RNA–Protein interactions for RNA: ENST00000588275.2

LINC01842-201, Transcript of long intergenic non-protein coding RNA 1842, humanhuman

TSL 1 (best) BASIC

Gene LINC01842, Length 768 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01842-201ENST00000588275 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.97■□□□□ 0.79
LINC01842-201ENST00000588275 VTI1AQ96AJ9 217 aa19.97■□□□□ 0.79
LINC01842-201ENST00000588275 CDX2Q99626 313 aaPredicted RBP19.97■□□□□ 0.79
LINC01842-201ENST00000588275 SPC25Q9HBM1 224 aa19.97■□□□□ 0.79
LINC01842-201ENST00000588275 UNC80Q8N2C7 3258 aa19.96■□□□□ 0.79
LINC01842-201ENST00000588275 OAZ1P54368 228 aa19.96■□□□□ 0.79
LINC01842-201ENST00000588275 SMAD3P84022 425 aaKnown RBP19.96■□□□□ 0.79
LINC01842-201ENST00000588275 FAAP100Q0VG06 881 aa19.96■□□□□ 0.79
LINC01842-201ENST00000588275 CCDC144BQ3MJ40 725 aa19.96■□□□□ 0.79
LINC01842-201ENST00000588275 ZMYM1Q5SVZ6 1142 aa19.96■□□□□ 0.79
LINC01842-201ENST00000588275 CCDC129Q6ZRS4 1044 aa19.96■□□□□ 0.79
LINC01842-201ENST00000588275 KLHDC9Q8NEP7 349 aa19.96■□□□□ 0.79
LINC01842-201ENST00000588275 FGD4Q96M96 766 aa19.96■□□□□ 0.79
LINC01842-201ENST00000588275 GLT1D1Q96MS3 346 aa19.96■□□□□ 0.79
LINC01842-201ENST00000588275 SEMA6BQ9H3T3 888 aa19.96■□□□□ 0.79
LINC01842-201ENST00000588275 ABHD16BQ9H3Z7 469 aa19.96■□□□□ 0.79
LINC01842-201ENST00000588275 ACAD9Q9H845 621 aa19.96■□□□□ 0.79
LINC01842-201ENST00000588275 SYNPO2Q9UMS6 1093 aa19.96■□□□□ 0.79
LINC01842-201ENST00000588275 STX8Q9UNK0 236 aa19.96■□□□□ 0.79
LINC01842-201ENST00000588275 MTMR7Q9Y216 660 aa19.96■□□□□ 0.79
LINC01842-201ENST00000588275 PCDHB15Q9Y5E8 787 aa19.96■□□□□ 0.79
LINC01842-201ENST00000588275 ADCY6O43306 1168 aa19.95■□□□□ 0.78
LINC01842-201ENST00000588275 MX1P20591 662 aa19.95■□□□□ 0.78
LINC01842-201ENST00000588275 SLC1A4P43007 532 aa19.95■□□□□ 0.78
LINC01842-201ENST00000588275 CTDSPL2Q05D32 466 aa19.95■□□□□ 0.78
LINC01842-201ENST00000588275 CCDC144CPQ8IYA2 1237 aa19.95■□□□□ 0.78
LINC01842-201ENST00000588275 RNF146Q9NTX7 359 aa19.95■□□□□ 0.78
LINC01842-201ENST00000588275 ZBTB47Q9UFB7 747 aaPredicted RBP19.95■□□□□ 0.78
LINC01842-201ENST00000588275 TSPY2A6NKD2 308 aa19.94■□□□□ 0.78
LINC01842-201ENST00000588275 ASGR1P07306 291 aa19.94■□□□□ 0.78
LINC01842-201ENST00000588275 MCCP23508 829 aa19.94■□□□□ 0.78
LINC01842-201ENST00000588275 CNTN2Q02246 1040 aa19.94■□□□□ 0.78
LINC01842-201ENST00000588275 CCDC174Q6PII3 467 aa19.94■□□□□ 0.78
LINC01842-201ENST00000588275 KCTD1Q719H9 257 aa19.94■□□□□ 0.78
LINC01842-201ENST00000588275 NOL8Q76FK4 1167 aaKnown RBP19.94■□□□□ 0.78
LINC01842-201ENST00000588275 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.94■□□□□ 0.78
LINC01842-201ENST00000588275 ANKRD33Q7Z3H0 272 aa19.94■□□□□ 0.78
LINC01842-201ENST00000588275 FAM160B2Q86V87 743 aa19.94■□□□□ 0.78
LINC01842-201ENST00000588275 PCSK9Q8NBP7 692 aaKnown RBP19.94■□□□□ 0.78
LINC01842-201ENST00000588275 CHURC1Q8WUH1 139 aa19.94■□□□□ 0.78
LINC01842-201ENST00000588275 MYLIPQ8WY64 445 aa19.94■□□□□ 0.78
LINC01842-201ENST00000588275 AGBL1Q96MI9 1066 aa19.94■□□□□ 0.78
LINC01842-201ENST00000588275 TOX2Q96NM4 488 aa19.94■□□□□ 0.78
LINC01842-201ENST00000588275 TTYH1Q9H313 450 aaPredicted RBP19.94■□□□□ 0.78
LINC01842-201ENST00000588275 FDX1P10109 184 aa19.93■□□□□ 0.78
LINC01842-201ENST00000588275 ALAS1P13196 640 aa19.93■□□□□ 0.78
LINC01842-201ENST00000588275 SNAP25P60880 206 aa19.93■□□□□ 0.78
LINC01842-201ENST00000588275 GNASQ5JWF2 1037 aa19.93■□□□□ 0.78
LINC01842-201ENST00000588275 CCSAPQ6IQ19 270 aaPredicted RBP19.93■□□□□ 0.78
LINC01842-201ENST00000588275 RASGRP2Q7LDG7 609 aa19.93■□□□□ 0.78
LINC01842-201ENST00000588275 MAFAQ8NHW3 353 aaPredicted RBP19.93■□□□□ 0.78
LINC01842-201ENST00000588275 STAG1Q8WVM7 1258 aa19.93■□□□□ 0.78
LINC01842-201ENST00000588275 MROH7Q68CQ1 1323 aa19.93■□□□□ 0.78
LINC01842-201ENST00000588275 NMT2O60551 498 aa19.92■□□□□ 0.78
LINC01842-201ENST00000588275 CST5P28325 142 aaPredicted RBP19.92■□□□□ 0.78
LINC01842-201ENST00000588275 GJA9P57773 515 aa19.92■□□□□ 0.78
LINC01842-201ENST00000588275 GMCL1Q96IK5 515 aa19.92■□□□□ 0.78
LINC01842-201ENST00000588275 TRERF1Q96PN7 1200 aa19.92■□□□□ 0.78
LINC01842-201ENST00000588275 A1CFQ9NQ94 594 aaKnown RBP19.92■□□□□ 0.78
LINC01842-201ENST00000588275 INCENPQ9NQS7 918 aa19.92■□□□□ 0.78
LINC01842-201ENST00000588275 ELP1O95163 1332 aa19.92■□□□□ 0.78
LINC01842-201ENST00000588275 A0A0U1RQG5 324 aaPredicted RBP19.91■□□□□ 0.78
LINC01842-201ENST00000588275 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.91■□□□□ 0.78
LINC01842-201ENST00000588275 RANBP6O60518 1105 aaKnown RBP19.91■□□□□ 0.78
LINC01842-201ENST00000588275 TIMP1P01033 207 aa19.91■□□□□ 0.78
LINC01842-201ENST00000588275 FOSL2P15408 326 aa19.91■□□□□ 0.78
LINC01842-201ENST00000588275 BEX3Q00994 111 aa19.91■□□□□ 0.78
LINC01842-201ENST00000588275 CCDC96Q2M329 555 aa19.91■□□□□ 0.78
LINC01842-201ENST00000588275 PPP4R3BQ5MIZ7 849 aa19.91■□□□□ 0.78
LINC01842-201ENST00000588275 FAM133AQ8N9E0 248 aa19.91■□□□□ 0.78
LINC01842-201ENST00000588275 COL25A1Q9BXS0 654 aaPredicted RBP19.91■□□□□ 0.78
LINC01842-201ENST00000588275 UPF3AQ9H1J1 476 aaKnown RBP19.91■□□□□ 0.78
LINC01842-201ENST00000588275 TOMM22Q9NS69 142 aa19.91■□□□□ 0.78
LINC01842-201ENST00000588275 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.91■□□□□ 0.78
LINC01842-201ENST00000588275 ZNF536O15090 1300 aa19.91■□□□□ 0.78
LINC01842-201ENST00000588275 TNFAIP2Q03169 654 aa19.9■□□□□ 0.78
LINC01842-201ENST00000588275 PPP1R12CQ9BZL4 782 aa19.9■□□□□ 0.78
LINC01842-201ENST00000588275 KATNBL1Q9H079 304 aa19.9■□□□□ 0.78
LINC01842-201ENST00000588275 TBX21Q9UL17 535 aa19.9■□□□□ 0.78
LINC01842-201ENST00000588275 DDX49Q9Y6V7 483 aaKnown RBP19.9■□□□□ 0.78
LINC01842-201ENST00000588275 SOWAHBA6NEL2 793 aa19.89■□□□□ 0.77
LINC01842-201ENST00000588275 ASB14A6NK59 587 aa19.89■□□□□ 0.77
LINC01842-201ENST00000588275 LRRC37A2A6NM11 1700 aa19.89■□□□□ 0.77
LINC01842-201ENST00000588275 ARVCFO00192 962 aa19.89■□□□□ 0.77
LINC01842-201ENST00000588275 FOXP2O15409 715 aa19.89■□□□□ 0.77
LINC01842-201ENST00000588275 TLR3O15455 904 aaKnown RBP19.89■□□□□ 0.77
LINC01842-201ENST00000588275 TKFCQ3LXA3 575 aa19.89■□□□□ 0.77
LINC01842-201ENST00000588275 EYSQ5T1H1 3165 aa19.89■□□□□ 0.77
LINC01842-201ENST00000588275 ANKRD45Q5TZF3 282 aa19.89■□□□□ 0.77
LINC01842-201ENST00000588275 VPS53Q5VIR6 699 aa19.89■□□□□ 0.77
LINC01842-201ENST00000588275 RCSD1Q6JBY9 416 aa19.89■□□□□ 0.77
LINC01842-201ENST00000588275 EEPD1Q7L9B9 569 aa19.89■□□□□ 0.77
LINC01842-201ENST00000588275 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.89■□□□□ 0.77
LINC01842-201ENST00000588275 CDH23Q9H251 3354 aa19.89■□□□□ 0.77
LINC01842-201ENST00000588275 IL17RBQ9NRM6 502 aa19.89■□□□□ 0.77
LINC01842-201ENST00000588275 PRR12Q9ULL5 1215 aa19.89■□□□□ 0.77
LINC01842-201ENST00000588275 PPIGQ13427 754 aaKnown RBP eCLIP19.88■□□□□ 0.77
LINC01842-201ENST00000588275 MUM1L1Q5H9M0 696 aa19.88■□□□□ 0.77
LINC01842-201ENST00000588275 RRP12Q5JTH9 1297 aaKnown RBP19.88■□□□□ 0.77
LINC01842-201ENST00000588275 MFSD5Q6N075 450 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms