RNA–Protein interactions for RNA: ENST00000586495.1

TRIM47-203, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 605 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-203ENST00000586495 HOMER2Q9NSB8 354 aa20.03■□□□□ 0.8
TRIM47-203ENST00000586495 SMCHD1A6NHR9 2005 aa20.03■□□□□ 0.8
TRIM47-203ENST00000586495 SNAI1O95863 264 aaPredicted RBP20.02■□□□□ 0.8
TRIM47-203ENST00000586495 TOP1P11387 765 aaKnown RBP20.02■□□□□ 0.8
TRIM47-203ENST00000586495 ADCYAP1R1P41586 468 aa20.02■□□□□ 0.8
TRIM47-203ENST00000586495 HAND2P61296 217 aa20.02■□□□□ 0.8
TRIM47-203ENST00000586495 CCDC96Q2M329 555 aa20.02■□□□□ 0.8
TRIM47-203ENST00000586495 AKNAD1Q5T1N1 836 aa20.02■□□□□ 0.8
TRIM47-203ENST00000586495 MFSD6Q6ZSS7 791 aa20.02■□□□□ 0.8
TRIM47-203ENST00000586495 TDHQ8IZJ6 230 aa20.02■□□□□ 0.8
TRIM47-203ENST00000586495 LBHD1Q9BQE6 289 aaPredicted RBP20.02■□□□□ 0.8
TRIM47-203ENST00000586495 DIAPH3Q9NSV4 1193 aa20.02■□□□□ 0.8
TRIM47-203ENST00000586495 ZHX1Q9UKY1 873 aaPredicted RBP20.02■□□□□ 0.8
TRIM47-203ENST00000586495 MTMR7Q9Y216 660 aa20.02■□□□□ 0.8
TRIM47-203ENST00000586495 ATP11BQ9Y2G3 1177 aa20.02■□□□□ 0.8
TRIM47-203ENST00000586495 SUPT16HQ9Y5B9 1047 aaKnown RBP20.02■□□□□ 0.8
TRIM47-203ENST00000586495 PGK1P00558 417 aa20.01■□□□□ 0.79
TRIM47-203ENST00000586495 C1orf53Q5VUE5 145 aa20.01■□□□□ 0.79
TRIM47-203ENST00000586495 AGBL1Q96MI9 1066 aa20.01■□□□□ 0.79
TRIM47-203ENST00000586495 ABHD16BQ9H3Z7 469 aa20.01■□□□□ 0.79
TRIM47-203ENST00000586495 RNF146Q9NTX7 359 aa20.01■□□□□ 0.79
TRIM47-203ENST00000586495 PRR12Q9ULL5 1215 aa20.01■□□□□ 0.79
TRIM47-203ENST00000586495 PHF24Q9UPV7 400 aa20.01■□□□□ 0.79
TRIM47-203ENST00000586495 ZNF536O15090 1300 aa20.01■□□□□ 0.79
TRIM47-203ENST00000586495 POTEB2H3BUK9 544 aa20■□□□□ 0.79
TRIM47-203ENST00000586495 ZNF213O14771 459 aa20■□□□□ 0.79
TRIM47-203ENST00000586495 ALAS1P13196 640 aa20■□□□□ 0.79
TRIM47-203ENST00000586495 NT5C2P49902 561 aa20■□□□□ 0.79
TRIM47-203ENST00000586495 MDM2Q00987 491 aaPredicted RBP20■□□□□ 0.79
TRIM47-203ENST00000586495 ACVR2BQ13705 512 aa20■□□□□ 0.79
TRIM47-203ENST00000586495 SNX17Q15036 470 aa20■□□□□ 0.79
TRIM47-203ENST00000586495 LRIT3Q3SXY7 679 aa20■□□□□ 0.79
TRIM47-203ENST00000586495 CWC27Q6UX04 472 aaKnown RBP20■□□□□ 0.79
TRIM47-203ENST00000586495 FERMT2Q96AC1 680 aa20■□□□□ 0.79
TRIM47-203ENST00000586495 TTC14Q96N46 770 aa20■□□□□ 0.79
TRIM47-203ENST00000586495 TRERF1Q96PN7 1200 aa20■□□□□ 0.79
TRIM47-203ENST00000586495 TMEM47Q9BQJ4 181 aa20■□□□□ 0.79
TRIM47-203ENST00000586495 CDKN2AIPQ9NXV6 580 aaPredicted RBP20■□□□□ 0.79
TRIM47-203ENST00000586495 CCDC174Q6PII3 467 aa19.99■□□□□ 0.79
TRIM47-203ENST00000586495 ESR2Q92731 530 aa19.99■□□□□ 0.79
TRIM47-203ENST00000586495 TSEN34Q9BSV6 310 aaKnown RBP19.99■□□□□ 0.79
TRIM47-203ENST00000586495 A1CFQ9NQ94 594 aaKnown RBP19.99■□□□□ 0.79
TRIM47-203ENST00000586495 SOX1O00570 391 aaPredicted RBP19.98■□□□□ 0.79
TRIM47-203ENST00000586495 ADAMTS4O75173 837 aa19.98■□□□□ 0.79
TRIM47-203ENST00000586495 DUSP11O75319 330 aaKnown RBP19.98■□□□□ 0.79
TRIM47-203ENST00000586495 CNTN2Q02246 1040 aa19.98■□□□□ 0.79
TRIM47-203ENST00000586495 TRIM60Q495X7 471 aa19.98■□□□□ 0.79
TRIM47-203ENST00000586495 BTNL9Q6UXG8 535 aa19.98■□□□□ 0.79
TRIM47-203ENST00000586495 ARMCX2Q7L311 632 aa19.98■□□□□ 0.79
TRIM47-203ENST00000586495 FAM133AQ8N9E0 248 aa19.98■□□□□ 0.79
TRIM47-203ENST00000586495 FGD4Q96M96 766 aa19.98■□□□□ 0.79
TRIM47-203ENST00000586495 SPC25Q9HBM1 224 aa19.98■□□□□ 0.79
TRIM47-203ENST00000586495 CCPG1Q9ULG6 757 aa19.98■□□□□ 0.79
TRIM47-203ENST00000586495 RANBP2P49792 3224 aaKnown RBP19.97■□□□□ 0.79
TRIM47-203ENST00000586495 ASB14A6NK59 587 aa19.97■□□□□ 0.79
TRIM47-203ENST00000586495 ICAM1P05362 532 aa19.97■□□□□ 0.79
TRIM47-203ENST00000586495 SNAP25P60880 206 aa19.97■□□□□ 0.79
TRIM47-203ENST00000586495 CCDC178Q5BJE1 867 aa19.97■□□□□ 0.79
TRIM47-203ENST00000586495 GPR153Q6NV75 609 aa19.97■□□□□ 0.79
TRIM47-203ENST00000586495 CCDC144CPQ8IYA2 1237 aa19.97■□□□□ 0.79
TRIM47-203ENST00000586495 LENG1Q96BZ8 264 aaPredicted RBP19.97■□□□□ 0.79
TRIM47-203ENST00000586495 LRCH3Q96II8 777 aa19.97■□□□□ 0.79
TRIM47-203ENST00000586495 PRDM5Q9NQX1 630 aaPredicted RBP19.97■□□□□ 0.79
TRIM47-203ENST00000586495 A0A1W2PQ45 241 aaPredicted RBP19.96■□□□□ 0.79
TRIM47-203ENST00000586495 A0A1W2PQY0 241 aa19.96■□□□□ 0.79
TRIM47-203ENST00000586495 MOXD2PA6NHM9 499 aa19.96■□□□□ 0.79
TRIM47-203ENST00000586495 SYDE2Q5VT97 1194 aa19.96■□□□□ 0.79
TRIM47-203ENST00000586495 TTBK2Q6IQ55 1244 aa19.96■□□□□ 0.79
TRIM47-203ENST00000586495 RASGRP2Q7LDG7 609 aa19.96■□□□□ 0.79
TRIM47-203ENST00000586495 TBC1D10CQ8IV04 446 aa19.96■□□□□ 0.79
TRIM47-203ENST00000586495 NUP133Q8WUM0 1156 aa19.96■□□□□ 0.79
TRIM47-203ENST00000586495 DSCC1Q9BVC3 393 aa19.96■□□□□ 0.79
TRIM47-203ENST00000586495 RANBP17Q9H2T7 1088 aaKnown RBP19.96■□□□□ 0.79
TRIM47-203ENST00000586495 GPCPD1Q9NPB8 672 aa19.96■□□□□ 0.79
TRIM47-203ENST00000586495 PNMA2Q9UL42 364 aa19.96■□□□□ 0.79
TRIM47-203ENST00000586495 FRMPD2Q68DX3 1309 aaPredicted RBP19.96■□□□□ 0.79
TRIM47-203ENST00000586495 SYNRGQ9UMZ2 1314 aa19.96■□□□□ 0.79
TRIM47-203ENST00000586495 PDHBP11177 359 aa19.95■□□□□ 0.78
TRIM47-203ENST00000586495 SLC16A2P36021 539 aa19.95■□□□□ 0.78
TRIM47-203ENST00000586495 CCDC144BQ3MJ40 725 aa19.95■□□□□ 0.78
TRIM47-203ENST00000586495 IQCA1Q86XH1 822 aa19.95■□□□□ 0.78
TRIM47-203ENST00000586495 DGKHQ86XP1 1220 aa19.95■□□□□ 0.78
TRIM47-203ENST00000586495 KLHDC9Q8NEP7 349 aa19.95■□□□□ 0.78
TRIM47-203ENST00000586495 CTNNA3Q9UI47 895 aa19.95■□□□□ 0.78
TRIM47-203ENST00000586495 C6orf222P0C671 652 aaPredicted RBP19.94■□□□□ 0.78
TRIM47-203ENST00000586495 CST5P28325 142 aaPredicted RBP19.94■□□□□ 0.78
TRIM47-203ENST00000586495 ACLYP53396 1101 aa19.94■□□□□ 0.78
TRIM47-203ENST00000586495 TLE2Q04725 743 aa19.94■□□□□ 0.78
TRIM47-203ENST00000586495 KCNA10Q16322 511 aa19.94■□□□□ 0.78
TRIM47-203ENST00000586495 IMMTQ16891 758 aaKnown RBP19.94■□□□□ 0.78
TRIM47-203ENST00000586495 MUM1L1Q5H9M0 696 aa19.94■□□□□ 0.78
TRIM47-203ENST00000586495 NSMFQ6X4W1 530 aa19.94■□□□□ 0.78
TRIM47-203ENST00000586495 PCSK9Q8NBP7 692 aaKnown RBP19.94■□□□□ 0.78
TRIM47-203ENST00000586495 STARD7Q9NQZ5 370 aa19.94■□□□□ 0.78
TRIM47-203ENST00000586495 PDLIM7Q9NR12 457 aa19.94■□□□□ 0.78
TRIM47-203ENST00000586495 CYP39A1Q9NYL5 469 aa19.94■□□□□ 0.78
TRIM47-203ENST00000586495 SOWAHBA6NEL2 793 aa19.93■□□□□ 0.78
TRIM47-203ENST00000586495 GJA9P57773 515 aa19.93■□□□□ 0.78
TRIM47-203ENST00000586495 ZNF543Q08ER8 600 aa19.93■□□□□ 0.78
TRIM47-203ENST00000586495 GPATCH4Q5T3I0 446 aaKnown RBP19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms