RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 TMTC3Q6ZXV5 915 aa10.52□□□□□ -0.73
CIRBP-218ENST00000588344 TEX2Q8IWB9 1127 aa10.52□□□□□ -0.73
CIRBP-218ENST00000588344 ABRAQ8N0Z2 381 aa10.52□□□□□ -0.73
CIRBP-218ENST00000588344 STAG2Q8N3U4 1231 aa10.52□□□□□ -0.73
CIRBP-218ENST00000588344 REPS2Q8NFH8 660 aa10.52□□□□□ -0.73
CIRBP-218ENST00000588344 COA7Q96BR5 231 aa10.52□□□□□ -0.73
CIRBP-218ENST00000588344 MTMR8Q96EF0 704 aa10.52□□□□□ -0.73
CIRBP-218ENST00000588344 RRP36Q96EU6 259 aaKnown RBP10.52□□□□□ -0.73
CIRBP-218ENST00000588344 MYL10Q9BUA6 226 aa10.52□□□□□ -0.73
CIRBP-218ENST00000588344 SLKQ9H2G2 1235 aaPredicted RBP10.52□□□□□ -0.73
CIRBP-218ENST00000588344 VAT1LQ9HCJ6 419 aa10.52□□□□□ -0.73
CIRBP-218ENST00000588344 TXNRD2Q9NNW7 524 aa10.52□□□□□ -0.73
CIRBP-218ENST00000588344 SH2B1Q9NRF2 756 aaPredicted RBP10.52□□□□□ -0.73
CIRBP-218ENST00000588344 SEC63Q9UGP8 760 aaKnown RBP10.52□□□□□ -0.73
CIRBP-218ENST00000588344 NID2Q14112 1375 aa10.52□□□□□ -0.73
CIRBP-218ENST00000588344 ATAD5Q96QE3 1844 aa10.51□□□□□ -0.73
CIRBP-218ENST00000588344 TNPO2O14787 897 aaKnown RBP10.51□□□□□ -0.73
CIRBP-218ENST00000588344 CPLX1O14810 134 aa10.51□□□□□ -0.73
CIRBP-218ENST00000588344 AKAP17AQ02040 695 aaKnown RBP10.51□□□□□ -0.73
CIRBP-218ENST00000588344 SNRNP48Q6IEG0 339 aaKnown RBP10.51□□□□□ -0.73
CIRBP-218ENST00000588344 POTEEQ6S8J3 1075 aa10.51□□□□□ -0.73
CIRBP-218ENST00000588344 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.51□□□□□ -0.73
CIRBP-218ENST00000588344 PLEKHH3Q7Z736 793 aa10.51□□□□□ -0.73
CIRBP-218ENST00000588344 NCAPG2Q86XI2 1143 aa10.51□□□□□ -0.73
CIRBP-218ENST00000588344 FBXO11Q86XK2 927 aa10.51□□□□□ -0.73
CIRBP-218ENST00000588344 CPXCR1Q8N123 301 aa10.51□□□□□ -0.73
CIRBP-218ENST00000588344 SRBD1Q8N5C6 995 aaKnown RBP10.51□□□□□ -0.73
CIRBP-218ENST00000588344 SAMD3Q8N6K7 520 aa10.51□□□□□ -0.73
CIRBP-218ENST00000588344 RGS22Q8NE09 1264 aa10.51□□□□□ -0.73
CIRBP-218ENST00000588344 SOCS4Q8WXH5 440 aa10.51□□□□□ -0.73
CIRBP-218ENST00000588344 AMNQ9BXJ7 453 aa10.51□□□□□ -0.73
CIRBP-218ENST00000588344 MOV10L1Q9BXT6 1211 aaKnown RBP10.51□□□□□ -0.73
CIRBP-218ENST00000588344 JMJD4Q9H9V9 463 aa10.51□□□□□ -0.73
CIRBP-218ENST00000588344 EFCC1Q9HA90 598 aa10.51□□□□□ -0.73
CIRBP-218ENST00000588344 RAVER2Q9HCJ3 691 aaKnown RBP10.51□□□□□ -0.73
CIRBP-218ENST00000588344 SLC5A4Q9NY91 659 aa10.51□□□□□ -0.73
CIRBP-218ENST00000588344 CCPG1Q9ULG6 757 aa10.51□□□□□ -0.73
CIRBP-218ENST00000588344 HPS5Q9UPZ3 1129 aa10.51□□□□□ -0.73
CIRBP-218ENST00000588344 IVNS1ABPQ9Y6Y0 642 aa10.51□□□□□ -0.73
CIRBP-218ENST00000588344 LOC285556D6RIA3 1793 aa10.5□□□□□ -0.73
CIRBP-218ENST00000588344 SLC15A5A6NIM6 579 aa10.5□□□□□ -0.73
CIRBP-218ENST00000588344 PFKFB2O60825 505 aa10.5□□□□□ -0.73
CIRBP-218ENST00000588344 FCER1AP12319 257 aa10.5□□□□□ -0.73
CIRBP-218ENST00000588344 IFNAR1P17181 557 aa10.5□□□□□ -0.73
CIRBP-218ENST00000588344 ERCC3P19447 782 aa10.5□□□□□ -0.73
CIRBP-218ENST00000588344 ADD1P35611 737 aaKnown RBP10.5□□□□□ -0.73
CIRBP-218ENST00000588344 CDC37Q16543 378 aaPredicted RBP10.5□□□□□ -0.73
CIRBP-218ENST00000588344 CCDC174Q6PII3 467 aa10.5□□□□□ -0.73
CIRBP-218ENST00000588344 MCF2L2Q86YR7 1114 aa10.5□□□□□ -0.73
CIRBP-218ENST00000588344 CCDC144CPQ8IYA2 1237 aa10.5□□□□□ -0.73
CIRBP-218ENST00000588344 TRIM22Q8IYM9 498 aa10.5□□□□□ -0.73
CIRBP-218ENST00000588344 FAM217BQ9NTX9 383 aaPredicted RBP10.5□□□□□ -0.73
CIRBP-218ENST00000588344 MAP3K20Q9NYL2 800 aaKnown RBP10.5□□□□□ -0.73
CIRBP-218ENST00000588344 TSKSQ9UJT2 592 aa10.5□□□□□ -0.73
CIRBP-218ENST00000588344 TPCN1Q9ULQ1 816 aa10.5□□□□□ -0.73
CIRBP-218ENST00000588344 MRPL11Q9Y3B7 192 aaKnown RBP10.5□□□□□ -0.73
CIRBP-218ENST00000588344 ABCB11O95342 1321 aa10.5□□□□□ -0.73
CIRBP-218ENST00000588344 MYH8P13535 1937 aa10.5□□□□□ -0.73
CIRBP-218ENST00000588344 hCG_1984214I3L0E3 225 aa10.49□□□□□ -0.73
CIRBP-218ENST00000588344 CYTH3O43739 400 aa10.49□□□□□ -0.73
CIRBP-218ENST00000588344 XRCC5P13010 732 aaKnown RBP10.49□□□□□ -0.73
CIRBP-218ENST00000588344 ALAS1P13196 640 aa10.49□□□□□ -0.73
CIRBP-218ENST00000588344 RXRAP19793 462 aa10.49□□□□□ -0.73
CIRBP-218ENST00000588344 PTPREP23469 700 aa10.49□□□□□ -0.73
CIRBP-218ENST00000588344 CDC27P30260 824 aa10.49□□□□□ -0.73
CIRBP-218ENST00000588344 CCT2P78371 535 aaKnown RBP10.49□□□□□ -0.73
CIRBP-218ENST00000588344 KCTD2Q14681 263 aa10.49□□□□□ -0.73
CIRBP-218ENST00000588344 QRICH1Q2TAL8 776 aa10.49□□□□□ -0.73
CIRBP-218ENST00000588344 RASGRP2Q7LDG7 609 aa10.49□□□□□ -0.73
CIRBP-218ENST00000588344 GPR142Q7Z601 462 aa10.49□□□□□ -0.73
CIRBP-218ENST00000588344 CTU1Q7Z7A3 348 aaKnown RBP10.49□□□□□ -0.73
CIRBP-218ENST00000588344 TRMT44Q8IYL2 757 aaKnown RBP10.49□□□□□ -0.73
CIRBP-218ENST00000588344 FAM177A1Q8N128 213 aaPredicted RBP10.49□□□□□ -0.73
CIRBP-218ENST00000588344 ZNF713Q8N859 430 aaPredicted RBP10.49□□□□□ -0.73
CIRBP-218ENST00000588344 CD99L2Q8TCZ2 262 aa10.49□□□□□ -0.73
CIRBP-218ENST00000588344 TRIM47Q96LD4 638 aa10.49□□□□□ -0.73
CIRBP-218ENST00000588344 AGBL1Q96MI9 1066 aa10.49□□□□□ -0.73
CIRBP-218ENST00000588344 TRERF1Q96PN7 1200 aa10.49□□□□□ -0.73
CIRBP-218ENST00000588344 NUDT12Q9BQG2 462 aa10.49□□□□□ -0.73
CIRBP-218ENST00000588344 RNF26Q9BY78 433 aaPredicted RBP10.49□□□□□ -0.73
CIRBP-218ENST00000588344 PORCNQ9H237 461 aa10.49□□□□□ -0.73
CIRBP-218ENST00000588344 ACAD9Q9H845 621 aa10.49□□□□□ -0.73
CIRBP-218ENST00000588344 V9GY48 417 aaPredicted RBP10.49□□□□□ -0.73
CIRBP-218ENST00000588344 ZNF536O15090 1300 aa10.49□□□□□ -0.73
CIRBP-218ENST00000588344 PRPF3O43395 683 aaKnown RBP10.48□□□□□ -0.73
CIRBP-218ENST00000588344 PLEKHA8P1O95397 391 aa10.48□□□□□ -0.73
CIRBP-218ENST00000588344 SSRP1Q08945 709 aaKnown RBP10.48□□□□□ -0.73
CIRBP-218ENST00000588344 FUT2Q10981 343 aa10.48□□□□□ -0.73
CIRBP-218ENST00000588344 IRF5Q13568 498 aa10.48□□□□□ -0.73
CIRBP-218ENST00000588344 GRB14Q14449 540 aa10.48□□□□□ -0.73
CIRBP-218ENST00000588344 WDR78Q5VTH9 848 aa10.48□□□□□ -0.73
CIRBP-218ENST00000588344 NBPF11Q86T75 865 aa10.48□□□□□ -0.73
CIRBP-218ENST00000588344 HOMER1Q86YM7 354 aa10.48□□□□□ -0.73
CIRBP-218ENST00000588344 ANKRD35Q8N283 1001 aa10.48□□□□□ -0.73
CIRBP-218ENST00000588344 CCDC82Q8N4S0 544 aa10.48□□□□□ -0.73
CIRBP-218ENST00000588344 CCDC12Q8WUD4 166 aaPredicted RBP10.48□□□□□ -0.73
CIRBP-218ENST00000588344 WASF1Q92558 559 aa10.48□□□□□ -0.73
CIRBP-218ENST00000588344 DDX11Q96FC9 970 aa10.48□□□□□ -0.73
CIRBP-218ENST00000588344 PIGSQ96S52 555 aa10.48□□□□□ -0.73
CIRBP-218ENST00000588344 MMP19Q99542 508 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms