-208ENST00000589165 SOWAHBA6NEL2 793 aa16.17■□□□□ 0.18
ERCC1-208ENST00000589165 ASB14A6NK59 587 aa16.17■□□□□ 0.18
ERCC1-208ENST00000589165 NFIBO00712 420 aa16.17■□□□□ 0.18
ERCC1-208ENST00000589165 AKR1A1P14550 325 aa16.17■□□□□ 0.18
ERCC1-208ENST00000589165 MCM5P33992 734 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms