RNA–Protein interactions for RNA: ENST00000588580.6

SUGP1-208, Transcript of SURP and G-patch domain containing 1, humanhuman

TSL 2

Gene SUGP1, Length 715 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUGP1-208ENST00000588580 USP17L22D6RA61 530 aa18.46■□□□□ 0.55
SUGP1-208ENST00000588580 USP17L17D6RBQ6 530 aa18.46■□□□□ 0.55
SUGP1-208ENST00000588580 USP17L19D6RCP7 530 aa18.46■□□□□ 0.55
SUGP1-208ENST00000588580 USP17L20D6RJB6 530 aa18.46■□□□□ 0.55
SUGP1-208ENST00000588580 HMGCRP04035 888 aa18.46■□□□□ 0.55
SUGP1-208ENST00000588580 BMP3P12645 472 aa18.46■□□□□ 0.55
SUGP1-208ENST00000588580 NEK4P51957 841 aa18.46■□□□□ 0.55
SUGP1-208ENST00000588580 APOBRQ0VD83 1088 aa18.46■□□□□ 0.55
SUGP1-208ENST00000588580 USP17L24Q0WX57 530 aa18.46■□□□□ 0.55
SUGP1-208ENST00000588580 RABEP1Q15276 862 aa18.46■□□□□ 0.55
SUGP1-208ENST00000588580 MYL10Q9BUA6 226 aa18.46■□□□□ 0.55
SUGP1-208ENST00000588580 ASCC2Q9H1I8 757 aaPredicted RBP18.46■□□□□ 0.55
SUGP1-208ENST00000588580 FBXO28Q9NVF7 368 aa18.46■□□□□ 0.55
SUGP1-208ENST00000588580 PFASO15067 1338 aa18.46■□□□□ 0.55
SUGP1-208ENST00000588580 RAD21O60216 631 aa18.45■□□□□ 0.54
SUGP1-208ENST00000588580 SLC1A4P43007 532 aa18.45■□□□□ 0.54
SUGP1-208ENST00000588580 AK2P54819 239 aa18.45■□□□□ 0.54
SUGP1-208ENST00000588580 MDM2Q00987 491 aaPredicted RBP18.45■□□□□ 0.54
SUGP1-208ENST00000588580 GRM4Q14833 912 aa18.45■□□□□ 0.54
SUGP1-208ENST00000588580 POTEEQ6S8J3 1075 aa18.45■□□□□ 0.54
SUGP1-208ENST00000588580 KCTD1Q719H9 257 aa18.45■□□□□ 0.54
SUGP1-208ENST00000588580 CATIPQ7Z7H3 387 aa18.45■□□□□ 0.54
SUGP1-208ENST00000588580 CHMP4CQ96CF2 233 aa18.45■□□□□ 0.54
SUGP1-208ENST00000588580 MAP3K14Q99558 947 aa18.45■□□□□ 0.54
SUGP1-208ENST00000588580 MAD2L2Q9UI95 211 aa18.45■□□□□ 0.54
SUGP1-208ENST00000588580 MTMR7Q9Y216 660 aa18.45■□□□□ 0.54
SUGP1-208ENST00000588580 SMCHD1A6NHR9 2005 aa18.44■□□□□ 0.54
SUGP1-208ENST00000588580 KLF18A0A0U1RQI7 1052 aa18.44■□□□□ 0.54
SUGP1-208ENST00000588580 CCDC69A6NI79 296 aa18.44■□□□□ 0.54
SUGP1-208ENST00000588580 PLA2G6O60733 806 aa18.44■□□□□ 0.54
SUGP1-208ENST00000588580 RCAN1P53805 252 aa18.44■□□□□ 0.54
SUGP1-208ENST00000588580 PABPC4Q13310 644 aaKnown RBP eCLIP18.44■□□□□ 0.54
SUGP1-208ENST00000588580 SLC35G1Q2M3R5 365 aa18.44■□□□□ 0.54
SUGP1-208ENST00000588580 BTNL9Q6UXG8 535 aa18.44■□□□□ 0.54
SUGP1-208ENST00000588580 NFXL1Q6ZNB6 911 aa18.44■□□□□ 0.54
SUGP1-208ENST00000588580 TANGO6Q9C0B7 1094 aa18.44■□□□□ 0.54
SUGP1-208ENST00000588580 FRMPD2Q68DX3 1309 aaPredicted RBP18.44■□□□□ 0.54
SUGP1-208ENST00000588580 PALM3A6NDB9 673 aaPredicted RBP18.43■□□□□ 0.54
SUGP1-208ENST00000588580 SPDYE16A6NNV3 312 aaPredicted RBP18.43■□□□□ 0.54
SUGP1-208ENST00000588580 FGD1P98174 961 aa18.43■□□□□ 0.54
SUGP1-208ENST00000588580 FAM110CQ1W6H9 321 aa18.43■□□□□ 0.54
SUGP1-208ENST00000588580 CCDC96Q2M329 555 aa18.43■□□□□ 0.54
SUGP1-208ENST00000588580 ASPRV1Q53RT3 343 aa18.43■□□□□ 0.54
SUGP1-208ENST00000588580 TTBK2Q6IQ55 1244 aa18.43■□□□□ 0.54
SUGP1-208ENST00000588580 LBX2Q6XYB7 198 aa18.43■□□□□ 0.54
SUGP1-208ENST00000588580 MICU3Q86XE3 530 aa18.43■□□□□ 0.54
SUGP1-208ENST00000588580 RAB11FIP4Q86YS3 637 aa18.43■□□□□ 0.54
SUGP1-208ENST00000588580 STAG2Q8N3U4 1231 aa18.43■□□□□ 0.54
SUGP1-208ENST00000588580 PPP1R9AQ9ULJ8 1098 aa18.43■□□□□ 0.54
SUGP1-208ENST00000588580 SLC12A7Q9Y666 1083 aa18.43■□□□□ 0.54
SUGP1-208ENST00000588580 LAMA2P24043 3122 aaKnown RBP18.42■□□□□ 0.54
SUGP1-208ENST00000588580 GOLGA8BA8MQT2 603 aa18.42■□□□□ 0.54
SUGP1-208ENST00000588580 FLOT1O75955 427 aa18.42■□□□□ 0.54
SUGP1-208ENST00000588580 PARP1P09874 1014 aaKnown RBP18.42■□□□□ 0.54
SUGP1-208ENST00000588580 GOLGA8HP0CJ92 632 aa18.42■□□□□ 0.54
SUGP1-208ENST00000588580 RXRAP19793 462 aa18.42■□□□□ 0.54
SUGP1-208ENST00000588580 DSG3P32926 999 aa18.42■□□□□ 0.54
SUGP1-208ENST00000588580 HERVK_113P62684 666 aa18.42■□□□□ 0.54
SUGP1-208ENST00000588580 IRX3P78415 501 aaPredicted RBP18.42■□□□□ 0.54
SUGP1-208ENST00000588580 GPATCH4Q5T3I0 446 aaKnown RBP18.42■□□□□ 0.54
SUGP1-208ENST00000588580 P2RX7Q99572 595 aaKnown RBP18.42■□□□□ 0.54
SUGP1-208ENST00000588580 SLF1Q9BQI6 1058 aa18.42■□□□□ 0.54
SUGP1-208ENST00000588580 FEM1BQ9UK73 627 aa18.42■□□□□ 0.54
SUGP1-208ENST00000588580 PNMA3Q9UL41 463 aa18.42■□□□□ 0.54
SUGP1-208ENST00000588580 ADAMTS5Q9UNA0 930 aa18.42■□□□□ 0.54
SUGP1-208ENST00000588580 EYSQ5T1H1 3165 aa18.42■□□□□ 0.54
SUGP1-208ENST00000588580 SPTBN5Q9NRC6 3674 aaKnown RBP18.42■□□□□ 0.54
SUGP1-208ENST00000588580 TMEM232C9JQI7 657 aa18.41■□□□□ 0.54
SUGP1-208ENST00000588580 ZBTB43O43298 467 aa18.41■□□□□ 0.54
SUGP1-208ENST00000588580 CD2BP2O95400 341 aaKnown RBP18.41■□□□□ 0.54
SUGP1-208ENST00000588580 COL6A1P12109 1028 aa18.41■□□□□ 0.54
SUGP1-208ENST00000588580 STAT2P52630 851 aa18.41■□□□□ 0.54
SUGP1-208ENST00000588580 LRRC26Q2I0M4 334 aa18.41■□□□□ 0.54
SUGP1-208ENST00000588580 REPS2Q8NFH8 660 aa18.41■□□□□ 0.54
SUGP1-208ENST00000588580 NUP133Q8WUM0 1156 aa18.41■□□□□ 0.54
SUGP1-208ENST00000588580 TRIB2Q92519 343 aa18.41■□□□□ 0.54
SUGP1-208ENST00000588580 ATG4CQ96DT6 458 aa18.41■□□□□ 0.54
SUGP1-208ENST00000588580 LARP6Q9BRS8 491 aaKnown RBP18.41■□□□□ 0.54
SUGP1-208ENST00000588580 CPVLQ9H3G5 476 aa18.41■□□□□ 0.54
SUGP1-208ENST00000588580 GPCPD1Q9NPB8 672 aa18.41■□□□□ 0.54
SUGP1-208ENST00000588580 FAM217BQ9NTX9 383 aaPredicted RBP18.41■□□□□ 0.54
SUGP1-208ENST00000588580 TPCN1Q9ULQ1 816 aa18.41■□□□□ 0.54
SUGP1-208ENST00000588580 CNMDO75829 334 aa18.4■□□□□ 0.54
SUGP1-208ENST00000588580 LARGE1O95461 756 aa18.4■□□□□ 0.54
SUGP1-208ENST00000588580 CALM1P0DP23 149 aa18.4■□□□□ 0.54
SUGP1-208ENST00000588580 CALM2P0DP24 149 aa18.4■□□□□ 0.54
SUGP1-208ENST00000588580 CALM3P0DP25 149 aa18.4■□□□□ 0.54
SUGP1-208ENST00000588580 PDIA3P30101 505 aaKnown RBP18.4■□□□□ 0.54
SUGP1-208ENST00000588580 COG2Q14746 738 aa18.4■□□□□ 0.54
SUGP1-208ENST00000588580 ANKRD1Q15327 319 aa18.4■□□□□ 0.54
SUGP1-208ENST00000588580 FAM160B2Q86V87 743 aa18.4■□□□□ 0.54
SUGP1-208ENST00000588580 FANCBQ8NB91 859 aa18.4■□□□□ 0.54
SUGP1-208ENST00000588580 ZNF274Q96GC6 653 aaPredicted RBP18.4■□□□□ 0.54
SUGP1-208ENST00000588580 CDX2Q99626 313 aaPredicted RBP18.4■□□□□ 0.54
SUGP1-208ENST00000588580 PRUNE2Q8WUY3 3088 aa18.39■□□□□ 0.54
SUGP1-208ENST00000588580 GOLGA8AA7E2F4 631 aa18.39■□□□□ 0.53
SUGP1-208ENST00000588580 PLEKHA8P1O95397 391 aa18.39■□□□□ 0.53
SUGP1-208ENST00000588580 CDC27P30260 824 aa18.39■□□□□ 0.53
SUGP1-208ENST00000588580 SLC16A2P36021 539 aa18.39■□□□□ 0.53
SUGP1-208ENST00000588580 MAP3K21Q5TCX8 1036 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms