RNA–Protein interactions for RNA: ENST00000587582.1

CDH20-204, Transcript of cadherin 20, humanhuman

TSL 4

Gene CDH20, Length 533 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20-204ENST00000587582 STOX1Q6ZVD7 989 aa16.17■□□□□ 0.18
CDH20-204ENST00000587582 CHST3Q7LGC8 479 aa16.17■□□□□ 0.18
CDH20-204ENST00000587582 CHST13Q8NET6 341 aa16.17■□□□□ 0.18
CDH20-204ENST00000587582 NCOA7Q8NI08 942 aa16.17■□□□□ 0.18
CDH20-204ENST00000587582 DIS3LQ8TF46 1054 aaKnown RBP16.17■□□□□ 0.18
CDH20-204ENST00000587582 LSG1Q9H089 658 aaKnown RBP16.17■□□□□ 0.18
CDH20-204ENST00000587582 CRISPLD2Q9H0B8 497 aa16.17■□□□□ 0.18
CDH20-204ENST00000587582 CPVLQ9H3G5 476 aa16.17■□□□□ 0.18
CDH20-204ENST00000587582 ACAD9Q9H845 621 aa16.17■□□□□ 0.18
CDH20-204ENST00000587582 FBXO40Q9UH90 709 aa16.17■□□□□ 0.18
CDH20-204ENST00000587582 CCPG1Q9ULG6 757 aa16.17■□□□□ 0.18
CDH20-204ENST00000587582 TNRC18O15417 2968 aaPredicted RBP16.16■□□□□ 0.18
CDH20-204ENST00000587582 CYBAP13498 195 aa16.16■□□□□ 0.18
CDH20-204ENST00000587582 ZNF792Q3KQV3 632 aa16.16■□□□□ 0.18
CDH20-204ENST00000587582 ANO1Q5XXA6 986 aa16.16■□□□□ 0.18
CDH20-204ENST00000587582 TRPV1Q8NER1 839 aa16.16■□□□□ 0.18
CDH20-204ENST00000587582 TRERF1Q96PN7 1200 aa16.16■□□□□ 0.18
CDH20-204ENST00000587582 UBA5Q9GZZ9 404 aa16.16■□□□□ 0.18
CDH20-204ENST00000587582 ERICH2A1L162 156 aa16.15■□□□□ 0.18
CDH20-204ENST00000587582 IFIT3O14879 490 aaKnown RBP16.15■□□□□ 0.18
CDH20-204ENST00000587582 DHX16O60231 1041 aaKnown RBP16.15■□□□□ 0.18
CDH20-204ENST00000587582 SNHG28P0DPA3 235 aa16.15■□□□□ 0.18
CDH20-204ENST00000587582 GPATCH4Q5T3I0 446 aaKnown RBP16.15■□□□□ 0.18
CDH20-204ENST00000587582 BTNL9Q6UXG8 535 aa16.15■□□□□ 0.18
CDH20-204ENST00000587582 DPF3Q92784 378 aa16.15■□□□□ 0.18
CDH20-204ENST00000587582 PAWRQ96IZ0 340 aaKnown RBP16.15■□□□□ 0.18
CDH20-204ENST00000587582 RANBP17Q9H2T7 1088 aaKnown RBP16.15■□□□□ 0.18
CDH20-204ENST00000587582 DDX20Q9UHI6 824 aaKnown RBP16.15■□□□□ 0.18
CDH20-204ENST00000587582 MYCNP04198 464 aaPredicted RBP16.14■□□□□ 0.17
CDH20-204ENST00000587582 ICAM1P05362 532 aa16.14■□□□□ 0.17
CDH20-204ENST00000587582 MUM1L1Q5H9M0 696 aa16.14■□□□□ 0.17
CDH20-204ENST00000587582 LHX8Q68G74 356 aa16.14■□□□□ 0.17
CDH20-204ENST00000587582 NSMFQ6X4W1 530 aa16.14■□□□□ 0.17
CDH20-204ENST00000587582 ANKS1AQ92625 1134 aa16.14■□□□□ 0.17
CDH20-204ENST00000587582 TINF2Q9BSI4 451 aa16.14■□□□□ 0.17
CDH20-204ENST00000587582 PPP4R2Q9NY27 417 aa16.14■□□□□ 0.17
CDH20-204ENST00000587582 OGDHLQ9ULD0 1010 aa16.14■□□□□ 0.17
CDH20-204ENST00000587582 ZNFX1Q9P2E3 1918 aaKnown RBP16.13■□□□□ 0.17
CDH20-204ENST00000587582 PDE4DIPQ5VU43 2346 aa16.13■□□□□ 0.17
CDH20-204ENST00000587582 POTEB2H3BUK9 544 aa16.13■□□□□ 0.17
CDH20-204ENST00000587582 SLC27A2O14975 620 aa16.13■□□□□ 0.17
CDH20-204ENST00000587582 PARP1P09874 1014 aaKnown RBP16.13■□□□□ 0.17
CDH20-204ENST00000587582 SART3Q15020 963 aaKnown RBP16.13■□□□□ 0.17
CDH20-204ENST00000587582 SEC23AQ15436 765 aa16.13■□□□□ 0.17
CDH20-204ENST00000587582 TKFCQ3LXA3 575 aa16.13■□□□□ 0.17
CDH20-204ENST00000587582 ASPRV1Q53RT3 343 aa16.13■□□□□ 0.17
CDH20-204ENST00000587582 CREB3L3Q68CJ9 461 aa16.13■□□□□ 0.17
CDH20-204ENST00000587582 NECAB2Q7Z6G3 386 aa16.13■□□□□ 0.17
CDH20-204ENST00000587582 UBE2Q1Q7Z7E8 422 aa16.13■□□□□ 0.17
CDH20-204ENST00000587582 HTATIP2Q9BUP3 242 aa16.13■□□□□ 0.17
CDH20-204ENST00000587582 A1CFQ9NQ94 594 aaKnown RBP16.13■□□□□ 0.17
CDH20-204ENST00000587582 CNPY2Q9Y2B0 182 aa16.13■□□□□ 0.17
CDH20-204ENST00000587582 DIS3Q9Y2L1 958 aaKnown RBP16.13■□□□□ 0.17
CDH20-204ENST00000587582 PLXNA1Q9UIW2 1896 aa16.13■□□□□ 0.17
CDH20-204ENST00000587582 DNAJC25-GNG10A0A024R161 153 aa16.12■□□□□ 0.17
CDH20-204ENST00000587582 MSCO60682 206 aa16.12■□□□□ 0.17
CDH20-204ENST00000587582 IGHA2P01877 340 aa16.12■□□□□ 0.17
CDH20-204ENST00000587582 CNTN2Q02246 1040 aa16.12■□□□□ 0.17
CDH20-204ENST00000587582 WTAPQ15007 396 aa16.12■□□□□ 0.17
CDH20-204ENST00000587582 USH1GQ495M9 461 aa16.12■□□□□ 0.17
CDH20-204ENST00000587582 TMEM67Q5HYA8 995 aa16.12■□□□□ 0.17
CDH20-204ENST00000587582 PRPF38BQ5VTL8 546 aaKnown RBP16.12■□□□□ 0.17
CDH20-204ENST00000587582 ANKLE1Q8NAG6 615 aa16.12■□□□□ 0.17
CDH20-204ENST00000587582 SENP2Q9HC62 589 aa16.12■□□□□ 0.17
CDH20-204ENST00000587582 VAT1LQ9HCJ6 419 aa16.12■□□□□ 0.17
CDH20-204ENST00000587582 ZHX1Q9UKY1 873 aaPredicted RBP16.12■□□□□ 0.17
CDH20-204ENST00000587582 SEPT4O43236 478 aa16.11■□□□□ 0.17
CDH20-204ENST00000587582 ANTXR2P58335 489 aa16.11■□□□□ 0.17
CDH20-204ENST00000587582 CDC37Q16543 378 aaPredicted RBP16.11■□□□□ 0.17
CDH20-204ENST00000587582 MB21D2Q8IYB1 491 aaPredicted RBP16.11■□□□□ 0.17
CDH20-204ENST00000587582 C11orf49Q9H6J7 331 aa16.11■□□□□ 0.17
CDH20-204ENST00000587582 PFASO15067 1338 aa16.11■□□□□ 0.17
CDH20-204ENST00000587582 PTPDC1A2A3K4 754 aa16.1■□□□□ 0.17
CDH20-204ENST00000587582 NFIBO00712 420 aa16.1■□□□□ 0.17
CDH20-204ENST00000587582 PRC1O43663 620 aa16.1■□□□□ 0.17
CDH20-204ENST00000587582 CAPN2P17655 700 aa16.1■□□□□ 0.17
CDH20-204ENST00000587582 MNX1P50219 401 aaPredicted RBP16.1■□□□□ 0.17
CDH20-204ENST00000587582 RNF20Q5VTR2 975 aa16.1■□□□□ 0.17
CDH20-204ENST00000587582 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.1■□□□□ 0.17
CDH20-204ENST00000587582 ADGRF4Q8IZF3 695 aa16.1■□□□□ 0.17
CDH20-204ENST00000587582 STAG2Q8N3U4 1231 aa16.1■□□□□ 0.17
CDH20-204ENST00000587582 FGD4Q96M96 766 aa16.1■□□□□ 0.17
CDH20-204ENST00000587582 SNAI1O95863 264 aaPredicted RBP16.09■□□□□ 0.17
CDH20-204ENST00000587582 NECTIN1Q15223 517 aa16.09■□□□□ 0.17
CDH20-204ENST00000587582 GJC2Q5T442 439 aaPredicted RBP16.09■□□□□ 0.17
CDH20-204ENST00000587582 NFXL1Q6ZNB6 911 aa16.09■□□□□ 0.17
CDH20-204ENST00000587582 ARMCX2Q7L311 632 aa16.09■□□□□ 0.17
CDH20-204ENST00000587582 CATIPQ7Z7H3 387 aa16.09■□□□□ 0.17
CDH20-204ENST00000587582 CCDC144CPQ8IYA2 1237 aa16.09■□□□□ 0.17
CDH20-204ENST00000587582 FAM133AQ8N9E0 248 aa16.09■□□□□ 0.17
CDH20-204ENST00000587582 NUP133Q8WUM0 1156 aa16.09■□□□□ 0.17
CDH20-204ENST00000587582 LENG1Q96BZ8 264 aaPredicted RBP16.09■□□□□ 0.17
CDH20-204ENST00000587582 PURBQ96QR8 312 aaKnown RBP16.09■□□□□ 0.17
CDH20-204ENST00000587582 GPHNQ9NQX3 736 aaPredicted RBP16.09■□□□□ 0.17
CDH20-204ENST00000587582 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.09■□□□□ 0.17
CDH20-204ENST00000587582 CYP39A1Q9NYL5 469 aa16.09■□□□□ 0.17
CDH20-204ENST00000587582 NRBP1Q9UHY1 535 aa16.09■□□□□ 0.17
CDH20-204ENST00000587582 DDX49Q9Y6V7 483 aaKnown RBP16.09■□□□□ 0.17
CDH20-204ENST00000587582 SYNGAP1Q96PV0 1343 aa16.09■□□□□ 0.17
CDH20-204ENST00000587582 FRMPD3Q5JV73 1810 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms