RNA–Protein interactions for RNA: ENST00000589064.5

MBD3-205, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 1,475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-205ENST00000589064 SKAP1Q86WV1 359 aa24.37■■□□□ 1.49
MBD3-205ENST00000589064 TRERF1Q96PN7 1200 aa24.37■■□□□ 1.49
MBD3-205ENST00000589064 ZSCAN10Q96SZ4 725 aaPredicted RBP24.37■■□□□ 1.49
MBD3-205ENST00000589064 KRT23Q9C075 422 aa24.37■■□□□ 1.49
MBD3-205ENST00000589064 ACAD9Q9H845 621 aa24.37■■□□□ 1.49
MBD3-205ENST00000589064 RNF146Q9NTX7 359 aa24.37■■□□□ 1.49
MBD3-205ENST00000589064 PFASO15067 1338 aa24.36■■□□□ 1.49
MBD3-205ENST00000589064 ZNF236Q9UL36 1845 aa24.36■■□□□ 1.49
MBD3-205ENST00000589064 COL6A1P12109 1028 aa24.36■■□□□ 1.49
MBD3-205ENST00000589064 TKFCQ3LXA3 575 aa24.36■■□□□ 1.49
MBD3-205ENST00000589064 CNNM2Q9H8M5 875 aa24.36■■□□□ 1.49
MBD3-205ENST00000589064 NRBP1Q9UHY1 535 aa24.36■■□□□ 1.49
MBD3-205ENST00000589064 COL11A1P12107 1806 aaPredicted RBP24.36■■□□□ 1.49
MBD3-205ENST00000589064 SNHG28P0DPA3 235 aa24.35■■□□□ 1.49
MBD3-205ENST00000589064 ZNF543Q08ER8 600 aa24.35■■□□□ 1.49
MBD3-205ENST00000589064 ANKS1AQ92625 1134 aa24.35■■□□□ 1.49
MBD3-205ENST00000589064 SNAI1O95863 264 aaPredicted RBP24.34■■□□□ 1.49
MBD3-205ENST00000589064 CNTN2Q02246 1040 aa24.34■■□□□ 1.49
MBD3-205ENST00000589064 GJC2Q5T442 439 aaPredicted RBP24.34■■□□□ 1.49
MBD3-205ENST00000589064 RANBP17Q9H2T7 1088 aaKnown RBP24.34■■□□□ 1.49
MBD3-205ENST00000589064 KAT14Q9H8E8 782 aa24.34■■□□□ 1.49
MBD3-205ENST00000589064 CCPG1Q9ULG6 757 aa24.34■■□□□ 1.49
MBD3-205ENST00000589064 COLQQ9Y215 455 aaPredicted RBP24.34■■□□□ 1.49
MBD3-205ENST00000589064 CNPY2Q9Y2B0 182 aa24.34■■□□□ 1.49
MBD3-205ENST00000589064 MYCNP04198 464 aaPredicted RBP24.33■■□□□ 1.49
MBD3-205ENST00000589064 ICAM1P05362 532 aa24.33■■□□□ 1.49
MBD3-205ENST00000589064 ZNF865P0CJ78 1059 aaPredicted RBP24.33■■□□□ 1.49
MBD3-205ENST00000589064 GOLGA8HP0CJ92 632 aa24.33■■□□□ 1.49
MBD3-205ENST00000589064 MUM1L1Q5H9M0 696 aa24.33■■□□□ 1.49
MBD3-205ENST00000589064 MAMDC4Q6UXC1 1216 aa24.33■■□□□ 1.49
MBD3-205ENST00000589064 MSL3Q8N5Y2 521 aaKnown RBP24.33■■□□□ 1.49
MBD3-205ENST00000589064 ENAHQ8N8S7 591 aaPredicted RBP24.33■■□□□ 1.49
MBD3-205ENST00000589064 ARRDC4Q8NCT1 418 aa24.33■■□□□ 1.49
MBD3-205ENST00000589064 PNMA1Q8ND90 353 aa24.33■■□□□ 1.49
MBD3-205ENST00000589064 SENP6Q9GZR1 1112 aaPredicted RBP24.33■■□□□ 1.49
MBD3-205ENST00000589064 A1CFQ9NQ94 594 aaKnown RBP24.33■■□□□ 1.49
MBD3-205ENST00000589064 U3KPZ7 1027 aaPredicted RBP24.33■■□□□ 1.49
MBD3-205ENST00000589064 POTEB2H3BUK9 544 aa24.32■■□□□ 1.48
MBD3-205ENST00000589064 CYP21A2P08686 494 aa24.32■■□□□ 1.48
MBD3-205ENST00000589064 ZNF467Q7Z7K2 595 aaPredicted RBP24.32■■□□□ 1.48
MBD3-205ENST00000589064 C7orf61Q8IZ16 206 aa24.32■■□□□ 1.48
MBD3-205ENST00000589064 FGD4Q96M96 766 aa24.32■■□□□ 1.48
MBD3-205ENST00000589064 TNKSO95271 1327 aa24.32■■□□□ 1.48
MBD3-205ENST00000589064 DNM1LO00429 736 aa24.32■■□□□ 1.48
MBD3-205ENST00000589064 HABP4Q5JVS0 413 aaKnown RBP24.32■■□□□ 1.48
MBD3-205ENST00000589064 CYB5R4Q7L1T6 521 aa24.32■■□□□ 1.48
MBD3-205ENST00000589064 UBAC1Q9BSL1 405 aa24.32■■□□□ 1.48
MBD3-205ENST00000589064 UBA5Q9GZZ9 404 aa24.32■■□□□ 1.48
MBD3-205ENST00000589064 SYNGAP1Q96PV0 1343 aa24.31■■□□□ 1.48
MBD3-205ENST00000589064 TRDNQ13061 729 aa24.31■■□□□ 1.48
MBD3-205ENST00000589064 LRRC26Q2I0M4 334 aa24.31■■□□□ 1.48
MBD3-205ENST00000589064 GPATCH4Q5T3I0 446 aaKnown RBP24.31■■□□□ 1.48
MBD3-205ENST00000589064 CHRDL2Q6WN34 429 aa24.31■■□□□ 1.48
MBD3-205ENST00000589064 FAM133AQ8N9E0 248 aa24.31■■□□□ 1.48
MBD3-205ENST00000589064 MAP4K1Q92918 833 aa24.31■■□□□ 1.48
MBD3-205ENST00000589064 CPVLQ9H3G5 476 aa24.31■■□□□ 1.48
MBD3-205ENST00000589064 TAF6LQ9Y6J9 622 aa24.31■■□□□ 1.48
MBD3-205ENST00000589064 RARBP10826 455 aa24.3■■□□□ 1.48
MBD3-205ENST00000589064 NSMFQ6X4W1 530 aa24.3■■□□□ 1.48
MBD3-205ENST00000589064 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.3■■□□□ 1.48
MBD3-205ENST00000589064 ZHX1Q9UKY1 873 aaPredicted RBP24.3■■□□□ 1.48
MBD3-205ENST00000589064 SOWAHBA6NEL2 793 aa24.29■■□□□ 1.48
MBD3-205ENST00000589064 LRRC41Q15345 812 aa24.29■■□□□ 1.48
MBD3-205ENST00000589064 XPNPEP3Q9NQH7 507 aa24.29■■□□□ 1.48
MBD3-205ENST00000589064 FAM184BQ9ULE4 1060 aa24.29■■□□□ 1.48
MBD3-205ENST00000589064 ZMYND8Q9ULU4 1186 aaPredicted RBP24.29■■□□□ 1.48
MBD3-205ENST00000589064 KBTBD13C9JR72 458 aa24.28■■□□□ 1.48
MBD3-205ENST00000589064 AKR1A1P14550 325 aa24.28■■□□□ 1.48
MBD3-205ENST00000589064 ATN1P54259 1190 aaPredicted RBP24.28■■□□□ 1.48
MBD3-205ENST00000589064 ACVR2BQ13705 512 aa24.28■■□□□ 1.48
MBD3-205ENST00000589064 IFIT1BQ5T764 474 aaKnown RBP24.28■■□□□ 1.48
MBD3-205ENST00000589064 KIAA1211Q6ZU35 1233 aa24.28■■□□□ 1.48
MBD3-205ENST00000589064 ARMCX2Q7L311 632 aa24.28■■□□□ 1.48
MBD3-205ENST00000589064 CCDC144CPQ8IYA2 1237 aa24.28■■□□□ 1.48
MBD3-205ENST00000589064 LENG1Q96BZ8 264 aaPredicted RBP24.28■■□□□ 1.48
MBD3-205ENST00000589064 CYP39A1Q9NYL5 469 aa24.28■■□□□ 1.48
MBD3-205ENST00000589064 E7EWF7 191 aa24.27■■□□□ 1.48
MBD3-205ENST00000589064 PGK1P00558 417 aa24.27■■□□□ 1.48
MBD3-205ENST00000589064 SEC23AQ15436 765 aa24.27■■□□□ 1.48
MBD3-205ENST00000589064 RBM8AQ9Y5S9 174 aaKnown RBP24.27■■□□□ 1.48
MBD3-205ENST00000589064 SYN1P17600 705 aa24.26■■□□□ 1.47
MBD3-205ENST00000589064 PURBQ96QR8 312 aaKnown RBP24.26■■□□□ 1.47
MBD3-205ENST00000589064 ESYT1Q9BSJ8 1104 aa24.26■■□□□ 1.47
MBD3-205ENST00000589064 ABHD16BQ9H3Z7 469 aa24.26■■□□□ 1.47
MBD3-205ENST00000589064 ZNFX1Q9P2E3 1918 aaKnown RBP24.26■■□□□ 1.47
MBD3-205ENST00000589064 NFIBO00712 420 aa24.26■■□□□ 1.47
MBD3-205ENST00000589064 ADCYAP1R1P41586 468 aa24.26■■□□□ 1.47
MBD3-205ENST00000589064 BAATQ14032 418 aaPredicted RBP24.26■■□□□ 1.47
MBD3-205ENST00000589064 BMP2KLQ5H9B9 411 aa24.26■■□□□ 1.47
MBD3-205ENST00000589064 STOX1Q6ZVD7 989 aa24.26■■□□□ 1.47
MBD3-205ENST00000589064 FERMT2Q96AC1 680 aa24.26■■□□□ 1.47
MBD3-205ENST00000589064 CCDC136Q96JN2 1154 aa24.26■■□□□ 1.47
MBD3-205ENST00000589064 DDX49Q9Y6V7 483 aaKnown RBP24.26■■□□□ 1.47
MBD3-205ENST00000589064 CEP290O15078 2479 aa24.25■■□□□ 1.47
MBD3-205ENST00000589064 ASB14A6NK59 587 aa24.25■■□□□ 1.47
MBD3-205ENST00000589064 IFIT3O14879 490 aaKnown RBP24.25■■□□□ 1.47
MBD3-205ENST00000589064 PARP1P09874 1014 aaKnown RBP24.25■■□□□ 1.47
MBD3-205ENST00000589064 ASPRV1Q53RT3 343 aa24.25■■□□□ 1.47
MBD3-205ENST00000589064 RALYLQ86SE5 291 aaKnown RBP24.25■■□□□ 1.47
MBD3-205ENST00000589064 ADGRF4Q8IZF3 695 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms