RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 RAVER2Q9HCJ3 691 aaKnown RBP18.33■□□□□ 0.52
IFT20-216ENST00000588477 ZBED4O75132 1171 aa18.32■□□□□ 0.52
IFT20-216ENST00000588477 UBE3CQ15386 1083 aa18.32■□□□□ 0.52
IFT20-216ENST00000588477 RAB30Q15771 203 aa18.32■□□□□ 0.52
IFT20-216ENST00000588477 ARMCX2Q7L311 632 aa18.32■□□□□ 0.52
IFT20-216ENST00000588477 PANK1Q8TE04 598 aa18.32■□□□□ 0.52
IFT20-216ENST00000588477 NKX2-4Q9H2Z4 354 aa18.32■□□□□ 0.52
IFT20-216ENST00000588477 IL23AQ9NPF7 189 aa18.32■□□□□ 0.52
IFT20-216ENST00000588477 CXXC1Q9P0U4 656 aaPredicted RBP18.32■□□□□ 0.52
IFT20-216ENST00000588477 NYAP2Q9P242 653 aa18.32■□□□□ 0.52
IFT20-216ENST00000588477 ATP2A1O14983 1001 aa18.31■□□□□ 0.52
IFT20-216ENST00000588477 NDUFB10O96000 172 aa18.31■□□□□ 0.52
IFT20-216ENST00000588477 CD4P01730 458 aa18.31■□□□□ 0.52
IFT20-216ENST00000588477 FGBP02675 491 aa18.31■□□□□ 0.52
IFT20-216ENST00000588477 ATP5JP18859 108 aa18.31■□□□□ 0.52
IFT20-216ENST00000588477 RASA1P20936 1047 aa18.31■□□□□ 0.52
IFT20-216ENST00000588477 BEX3Q00994 111 aa18.31■□□□□ 0.52
IFT20-216ENST00000588477 CCDC144CPQ8IYA2 1237 aa18.31■□□□□ 0.52
IFT20-216ENST00000588477 IL27Q8NEV9 243 aa18.31■□□□□ 0.52
IFT20-216ENST00000588477 HERVK_113Q902F9 699 aa18.31■□□□□ 0.52
IFT20-216ENST00000588477 KIFC2Q96AC6 838 aa18.31■□□□□ 0.52
IFT20-216ENST00000588477 FGD4Q96M96 766 aa18.31■□□□□ 0.52
IFT20-216ENST00000588477 UHRF1Q96T88 793 aaPredicted RBP18.31■□□□□ 0.52
IFT20-216ENST00000588477 PUS7LQ9H0K6 701 aaKnown RBP18.31■□□□□ 0.52
IFT20-216ENST00000588477 SLC28A3Q9HAS3 691 aa18.31■□□□□ 0.52
IFT20-216ENST00000588477 ARPP21Q9UBL0 812 aaPredicted RBP18.31■□□□□ 0.52
IFT20-216ENST00000588477 NCOR1O75376 2440 aa18.31■□□□□ 0.52
IFT20-216ENST00000588477 SCN5AQ14524 2016 aa18.3■□□□□ 0.52
IFT20-216ENST00000588477 LRRC37A2A6NM11 1700 aa18.3■□□□□ 0.52
IFT20-216ENST00000588477 CTAGE5O15320 804 aa18.3■□□□□ 0.52
IFT20-216ENST00000588477 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.3■□□□□ 0.52
IFT20-216ENST00000588477 HAUS7Q99871 368 aa18.3■□□□□ 0.52
IFT20-216ENST00000588477 MKNK2Q9HBH9 465 aa18.3■□□□□ 0.52
IFT20-216ENST00000588477 CLIP2Q9UDT6 1046 aa18.3■□□□□ 0.52
IFT20-216ENST00000588477 YBX2Q9Y2T7 364 aaKnown RBP18.3■□□□□ 0.52
IFT20-216ENST00000588477 UMODL1Q5DID0 1318 aa18.29■□□□□ 0.52
IFT20-216ENST00000588477 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.29■□□□□ 0.52
IFT20-216ENST00000588477 OTOP2Q7RTS6 562 aa18.29■□□□□ 0.52
IFT20-216ENST00000588477 RPAP2Q8IXW5 612 aaPredicted RBP18.29■□□□□ 0.52
IFT20-216ENST00000588477 CHST13Q8NET6 341 aa18.29■□□□□ 0.52
IFT20-216ENST00000588477 KATNBL1Q9H079 304 aa18.29■□□□□ 0.52
IFT20-216ENST00000588477 MTIF3Q9H2K0 278 aaKnown RBP18.29■□□□□ 0.52
IFT20-216ENST00000588477 HIPK3Q9H422 1215 aa18.29■□□□□ 0.52
IFT20-216ENST00000588477 SLC38A10Q9HBR0 1119 aa18.29■□□□□ 0.52
IFT20-216ENST00000588477 FBXO40Q9UH90 709 aa18.29■□□□□ 0.52
IFT20-216ENST00000588477 MINDY4BA8MYZ0 360 aa18.28■□□□□ 0.52
IFT20-216ENST00000588477 RAB11FIP3O75154 756 aa18.28■□□□□ 0.52
IFT20-216ENST00000588477 CCL23P55773 120 aa18.28■□□□□ 0.52
IFT20-216ENST00000588477 CNTN2Q02246 1040 aa18.28■□□□□ 0.52
IFT20-216ENST00000588477 TNFAIP2Q03169 654 aa18.28■□□□□ 0.52
IFT20-216ENST00000588477 ZSCAN25Q6NSZ9 544 aa18.28■□□□□ 0.52
IFT20-216ENST00000588477 CXCL17Q6UXB2 119 aa18.28■□□□□ 0.52
IFT20-216ENST00000588477 NOL8Q76FK4 1167 aaKnown RBP18.28■□□□□ 0.52
IFT20-216ENST00000588477 HOMER2Q9NSB8 354 aa18.28■□□□□ 0.52
IFT20-216ENST00000588477 XIRP2A4UGR9 3374 aa18.28■□□□□ 0.52
IFT20-216ENST00000588477 LCTP09848 1927 aa18.27■□□□□ 0.52
IFT20-216ENST00000588477 HMMRO75330 724 aa18.27■□□□□ 0.52
IFT20-216ENST00000588477 RABGGTBP53611 331 aa18.27■□□□□ 0.52
IFT20-216ENST00000588477 NKX3-2P78367 333 aa18.27■□□□□ 0.52
IFT20-216ENST00000588477 SBK1Q52WX2 424 aa18.27■□□□□ 0.52
IFT20-216ENST00000588477 SIRT2Q8IXJ6 389 aa18.27■□□□□ 0.52
IFT20-216ENST00000588477 SLC43A3Q8NBI5 491 aa18.27■□□□□ 0.52
IFT20-216ENST00000588477 TSPYL2Q9H2G4 693 aaPredicted RBP18.27■□□□□ 0.52
IFT20-216ENST00000588477 FEM1BQ9UK73 627 aa18.27■□□□□ 0.52
IFT20-216ENST00000588477 TRANK1O15050 2925 aa18.27■□□□□ 0.52
IFT20-216ENST00000588477 ASTN1O14525 1302 aa18.26■□□□□ 0.51
IFT20-216ENST00000588477 ITGA7Q13683 1181 aa18.26■□□□□ 0.51
IFT20-216ENST00000588477 MICALL1Q8N3F8 863 aa18.26■□□□□ 0.51
IFT20-216ENST00000588477 STRBPQ96SI9 672 aaKnown RBP18.26■□□□□ 0.51
IFT20-216ENST00000588477 BDP1A6H8Y1 2624 aa18.25■□□□□ 0.51
IFT20-216ENST00000588477 IGKV6D-41A0A0C4DH26 115 aa18.25■□□□□ 0.51
IFT20-216ENST00000588477 GSG1L2A8MUP6 293 aa18.25■□□□□ 0.51
IFT20-216ENST00000588477 MYOGP15173 224 aa18.25■□□□□ 0.51
IFT20-216ENST00000588477 OAZ1P54368 228 aa18.25■□□□□ 0.51
IFT20-216ENST00000588477 PPP2R2DQ66LE6 453 aa18.25■□□□□ 0.51
IFT20-216ENST00000588477 TLK2Q86UE8 772 aa18.25■□□□□ 0.51
IFT20-216ENST00000588477 ZNF444Q8N0Y2 327 aaPredicted RBP18.25■□□□□ 0.51
IFT20-216ENST00000588477 MKL1Q969V6 931 aa18.25■□□□□ 0.51
IFT20-216ENST00000588477 NECAB3Q96P71 396 aaPredicted RBP18.25■□□□□ 0.51
IFT20-216ENST00000588477 GNEQ9Y223 722 aaKnown RBP18.25■□□□□ 0.51
IFT20-216ENST00000588477 GRIN2DO15399 1336 aa18.24■□□□□ 0.51
IFT20-216ENST00000588477 CABYRO75952 493 aa18.24■□□□□ 0.51
IFT20-216ENST00000588477 PTGS1P23219 599 aa18.24■□□□□ 0.51
IFT20-216ENST00000588477 PLA2G5P39877 138 aa18.24■□□□□ 0.51
IFT20-216ENST00000588477 RPUSD2Q8IZ73 545 aaKnown RBP18.24■□□□□ 0.51
IFT20-216ENST00000588477 LRRC47Q8N1G4 583 aaKnown RBP18.24■□□□□ 0.51
IFT20-216ENST00000588477 FAM133AQ8N9E0 248 aa18.24■□□□□ 0.51
IFT20-216ENST00000588477 FAM122AQ96E09 287 aa18.24■□□□□ 0.51
IFT20-216ENST00000588477 CEP95Q96GE4 821 aa18.24■□□□□ 0.51
IFT20-216ENST00000588477 NOC4LQ9BVI4 516 aaKnown RBP18.24■□□□□ 0.51
IFT20-216ENST00000588477 AP5M1Q9H0R1 490 aa18.24■□□□□ 0.51
IFT20-216ENST00000588477 TRPV6Q9H1D0 765 aa18.24■□□□□ 0.51
IFT20-216ENST00000588477 WNT8AQ9H1J5 351 aa18.24■□□□□ 0.51
IFT20-216ENST00000588477 ACAD9Q9H845 621 aa18.24■□□□□ 0.51
IFT20-216ENST00000588477 SLC4A7Q9Y6M7 1214 aa18.24■□□□□ 0.51
IFT20-216ENST00000588477 TRIP12Q14669 1992 aaPredicted RBP18.24■□□□□ 0.51
IFT20-216ENST00000588477 PRRC2BQ5JSZ5 2229 aaKnown RBP18.23■□□□□ 0.51
IFT20-216ENST00000588477 SOWAHBA6NEL2 793 aa18.23■□□□□ 0.51
IFT20-216ENST00000588477 ZBBXA8MT70 800 aa18.23■□□□□ 0.51
IFT20-216ENST00000588477 DYNC1LI2O43237 492 aaPredicted RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms