RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 DISC1Q9NRI5 854 aa17.28■□□□□ 0.36
MBD1-217ENST00000588937 PAXBP1Q9Y5B6 917 aa17.28■□□□□ 0.36
MBD1-217ENST00000588937 ADAMTSL1Q8N6G6 1762 aa17.27■□□□□ 0.36
MBD1-217ENST00000588937 SYNRGQ9UMZ2 1314 aa17.27■□□□□ 0.36
MBD1-217ENST00000588937 GREB1LQ9C091 1923 aaPredicted RBP17.27■□□□□ 0.36
MBD1-217ENST00000588937 GTF2F1P35269 517 aaKnown RBP eCLIP17.27■□□□□ 0.35
MBD1-217ENST00000588937 DACT2Q5SW24 774 aa17.27■□□□□ 0.35
MBD1-217ENST00000588937 RRAGBQ5VZM2 374 aa17.27■□□□□ 0.35
MBD1-217ENST00000588937 C16orf45Q96MC5 204 aaPredicted RBP17.27■□□□□ 0.35
MBD1-217ENST00000588937 UBA5Q9GZZ9 404 aa17.27■□□□□ 0.35
MBD1-217ENST00000588937 CUEDC2Q9H467 287 aa17.27■□□□□ 0.35
MBD1-217ENST00000588937 FRMPD2Q68DX3 1309 aaPredicted RBP17.27■□□□□ 0.35
MBD1-217ENST00000588937 KIF2AO00139 706 aaPredicted RBP17.26■□□□□ 0.35
MBD1-217ENST00000588937 CCP110O43303 1012 aa17.26■□□□□ 0.35
MBD1-217ENST00000588937 OR52Z1P0C646 297 aa17.26■□□□□ 0.35
MBD1-217ENST00000588937 CHRNA5P30532 468 aa17.26■□□□□ 0.35
MBD1-217ENST00000588937 TGFB2P61812 414 aa17.26■□□□□ 0.35
MBD1-217ENST00000588937 ZNF543Q08ER8 600 aa17.26■□□□□ 0.35
MBD1-217ENST00000588937 CUL4BQ13620 913 aa17.26■□□□□ 0.35
MBD1-217ENST00000588937 RASGRP2Q7LDG7 609 aa17.26■□□□□ 0.35
MBD1-217ENST00000588937 TRMT44Q8IYL2 757 aaKnown RBP17.26■□□□□ 0.35
MBD1-217ENST00000588937 RASSF8Q8NHQ8 419 aa17.26■□□□□ 0.35
MBD1-217ENST00000588937 CTAGE1Q96RT6 745 aa17.26■□□□□ 0.35
MBD1-217ENST00000588937 IDI2Q9BXS1 227 aa17.26■□□□□ 0.35
MBD1-217ENST00000588937 TMEM60Q9H2L4 133 aa17.26■□□□□ 0.35
MBD1-217ENST00000588937 SERPINA10Q9UK55 444 aa17.26■□□□□ 0.35
MBD1-217ENST00000588937 PSDA5PKW4 1024 aaPredicted RBP17.25■□□□□ 0.35
MBD1-217ENST00000588937 MPHOSPH10O00566 681 aaKnown RBP17.25■□□□□ 0.35
MBD1-217ENST00000588937 CCNT1O60563 726 aaKnown RBP17.25■□□□□ 0.35
MBD1-217ENST00000588937 KCNA3P22001 575 aa17.25■□□□□ 0.35
MBD1-217ENST00000588937 RBM5P52756 815 aaKnown RBP eCLIP17.25■□□□□ 0.35
MBD1-217ENST00000588937 LETM2Q2VYF4 491 aa17.25■□□□□ 0.35
MBD1-217ENST00000588937 KIAA0825Q8IV33 1275 aa17.25■□□□□ 0.35
MBD1-217ENST00000588937 CCAR2Q8N163 923 aaKnown RBP17.25■□□□□ 0.35
MBD1-217ENST00000588937 SGIP1Q9BQI5 828 aa17.25■□□□□ 0.35
MBD1-217ENST00000588937 TRIM34Q9BYJ4 488 aa17.25■□□□□ 0.35
MBD1-217ENST00000588937 PI4KBQ9UBF8 816 aa17.25■□□□□ 0.35
MBD1-217ENST00000588937 PNMA6FA0A0J9YX94 578 aa17.25■□□□□ 0.35
MBD1-217ENST00000588937 PPP1R3GB7ZBB8 358 aa17.25■□□□□ 0.35
MBD1-217ENST00000588937 POLD1P28340 1107 aa17.25■□□□□ 0.35
MBD1-217ENST00000588937 ADCY7P51828 1080 aa17.25■□□□□ 0.35
MBD1-217ENST00000588937 PTPN14Q15678 1187 aa17.25■□□□□ 0.35
MBD1-217ENST00000588937 ZNF658Q5TYW1 1059 aaPredicted RBP17.25■□□□□ 0.35
MBD1-217ENST00000588937 GPCPD1Q9NPB8 672 aa17.25■□□□□ 0.35
MBD1-217ENST00000588937 MYH4Q9Y623 1939 aa17.25■□□□□ 0.35
MBD1-217ENST00000588937 BRCA1P38398 1863 aaKnown RBP17.24■□□□□ 0.35
MBD1-217ENST00000588937 TUBB4AP04350 444 aa17.24■□□□□ 0.35
MBD1-217ENST00000588937 RPN1P04843 607 aaKnown RBP17.24■□□□□ 0.35
MBD1-217ENST00000588937 CASP1P29466 404 aa17.24■□□□□ 0.35
MBD1-217ENST00000588937 EIF6P56537 245 aaKnown RBP17.24■□□□□ 0.35
MBD1-217ENST00000588937 NFIAQ12857 509 aa17.24■□□□□ 0.35
MBD1-217ENST00000588937 KARSQ15046 597 aaKnown RBP17.24■□□□□ 0.35
MBD1-217ENST00000588937 KLHL10Q6JEL2 608 aa17.24■□□□□ 0.35
MBD1-217ENST00000588937 TBCKQ8TEA7 893 aa17.24■□□□□ 0.35
MBD1-217ENST00000588937 BLZF1Q9H2G9 400 aa17.24■□□□□ 0.35
MBD1-217ENST00000588937 CD44P16070 742 aaKnown RBP17.23■□□□□ 0.35
MBD1-217ENST00000588937 FILIP1LQ4L180 1135 aa17.23■□□□□ 0.35
MBD1-217ENST00000588937 CEP135Q66GS9 1140 aa17.23■□□□□ 0.35
MBD1-217ENST00000588937 SPECC1LQ69YQ0 1117 aa17.23■□□□□ 0.35
MBD1-217ENST00000588937 TTLL6Q8N841 843 aa17.23■□□□□ 0.35
MBD1-217ENST00000588937 STAMQ92783 540 aa17.23■□□□□ 0.35
MBD1-217ENST00000588937 MED15Q96RN5 788 aa17.23■□□□□ 0.35
MBD1-217ENST00000588937 KCNQ5Q9NR82 932 aa17.23■□□□□ 0.35
MBD1-217ENST00000588937 SAMSN1Q9NSI8 373 aaKnown RBP17.23■□□□□ 0.35
MBD1-217ENST00000588937 RWDD2AQ9UIY3 292 aa17.23■□□□□ 0.35
MBD1-217ENST00000588937 ZNF646O15015 1829 aaPredicted RBP17.23■□□□□ 0.35
MBD1-217ENST00000588937 A0A1B0GTH6 734 aa17.23■□□□□ 0.35
MBD1-217ENST00000588937 TMEM232C9JQI7 657 aa17.23■□□□□ 0.35
MBD1-217ENST00000588937 KCNB1Q14721 858 aa17.23■□□□□ 0.35
MBD1-217ENST00000588937 NR1I3Q14994 352 aa17.23■□□□□ 0.35
MBD1-217ENST00000588937 R3HDM1Q15032 1099 aaKnown RBP17.23■□□□□ 0.35
MBD1-217ENST00000588937 CCDC96Q2M329 555 aa17.23■□□□□ 0.35
MBD1-217ENST00000588937 JAKMIP3Q5VZ66 844 aa17.23■□□□□ 0.35
MBD1-217ENST00000588937 NYAP1Q6ZVC0 841 aa17.23■□□□□ 0.35
MBD1-217ENST00000588937 CABP7Q86V35 215 aa17.23■□□□□ 0.35
MBD1-217ENST00000588937 ADGRF4Q8IZF3 695 aa17.23■□□□□ 0.35
MBD1-217ENST00000588937 MKL1Q969V6 931 aa17.23■□□□□ 0.35
MBD1-217ENST00000588937 MTRQ99707 1265 aa17.23■□□□□ 0.35
MBD1-217ENST00000588937 GTPBP4Q9BZE4 634 aaKnown RBP17.23■□□□□ 0.35
MBD1-217ENST00000588937 GLT8D2Q9H1C3 349 aa17.23■□□□□ 0.35
MBD1-217ENST00000588937 KANSL2Q9H9L4 492 aa17.23■□□□□ 0.35
MBD1-217ENST00000588937 JMJD4Q9H9V9 463 aa17.23■□□□□ 0.35
MBD1-217ENST00000588937 INTS13Q9NVM9 706 aa17.23■□□□□ 0.35
MBD1-217ENST00000588937 BIN2Q9UBW5 565 aaPredicted RBP17.23■□□□□ 0.35
MBD1-217ENST00000588937 ZBTB7AO95365 584 aa17.22■□□□□ 0.35
MBD1-217ENST00000588937 ATP2B2Q01814 1243 aa17.22■□□□□ 0.35
MBD1-217ENST00000588937 SPAG1Q07617 926 aa17.22■□□□□ 0.35
MBD1-217ENST00000588937 TBX2Q13207 712 aaPredicted RBP17.22■□□□□ 0.35
MBD1-217ENST00000588937 CERKLQ49MI3 558 aaPredicted RBP17.22■□□□□ 0.35
MBD1-217ENST00000588937 CDKAL1Q5VV42 579 aa17.22■□□□□ 0.35
MBD1-217ENST00000588937 ZSCAN29Q8IWY8 852 aaPredicted RBP17.22■□□□□ 0.35
MBD1-217ENST00000588937 DCAF4Q8WV16 495 aa17.22■□□□□ 0.35
MBD1-217ENST00000588937 CCDC47Q96A33 483 aaKnown RBP17.22■□□□□ 0.35
MBD1-217ENST00000588937 TMX1Q9H3N1 280 aa17.22■□□□□ 0.35
MBD1-217ENST00000588937 RIC8AQ9NPQ8 531 aa17.22■□□□□ 0.35
MBD1-217ENST00000588937 NYAP2Q9P242 653 aa17.22■□□□□ 0.35
MBD1-217ENST00000588937 SCN9AQ15858 1988 aa17.21■□□□□ 0.35
MBD1-217ENST00000588937 CDC25AP30304 524 aa17.21■□□□□ 0.35
MBD1-217ENST00000588937 MRPL12P52815 198 aaKnown RBP17.21■□□□□ 0.35
MBD1-217ENST00000588937 PAK1Q13153 545 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms