RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 ARMT1Q9H993 441 aa10.3□□□□□ -0.76
SDF2-204ENST00000587338 RCAN3Q9UKA8 241 aa10.3□□□□□ -0.76
SDF2-204ENST00000587338 NOP58Q9Y2X3 529 aaKnown RBP10.3□□□□□ -0.76
SDF2-204ENST00000587338 RIPK3Q9Y572 518 aa10.3□□□□□ -0.76
SDF2-204ENST00000587338 SLC4A7Q9Y6M7 1214 aa10.3□□□□□ -0.76
SDF2-204ENST00000587338 DNAJC25-GNG10A0A024R161 153 aa10.29□□□□□ -0.76
SDF2-204ENST00000587338 SMIM22K7EJ46 135 aa10.29□□□□□ -0.76
SDF2-204ENST00000587338 ERC2O15083 957 aa10.29□□□□□ -0.76
SDF2-204ENST00000587338 PRKAB2O43741 272 aa10.29□□□□□ -0.76
SDF2-204ENST00000587338 GTPBP6O43824 516 aaPredicted RBP10.29□□□□□ -0.76
SDF2-204ENST00000587338 CDK8P49336 464 aa10.29□□□□□ -0.76
SDF2-204ENST00000587338 TMEM31Q5JXX7 168 aa10.29□□□□□ -0.76
SDF2-204ENST00000587338 CXCL17Q6UXB2 119 aa10.29□□□□□ -0.76
SDF2-204ENST00000587338 ARMCX2Q7L311 632 aa10.29□□□□□ -0.76
SDF2-204ENST00000587338 ZNF467Q7Z7K2 595 aaPredicted RBP10.29□□□□□ -0.76
SDF2-204ENST00000587338 AMOTL1Q8IY63 956 aa10.29□□□□□ -0.76
SDF2-204ENST00000587338 CPXCR1Q8N123 301 aa10.29□□□□□ -0.76
SDF2-204ENST00000587338 DNAJC2Q99543 621 aaKnown RBP10.29□□□□□ -0.76
SDF2-204ENST00000587338 SLF1Q9BQI6 1058 aa10.29□□□□□ -0.76
SDF2-204ENST00000587338 ABHD16BQ9H3Z7 469 aa10.29□□□□□ -0.76
SDF2-204ENST00000587338 KANSL2Q9H9L4 492 aa10.29□□□□□ -0.76
SDF2-204ENST00000587338 ARIH1Q9Y4X5 557 aaPredicted RBP10.29□□□□□ -0.76
SDF2-204ENST00000587338 CTDP1Q9Y5B0 961 aaPredicted RBP10.29□□□□□ -0.76
SDF2-204ENST00000587338 PCDHA11Q9Y5I1 949 aa10.29□□□□□ -0.76
SDF2-204ENST00000587338 MCM3APO60318 1980 aa10.28□□□□□ -0.76
SDF2-204ENST00000587338 TCRBV5S4A2TA0A5A2 114 aa10.28□□□□□ -0.76
SDF2-204ENST00000587338 FAM86C2PA6NEL3 165 aa10.28□□□□□ -0.76
SDF2-204ENST00000587338 RFXAPO00287 272 aa10.28□□□□□ -0.76
SDF2-204ENST00000587338 GOLIM4O00461 696 aa10.28□□□□□ -0.76
SDF2-204ENST00000587338 MBD4O95243 580 aa10.28□□□□□ -0.76
SDF2-204ENST00000587338 ATP2A2P16615 1042 aaKnown RBP10.28□□□□□ -0.76
SDF2-204ENST00000587338 C16orf86Q6ZW13 317 aa10.28□□□□□ -0.76
SDF2-204ENST00000587338 ANKRD35Q8N283 1001 aa10.28□□□□□ -0.76
SDF2-204ENST00000587338 FGD4Q96M96 766 aa10.28□□□□□ -0.76
SDF2-204ENST00000587338 NOC4LQ9BVI4 516 aaKnown RBP10.28□□□□□ -0.76
SDF2-204ENST00000587338 TRPV6Q9H1D0 765 aa10.28□□□□□ -0.76
SDF2-204ENST00000587338 WNT8AQ9H1J5 351 aa10.28□□□□□ -0.76
SDF2-204ENST00000587338 CERS4Q9HA82 394 aa10.28□□□□□ -0.76
SDF2-204ENST00000587338 EXOC6BQ9Y2D4 811 aa10.28□□□□□ -0.76
SDF2-204ENST00000587338 MTCH2Q9Y6C9 303 aa10.28□□□□□ -0.76
SDF2-204ENST00000587338 BRWD1Q9NSI6 2320 aa10.27□□□□□ -0.77
SDF2-204ENST00000587338 CTAGE5O15320 804 aa10.27□□□□□ -0.77
SDF2-204ENST00000587338 CABYRO75952 493 aa10.27□□□□□ -0.77
SDF2-204ENST00000587338 CA3P07451 260 aa10.27□□□□□ -0.77
SDF2-204ENST00000587338 ITGA7Q13683 1181 aa10.27□□□□□ -0.77
SDF2-204ENST00000587338 SLFNL1Q499Z3 407 aa10.27□□□□□ -0.77
SDF2-204ENST00000587338 C12orf60Q5U649 245 aa10.27□□□□□ -0.77
SDF2-204ENST00000587338 KRT40Q6A162 431 aa10.27□□□□□ -0.77
SDF2-204ENST00000587338 TLK2Q86UE8 772 aa10.27□□□□□ -0.77
SDF2-204ENST00000587338 ERC1Q8IUD2 1116 aa10.27□□□□□ -0.77
SDF2-204ENST00000587338 CCDC144CPQ8IYA2 1237 aa10.27□□□□□ -0.77
SDF2-204ENST00000587338 RPUSD2Q8IZ73 545 aaKnown RBP10.27□□□□□ -0.77
SDF2-204ENST00000587338 DDRGK1Q96HY6 314 aa10.27□□□□□ -0.77
SDF2-204ENST00000587338 SCLYQ96I15 445 aa10.27□□□□□ -0.77
SDF2-204ENST00000587338 BCL11AQ9H165 835 aa10.27□□□□□ -0.77
SDF2-204ENST00000587338 RAVER2Q9HCJ3 691 aaKnown RBP10.27□□□□□ -0.77
SDF2-204ENST00000587338 IL1RAPL2Q9NP60 686 aa10.27□□□□□ -0.77
SDF2-204ENST00000587338 HOMER2Q9NSB8 354 aa10.27□□□□□ -0.77
SDF2-204ENST00000587338 ATP8A2Q9NTI2 1148 aa10.27□□□□□ -0.77
SDF2-204ENST00000587338 GTF3C3Q9Y5Q9 886 aa10.27□□□□□ -0.77
SDF2-204ENST00000587338 BAZ2AQ9UIF9 1905 aaKnown RBP10.27□□□□□ -0.77
SDF2-204ENST00000587338 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.26□□□□□ -0.77
SDF2-204ENST00000587338 EPOPA6NHQ4 379 aa10.26□□□□□ -0.77
SDF2-204ENST00000587338 USP17L12C9JPN9 530 aa10.26□□□□□ -0.77
SDF2-204ENST00000587338 USP17L21D6R901 530 aa10.26□□□□□ -0.77
SDF2-204ENST00000587338 B4GALT4O60513 344 aa10.26□□□□□ -0.77
SDF2-204ENST00000587338 ZBED4O75132 1171 aa10.26□□□□□ -0.77
SDF2-204ENST00000587338 NDUFB10O96000 172 aa10.26□□□□□ -0.77
SDF2-204ENST00000587338 PSMC6P62333 389 aa10.26□□□□□ -0.77
SDF2-204ENST00000587338 IRX6P78412 446 aaPredicted RBP10.26□□□□□ -0.77
SDF2-204ENST00000587338 TNFAIP2Q03169 654 aa10.26□□□□□ -0.77
SDF2-204ENST00000587338 TTLL4Q14679 1199 aa10.26□□□□□ -0.77
SDF2-204ENST00000587338 FSCN1Q16658 493 aaKnown RBP10.26□□□□□ -0.77
SDF2-204ENST00000587338 TMEM67Q5HYA8 995 aa10.26□□□□□ -0.77
SDF2-204ENST00000587338 ZKSCAN2Q63HK3 967 aa10.26□□□□□ -0.77
SDF2-204ENST00000587338 ITPRIPQ8IWB1 547 aa10.26□□□□□ -0.77
SDF2-204ENST00000587338 PRPF38AQ8NAV1 312 aaKnown RBP10.26□□□□□ -0.77
SDF2-204ENST00000587338 SLC43A3Q8NBI5 491 aa10.26□□□□□ -0.77
SDF2-204ENST00000587338 ARNTL2Q8WYA1 636 aa10.26□□□□□ -0.77
SDF2-204ENST00000587338 KIFC2Q96AC6 838 aa10.26□□□□□ -0.77
SDF2-204ENST00000587338 FBXO40Q9UH90 709 aa10.26□□□□□ -0.77
SDF2-204ENST00000587338 COG5Q9UP83 839 aa10.26□□□□□ -0.77
SDF2-204ENST00000587338 LRRC37A2A6NM11 1700 aa10.26□□□□□ -0.77
SDF2-204ENST00000587338 ASTN1O14525 1302 aa10.26□□□□□ -0.77
SDF2-204ENST00000587338 F5H6K3 240 aa10.25□□□□□ -0.77
SDF2-204ENST00000587338 ATP2A1O14983 1001 aa10.25□□□□□ -0.77
SDF2-204ENST00000587338 TLL1O43897 1013 aa10.25□□□□□ -0.77
SDF2-204ENST00000587338 PTGS1P23219 599 aa10.25□□□□□ -0.77
SDF2-204ENST00000587338 NKX3-2P78367 333 aa10.25□□□□□ -0.77
SDF2-204ENST00000587338 CNTN2Q02246 1040 aa10.25□□□□□ -0.77
SDF2-204ENST00000587338 KLRC3Q07444 240 aa10.25□□□□□ -0.77
SDF2-204ENST00000587338 DEFB128Q7Z7B8 93 aa10.25□□□□□ -0.77
SDF2-204ENST00000587338 FTSJ3Q8IY81 847 aaKnown RBP10.25□□□□□ -0.77
SDF2-204ENST00000587338 KHSRPQ92945 711 aaKnown RBP eCLIP10.25□□□□□ -0.77
SDF2-204ENST00000587338 HLA-CQ95604 372 aa10.25□□□□□ -0.77
SDF2-204ENST00000587338 KATNBL1Q9H079 304 aa10.25□□□□□ -0.77
SDF2-204ENST00000587338 AP5M1Q9H0R1 490 aa10.25□□□□□ -0.77
SDF2-204ENST00000587338 RNF216Q9NWF9 866 aaPredicted RBP10.25□□□□□ -0.77
SDF2-204ENST00000587338 WDFY4Q6ZS81 3184 aa10.25□□□□□ -0.77
SDF2-204ENST00000587338 GRIN2DO15399 1336 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms