RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 PTPN18Q99952 460 aa16.73■□□□□ 0.27
CCDC43-203ENST00000588210 NBPF3Q9H094 633 aa16.73■□□□□ 0.27
CCDC43-203ENST00000588210 RNF41Q9H4P4 317 aaPredicted RBP16.73■□□□□ 0.27
CCDC43-203ENST00000588210 KCND1Q9NSA2 647 aa16.73■□□□□ 0.27
CCDC43-203ENST00000588210 CCDC69A6NI79 296 aa16.72■□□□□ 0.27
CCDC43-203ENST00000588210 KIF28PB7ZC32 967 aa16.72■□□□□ 0.27
CCDC43-203ENST00000588210 C19orf81C9J6K1 198 aa16.72■□□□□ 0.27
CCDC43-203ENST00000588210 USP17L10C9JJH3 530 aa16.72■□□□□ 0.27
CCDC43-203ENST00000588210 BACE1P56817 501 aa16.72■□□□□ 0.27
CCDC43-203ENST00000588210 GSDMDP57764 484 aa16.72■□□□□ 0.27
CCDC43-203ENST00000588210 AKNAD1Q5T1N1 836 aa16.72■□□□□ 0.27
CCDC43-203ENST00000588210 ANO1Q5XXA6 986 aa16.72■□□□□ 0.27
CCDC43-203ENST00000588210 KANSL2Q9H9L4 492 aa16.72■□□□□ 0.27
CCDC43-203ENST00000588210 SAGE1Q9NXZ1 904 aa16.72■□□□□ 0.27
CCDC43-203ENST00000588210 IGF2BP3O00425 579 aaKnown RBP eCLIP16.71■□□□□ 0.27
CCDC43-203ENST00000588210 ORC4O43929 436 aa16.71■□□□□ 0.27
CCDC43-203ENST00000588210 ARID5BQ14865 1188 aa16.71■□□□□ 0.27
CCDC43-203ENST00000588210 SH3D19Q5HYK7 790 aa16.71■□□□□ 0.27
CCDC43-203ENST00000588210 MFSD6Q6ZSS7 791 aa16.71■□□□□ 0.27
CCDC43-203ENST00000588210 STAG1Q8WVM7 1258 aa16.71■□□□□ 0.27
CCDC43-203ENST00000588210 ARID3AQ99856 593 aa16.71■□□□□ 0.27
CCDC43-203ENST00000588210 RNF186Q9NXI6 227 aa16.71■□□□□ 0.27
CCDC43-203ENST00000588210 IMPACTQ9P2X3 320 aa16.71■□□□□ 0.27
CCDC43-203ENST00000588210 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.71■□□□□ 0.27
CCDC43-203ENST00000588210 NT5C2P49902 561 aa16.71■□□□□ 0.27
CCDC43-203ENST00000588210 TRDNQ13061 729 aa16.71■□□□□ 0.27
CCDC43-203ENST00000588210 MOGSQ13724 837 aa16.71■□□□□ 0.27
CCDC43-203ENST00000588210 DPCR1Q3MIW9 517 aa16.71■□□□□ 0.27
CCDC43-203ENST00000588210 AXDND1Q5T1B0 1012 aaPredicted RBP16.71■□□□□ 0.27
CCDC43-203ENST00000588210 SYNE3Q6ZMZ3 975 aa16.71■□□□□ 0.27
CCDC43-203ENST00000588210 NYAP1Q6ZVC0 841 aa16.71■□□□□ 0.27
CCDC43-203ENST00000588210 PROCA1Q8NCQ7 364 aaPredicted RBP16.71■□□□□ 0.27
CCDC43-203ENST00000588210 ZCCHC17Q9NP64 241 aaKnown RBP16.71■□□□□ 0.27
CCDC43-203ENST00000588210 SH2B2O14492 632 aaPredicted RBP16.7■□□□□ 0.26
CCDC43-203ENST00000588210 CDKL5O76039 1030 aa16.7■□□□□ 0.26
CCDC43-203ENST00000588210 TSPY3P0CV98 308 aa16.7■□□□□ 0.26
CCDC43-203ENST00000588210 TSPY8P0CW00 308 aa16.7■□□□□ 0.26
CCDC43-203ENST00000588210 HSPA1AP0DMV8 641 aaKnown RBP16.7■□□□□ 0.26
CCDC43-203ENST00000588210 HSPA1BP0DMV9 641 aaKnown RBP16.7■□□□□ 0.26
CCDC43-203ENST00000588210 SKILP12757 684 aa16.7■□□□□ 0.26
CCDC43-203ENST00000588210 CMA1P23946 247 aa16.7■□□□□ 0.26
CCDC43-203ENST00000588210 ICA1Q05084 483 aa16.7■□□□□ 0.26
CCDC43-203ENST00000588210 NCBP1Q09161 790 aaKnown RBP16.7■□□□□ 0.26
CCDC43-203ENST00000588210 MTMR2Q13614 643 aa16.7■□□□□ 0.26
CCDC43-203ENST00000588210 ZRSR1Q15695 479 aaKnown RBP16.7■□□□□ 0.26
CCDC43-203ENST00000588210 ANKRD23Q86SG2 305 aa16.7■□□□□ 0.26
CCDC43-203ENST00000588210 TBC1D10CQ8IV04 446 aa16.7■□□□□ 0.26
CCDC43-203ENST00000588210 NEDD1Q8NHV4 660 aa16.7■□□□□ 0.26
CCDC43-203ENST00000588210 ERCC4Q92889 916 aaPredicted RBP16.7■□□□□ 0.26
CCDC43-203ENST00000588210 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.7■□□□□ 0.26
CCDC43-203ENST00000588210 INCENPQ9NQS7 918 aa16.7■□□□□ 0.26
CCDC43-203ENST00000588210 TACC3Q9Y6A5 838 aa16.7■□□□□ 0.26
CCDC43-203ENST00000588210 PTPRFP10586 1907 aa16.7■□□□□ 0.26
CCDC43-203ENST00000588210 BTBD19C9JJ37 291 aa16.69■□□□□ 0.26
CCDC43-203ENST00000588210 USP14P54578 494 aa16.69■□□□□ 0.26
CCDC43-203ENST00000588210 HMGCS2P54868 508 aa16.69■□□□□ 0.26
CCDC43-203ENST00000588210 NLRP12P59046 1061 aa16.69■□□□□ 0.26
CCDC43-203ENST00000588210 TFAP4Q01664 338 aa16.69■□□□□ 0.26
CCDC43-203ENST00000588210 PPP4R3BQ5MIZ7 849 aa16.69■□□□□ 0.26
CCDC43-203ENST00000588210 CEP135Q66GS9 1140 aa16.69■□□□□ 0.26
CCDC43-203ENST00000588210 NBPF11Q86T75 865 aa16.69■□□□□ 0.26
CCDC43-203ENST00000588210 RAB11FIP4Q86YS3 637 aa16.69■□□□□ 0.26
CCDC43-203ENST00000588210 CCDC112Q8NEF3 446 aa16.69■□□□□ 0.26
CCDC43-203ENST00000588210 KIAA1683Q9H0B3 1180 aa16.69■□□□□ 0.26
CCDC43-203ENST00000588210 ARHGEF10LQ9HCE6 1279 aa16.69■□□□□ 0.26
CCDC43-203ENST00000588210 TOMM22Q9NS69 142 aa16.69■□□□□ 0.26
CCDC43-203ENST00000588210 PLIN4Q96Q06 1357 aa16.69■□□□□ 0.26
CCDC43-203ENST00000588210 TSPY2A6NKD2 308 aa16.69■□□□□ 0.26
CCDC43-203ENST00000588210 TRPA1O75762 1119 aa16.69■□□□□ 0.26
CCDC43-203ENST00000588210 ZNF202O95125 648 aa16.69■□□□□ 0.26
CCDC43-203ENST00000588210 GADL1Q6ZQY3 521 aa16.69■□□□□ 0.26
CCDC43-203ENST00000588210 FILIP1Q7Z7B0 1213 aa16.69■□□□□ 0.26
CCDC43-203ENST00000588210 TIGD1Q96MW7 591 aa16.69■□□□□ 0.26
CCDC43-203ENST00000588210 FEZ1Q99689 392 aa16.69■□□□□ 0.26
CCDC43-203ENST00000588210 CFHR5Q9BXR6 569 aa16.69■□□□□ 0.26
CCDC43-203ENST00000588210 GJB4Q9NTQ9 266 aa16.69■□□□□ 0.26
CCDC43-203ENST00000588210 TMOD4Q9NZQ9 345 aa16.69■□□□□ 0.26
CCDC43-203ENST00000588210 GREB1LQ9C091 1923 aaPredicted RBP16.69■□□□□ 0.26
CCDC43-203ENST00000588210 IGKV6D-41A0A0C4DH26 115 aa16.68■□□□□ 0.26
CCDC43-203ENST00000588210 RANBP6O60518 1105 aaKnown RBP16.68■□□□□ 0.26
CCDC43-203ENST00000588210 PFKFB1P16118 471 aa16.68■□□□□ 0.26
CCDC43-203ENST00000588210 METAP2P50579 478 aaKnown RBP eCLIP16.68■□□□□ 0.26
CCDC43-203ENST00000588210 SLC39A14Q15043 492 aa16.68■□□□□ 0.26
CCDC43-203ENST00000588210 FAM47AQ5JRC9 791 aa16.68■□□□□ 0.26
CCDC43-203ENST00000588210 GPAT2Q6NUI2 795 aa16.68■□□□□ 0.26
CCDC43-203ENST00000588210 USP17L2Q6R6M4 530 aa16.68■□□□□ 0.26
CCDC43-203ENST00000588210 SIAH1Q8IUQ4 282 aa16.68■□□□□ 0.26
CCDC43-203ENST00000588210 ACER1Q8TDN7 264 aa16.68■□□□□ 0.26
CCDC43-203ENST00000588210 SH2D4AQ9H788 454 aa16.68■□□□□ 0.26
CCDC43-203ENST00000588210 SLC45A1Q9Y2W3 748 aa16.68■□□□□ 0.26
CCDC43-203ENST00000588210 USP27XA6NNY8 438 aa16.68■□□□□ 0.26
CCDC43-203ENST00000588210 DHX8Q14562 1220 aaKnown RBP16.68■□□□□ 0.26
CCDC43-203ENST00000588210 RRP12Q5JTH9 1297 aaKnown RBP16.68■□□□□ 0.26
CCDC43-203ENST00000588210 CYB5R4Q7L1T6 521 aa16.68■□□□□ 0.26
CCDC43-203ENST00000588210 TMEM87BQ96K49 555 aa16.68■□□□□ 0.26
CCDC43-203ENST00000588210 ALG1Q9BT22 464 aa16.68■□□□□ 0.26
CCDC43-203ENST00000588210 NYAP2Q9P242 653 aa16.68■□□□□ 0.26
CCDC43-203ENST00000588210 AGTPBP1Q9UPW5 1226 aa16.68■□□□□ 0.26
CCDC43-203ENST00000588210 TMX2Q9Y320 296 aa16.68■□□□□ 0.26
CCDC43-203ENST00000588210 A0A1W2PRG0 241 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms