RNA–Protein interactions for RNA: ENST00000586083.5

RNFT1-208, Transcript of ring finger protein, transmembrane 1, human

TSL 2

Gene RNFT1, Length 1,425 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNFT1-208	ENST00000586083	SYNRG	Q9UMZ2	1314 aa		13.97	□□□□□ -0.17
RNFT1-208	ENST00000586083	ZNFX1	Q9P2E3	1918 aa	Known RBP	13.96	□□□□□ -0.17
RNFT1-208	ENST00000586083	DCDC2C	A8MYV0	355 aa		13.96	□□□□□ -0.18
RNFT1-208	ENST00000586083	DLL1	O00548	723 aa		13.96	□□□□□ -0.18
RNFT1-208	ENST00000586083	ADAMTS4	O75173	837 aa		13.96	□□□□□ -0.18
RNFT1-208	ENST00000586083	DUSP11	O75319	330 aa	Known RBP	13.96	□□□□□ -0.18
RNFT1-208	ENST00000586083	RAG1	P15918	1043 aa		13.96	□□□□□ -0.18
RNFT1-208	ENST00000586083	ACLY	P53396	1101 aa		13.96	□□□□□ -0.18
RNFT1-208	ENST00000586083	ACVR2B	Q13705	512 aa		13.96	□□□□□ -0.18
RNFT1-208	ENST00000586083	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	13.96	□□□□□ -0.18
RNFT1-208	ENST00000586083	SH3RF1	Q7Z6J0	888 aa		13.96	□□□□□ -0.18
RNFT1-208	ENST00000586083	EVI5L	Q96CN4	794 aa		13.96	□□□□□ -0.18
RNFT1-208	ENST00000586083	GMCL1	Q96IK5	515 aa		13.96	□□□□□ -0.18
RNFT1-208	ENST00000586083	ACAD9	Q9H845	621 aa		13.96	□□□□□ -0.18
RNFT1-208	ENST00000586083	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	13.96	□□□□□ -0.18
RNFT1-208	ENST00000586083	PLXNA1	Q9UIW2	1896 aa		13.95	□□□□□ -0.18
RNFT1-208	ENST00000586083	C6orf222	P0C671	652 aa	Predicted RBP	13.95	□□□□□ -0.18
RNFT1-208	ENST00000586083	C9orf50	Q5SZB4	431 aa		13.95	□□□□□ -0.18
RNFT1-208	ENST00000586083	ANKRD45	Q5TZF3	282 aa		13.95	□□□□□ -0.18
RNFT1-208	ENST00000586083	ARMCX2	Q7L311	632 aa		13.95	□□□□□ -0.18
RNFT1-208	ENST00000586083	PCSK9	Q8NBP7	692 aa	Known RBP	13.95	□□□□□ -0.18
RNFT1-208	ENST00000586083	STAG1	Q8WVM7	1258 aa		13.95	□□□□□ -0.18
RNFT1-208	ENST00000586083	GLT1D1	Q96MS3	346 aa		13.95	□□□□□ -0.18
RNFT1-208	ENST00000586083	TMEM39A	Q9NV64	488 aa		13.95	□□□□□ -0.18
RNFT1-208	ENST00000586083	KIAA0355	O15063	1070 aa		13.94	□□□□□ -0.18
RNFT1-208	ENST00000586083	MCC	P23508	829 aa		13.94	□□□□□ -0.18
RNFT1-208	ENST00000586083	RRP1	P56182	461 aa	Known RBP	13.94	□□□□□ -0.18
RNFT1-208	ENST00000586083	KCNA10	Q16322	511 aa		13.94	□□□□□ -0.18
RNFT1-208	ENST00000586083	TKFC	Q3LXA3	575 aa		13.94	□□□□□ -0.18
RNFT1-208	ENST00000586083	CCDC144B	Q3MJ40	725 aa		13.94	□□□□□ -0.18
RNFT1-208	ENST00000586083	CCDC129	Q6ZRS4	1044 aa		13.94	□□□□□ -0.18
RNFT1-208	ENST00000586083	VTI1A	Q96AJ9	217 aa		13.94	□□□□□ -0.18
RNFT1-208	ENST00000586083	FAM161B	Q96MY7	647 aa		13.94	□□□□□ -0.18
RNFT1-208	ENST00000586083	TOX2	Q96NM4	488 aa		13.94	□□□□□ -0.18
RNFT1-208	ENST00000586083	RNF146	Q9NTX7	359 aa		13.94	□□□□□ -0.18
RNFT1-208	ENST00000586083	SSUH2	Q9Y2M2	353 aa		13.94	□□□□□ -0.18
RNFT1-208	ENST00000586083	LTBP2	Q14767	1821 aa		13.94	□□□□□ -0.18
RNFT1-208	ENST00000586083	MROH7	Q68CQ1	1323 aa		13.94	□□□□□ -0.18
RNFT1-208	ENST00000586083	MYH4	Q9Y623	1939 aa		13.94	□□□□□ -0.18
RNFT1-208	ENST00000586083	RANBP6	O60518	1105 aa	Known RBP	13.93	□□□□□ -0.18
RNFT1-208	ENST00000586083	CST5	P28325	142 aa	Predicted RBP	13.93	□□□□□ -0.18
RNFT1-208	ENST00000586083	FPGS	Q05932	587 aa		13.93	□□□□□ -0.18
RNFT1-208	ENST00000586083	CTDSPL2	Q05D32	466 aa		13.93	□□□□□ -0.18
RNFT1-208	ENST00000586083	MKRN4P	Q13434	485 aa	Predicted RBP	13.93	□□□□□ -0.18
RNFT1-208	ENST00000586083	GNAS	Q5JWF2	1037 aa		13.93	□□□□□ -0.18
RNFT1-208	ENST00000586083	RCSD1	Q6JBY9	416 aa		13.93	□□□□□ -0.18
RNFT1-208	ENST00000586083	ANKRD33	Q7Z3H0	272 aa		13.93	□□□□□ -0.18
RNFT1-208	ENST00000586083	CCDC144CP	Q8IYA2	1237 aa		13.93	□□□□□ -0.18
RNFT1-208	ENST00000586083	KLHDC9	Q8NEP7	349 aa		13.93	□□□□□ -0.18
RNFT1-208	ENST00000586083	RNPC3	Q96LT9	517 aa	Known RBP	13.93	□□□□□ -0.18
RNFT1-208	ENST00000586083	HELLS	Q9NRZ9	838 aa		13.93	□□□□□ -0.18
RNFT1-208	ENST00000586083	TOMM22	Q9NS69	142 aa		13.93	□□□□□ -0.18
RNFT1-208	ENST00000586083	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	13.93	□□□□□ -0.18
RNFT1-208	ENST00000586083	SMCHD1	A6NHR9	2005 aa		13.93	□□□□□ -0.18
RNFT1-208	ENST00000586083	ASB14	A6NK59	587 aa		13.92	□□□□□ -0.18
RNFT1-208	ENST00000586083	PLA2G6	O60733	806 aa		13.92	□□□□□ -0.18
RNFT1-208	ENST00000586083	ALAS1	P13196	640 aa		13.92	□□□□□ -0.18
RNFT1-208	ENST00000586083	SMAD3	P84022	425 aa	Known RBP	13.92	□□□□□ -0.18
RNFT1-208	ENST00000586083	KCTD1	Q719H9	257 aa		13.92	□□□□□ -0.18
RNFT1-208	ENST00000586083	NOL8	Q76FK4	1167 aa	Known RBP	13.92	□□□□□ -0.18
RNFT1-208	ENST00000586083	CHMP4C	Q96CF2	233 aa		13.92	□□□□□ -0.18
RNFT1-208	ENST00000586083	AGBL1	Q96MI9	1066 aa		13.92	□□□□□ -0.18
RNFT1-208	ENST00000586083	GUCD1	Q96NT3	240 aa		13.92	□□□□□ -0.18
RNFT1-208	ENST00000586083	TRERF1	Q96PN7	1200 aa		13.92	□□□□□ -0.18
RNFT1-208	ENST00000586083	ELP1	O95163	1332 aa		13.92	□□□□□ -0.18
RNFT1-208	ENST00000586083	DNAH12	Q6ZR08	3092 aa		13.92	□□□□□ -0.18
RNFT1-208	ENST00000586083	SALL3	Q9BXA9	1300 aa		13.91	□□□□□ -0.18
RNFT1-208	ENST00000586083	ASGR1	P07306	291 aa		13.91	□□□□□ -0.18
RNFT1-208	ENST00000586083	ITGB8	P26012	769 aa		13.91	□□□□□ -0.18
RNFT1-208	ENST00000586083	GJA9	P57773	515 aa		13.91	□□□□□ -0.18
RNFT1-208	ENST00000586083	CNTN2	Q02246	1040 aa		13.91	□□□□□ -0.18
RNFT1-208	ENST00000586083	FAAP100	Q0VG06	881 aa		13.91	□□□□□ -0.18
RNFT1-208	ENST00000586083	CCDC96	Q2M329	555 aa		13.91	□□□□□ -0.18
RNFT1-208	ENST00000586083	CCSAP	Q6IQ19	270 aa	Predicted RBP	13.91	□□□□□ -0.18
RNFT1-208	ENST00000586083	CCDC174	Q6PII3	467 aa		13.91	□□□□□ -0.18
RNFT1-208	ENST00000586083	FGD4	Q96M96	766 aa		13.91	□□□□□ -0.18
RNFT1-208	ENST00000586083	UPF3A	Q9H1J1	476 aa	Known RBP	13.91	□□□□□ -0.18
RNFT1-208	ENST00000586083	A1CF	Q9NQ94	594 aa	Known RBP	13.91	□□□□□ -0.18
RNFT1-208	ENST00000586083	IL17RB	Q9NRM6	502 aa		13.91	□□□□□ -0.18
RNFT1-208	ENST00000586083	ANAPC4	Q9UJX5	808 aa		13.91	□□□□□ -0.18
RNFT1-208	ENST00000586083	MTMR7	Q9Y216	660 aa		13.91	□□□□□ -0.18
RNFT1-208	ENST00000586083		A0A0U1RQG5	324 aa	Predicted RBP	13.9	□□□□□ -0.18
RNFT1-208	ENST00000586083	MYADML2	A6NDP7	307 aa		13.9	□□□□□ -0.18
RNFT1-208	ENST00000586083	FOXP2	O15409	715 aa		13.9	□□□□□ -0.18
RNFT1-208	ENST00000586083	TLR3	O15455	904 aa	Known RBP	13.9	□□□□□ -0.18
RNFT1-208	ENST00000586083	ORC4	O43929	436 aa		13.9	□□□□□ -0.18
RNFT1-208	ENST00000586083	NMT2	O60551	498 aa		13.9	□□□□□ -0.18
RNFT1-208	ENST00000586083	PDE1A	P54750	535 aa		13.9	□□□□□ -0.18
RNFT1-208	ENST00000586083	TNFAIP2	Q03169	654 aa		13.9	□□□□□ -0.18
RNFT1-208	ENST00000586083	VPS53	Q5VIR6	699 aa		13.9	□□□□□ -0.18
RNFT1-208	ENST00000586083	TICAM2	Q86XR7	235 aa		13.9	□□□□□ -0.18
RNFT1-208	ENST00000586083	FAM133A	Q8N9E0	248 aa		13.9	□□□□□ -0.18
RNFT1-208	ENST00000586083	DCAF4	Q8WV16	495 aa		13.9	□□□□□ -0.18
RNFT1-208	ENST00000586083	INCENP	Q9NQS7	918 aa		13.9	□□□□□ -0.18
RNFT1-208	ENST00000586083	CCPG1	Q9ULG6	757 aa		13.9	□□□□□ -0.18
RNFT1-208	ENST00000586083	PRR12	Q9ULL5	1215 aa		13.9	□□□□□ -0.18
RNFT1-208	ENST00000586083	ZNF536	O15090	1300 aa		13.9	□□□□□ -0.18
RNFT1-208	ENST00000586083	TIMP1	P01033	207 aa		13.9	□□□□□ -0.19
RNFT1-208	ENST00000586083	HDAC1	Q13547	482 aa	Predicted RBP	13.9	□□□□□ -0.19
RNFT1-208	ENST00000586083	ALX1	Q15699	326 aa		13.9	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms