RNA–Protein interactions for RNA: ENST00000585956.5

PTBP1-208, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-208ENST00000585956 TMEM63BQ5T3F8 832 aa23.33■■□□□ 1.33
PTBP1-208ENST00000585956 ARMCX2Q7L311 632 aa23.33■■□□□ 1.33
PTBP1-208ENST00000585956 MSL3Q8N5Y2 521 aaKnown RBP23.33■■□□□ 1.33
PTBP1-208ENST00000585956 USP38Q8NB14 1042 aa23.33■■□□□ 1.33
PTBP1-208ENST00000585956 ZBED4O75132 1171 aa23.32■■□□□ 1.32
PTBP1-208ENST00000585956 ASGR1P07306 291 aa23.32■■□□□ 1.32
PTBP1-208ENST00000585956 CDK7P50613 346 aa23.32■■□□□ 1.32
PTBP1-208ENST00000585956 GRIN2CQ14957 1233 aa23.32■■□□□ 1.32
PTBP1-208ENST00000585956 SLFN13Q68D06 897 aa23.32■■□□□ 1.32
PTBP1-208ENST00000585956 ZNF467Q7Z7K2 595 aaPredicted RBP23.32■■□□□ 1.32
PTBP1-208ENST00000585956 CCDC144CPQ8IYA2 1237 aa23.32■■□□□ 1.32
PTBP1-208ENST00000585956 GMCL1P1Q8NEA9 526 aa23.32■■□□□ 1.32
PTBP1-208ENST00000585956 AGBL1Q96MI9 1066 aa23.32■■□□□ 1.32
PTBP1-208ENST00000585956 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.32■■□□□ 1.321e-9■■■□□ 16.1
PTBP1-208ENST00000585956 UPF3AQ9H1J1 476 aaKnown RBP23.32■■□□□ 1.32
PTBP1-208ENST00000585956 PCDHB15Q9Y5E8 787 aa23.32■■□□□ 1.32
PTBP1-208ENST00000585956 TTC28Q96AY4 2481 aa23.32■■□□□ 1.32
PTBP1-208ENST00000585956 SOWAHBA6NEL2 793 aa23.31■■□□□ 1.32
PTBP1-208ENST00000585956 GRXCR1A8MXD5 290 aa23.31■■□□□ 1.32
PTBP1-208ENST00000585956 PATL2C9JE40 543 aaKnown RBP23.31■■□□□ 1.32
PTBP1-208ENST00000585956 NMT2O60551 498 aa23.31■■□□□ 1.32
PTBP1-208ENST00000585956 APPP05067 770 aa23.31■■□□□ 1.32
PTBP1-208ENST00000585956 C6orf222P0C671 652 aaPredicted RBP23.31■■□□□ 1.32
PTBP1-208ENST00000585956 CST5P28325 142 aaPredicted RBP23.31■■□□□ 1.32
PTBP1-208ENST00000585956 CCDC129Q6ZRS4 1044 aa23.31■■□□□ 1.32
PTBP1-208ENST00000585956 ZNF444Q8N0Y2 327 aaPredicted RBP23.31■■□□□ 1.32
PTBP1-208ENST00000585956 ANKRD35Q8N283 1001 aa23.31■■□□□ 1.32
PTBP1-208ENST00000585956 NEDD1Q8NHV4 660 aa23.31■■□□□ 1.32
PTBP1-208ENST00000585956 TOX2Q96NM4 488 aa23.31■■□□□ 1.32
PTBP1-208ENST00000585956 FEM1BQ9UK73 627 aa23.31■■□□□ 1.32
PTBP1-208ENST00000585956 XIRP2A4UGR9 3374 aa23.3■■□□□ 1.32
PTBP1-208ENST00000585956 MOXD2PA6NHM9 499 aa23.3■■□□□ 1.32
PTBP1-208ENST00000585956 TTLL1O95922 423 aa23.3■■□□□ 1.32
PTBP1-208ENST00000585956 TIMP1P01033 207 aa23.3■■□□□ 1.32
PTBP1-208ENST00000585956 PBX2P40425 430 aa23.3■■□□□ 1.32
PTBP1-208ENST00000585956 BEX3Q00994 111 aa23.3■■□□□ 1.32
PTBP1-208ENST00000585956 PURBQ96QR8 312 aaKnown RBP23.3■■□□□ 1.32
PTBP1-208ENST00000585956 CHMP4BQ9H444 224 aaKnown RBP23.3■■□□□ 1.32
PTBP1-208ENST00000585956 TMEM232C9JQI7 657 aa23.29■■□□□ 1.32
PTBP1-208ENST00000585956 BMP3P12645 472 aa23.29■■□□□ 1.32
PTBP1-208ENST00000585956 FOSL2P15408 326 aa23.29■■□□□ 1.32
PTBP1-208ENST00000585956 GJA9P57773 515 aa23.29■■□□□ 1.32
PTBP1-208ENST00000585956 TFAP4Q01664 338 aa23.29■■□□□ 1.32
PTBP1-208ENST00000585956 FAM133AQ8N9E0 248 aa23.29■■□□□ 1.32
PTBP1-208ENST00000585956 A1CFQ9NQ94 594 aaKnown RBP23.29■■□□□ 1.32
PTBP1-208ENST00000585956 DCDC2CA8MYV0 355 aa23.28■■□□□ 1.32
PTBP1-208ENST00000585956 ACRP10323 421 aa23.28■■□□□ 1.32
PTBP1-208ENST00000585956 DNAJB2P25686 324 aa23.28■■□□□ 1.32
PTBP1-208ENST00000585956 CTDSPL2Q05D32 466 aa23.28■■□□□ 1.32
PTBP1-208ENST00000585956 PPARAQ07869 468 aa23.28■■□□□ 1.32
PTBP1-208ENST00000585956 TMEM240Q5SV17 173 aa23.28■■□□□ 1.32
PTBP1-208ENST00000585956 ZMYM1Q5SVZ6 1142 aa23.28■■□□□ 1.32
PTBP1-208ENST00000585956 FAM126BQ8IXS8 530 aa23.28■■□□□ 1.32
PTBP1-208ENST00000585956 NUP133Q8WUM0 1156 aa23.28■■□□□ 1.32
PTBP1-208ENST00000585956 ABHD16BQ9H3Z7 469 aa23.28■■□□□ 1.32
PTBP1-208ENST00000585956 IL17RBQ9NRM6 502 aa23.28■■□□□ 1.32
PTBP1-208ENST00000585956 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.28■■□□□ 1.325e-6■■□□□ 13.5
PTBP1-208ENST00000585956 UMODL1Q5DID0 1318 aa23.28■■□□□ 1.32
PTBP1-208ENST00000585956 ZFYP08048 801 aaPredicted RBP23.27■■□□□ 1.32
PTBP1-208ENST00000585956 TSPY3P0CV98 308 aa23.27■■□□□ 1.32
PTBP1-208ENST00000585956 TSPY8P0CW00 308 aa23.27■■□□□ 1.32
PTBP1-208ENST00000585956 CSF2RAP15509 400 aa23.27■■□□□ 1.32
PTBP1-208ENST00000585956 GNAT2P19087 354 aa23.27■■□□□ 1.32
PTBP1-208ENST00000585956 MCCP23508 829 aa23.27■■□□□ 1.32
PTBP1-208ENST00000585956 MUM1L1Q5H9M0 696 aa23.27■■□□□ 1.32
PTBP1-208ENST00000585956 KCTD1Q719H9 257 aa23.27■■□□□ 1.32
PTBP1-208ENST00000585956 CHST13Q8NET6 341 aa23.27■■□□□ 1.32
PTBP1-208ENST00000585956 PPP1R12CQ9BZL4 782 aa23.27■■□□□ 1.32
PTBP1-208ENST00000585956 PRDM6Q9NQX0 595 aa23.27■■□□□ 1.32
PTBP1-208ENST00000585956 PDGFCQ9NRA1 345 aa23.27■■□□□ 1.32
PTBP1-208ENST00000585956 GRIN2DO15399 1336 aa23.27■■□□□ 1.32
PTBP1-208ENST00000585956 ELP1O95163 1332 aa23.27■■□□□ 1.32
PTBP1-208ENST00000585956 ARVCFO00192 962 aa23.26■■□□□ 1.31
PTBP1-208ENST00000585956 OAZ1P54368 228 aa23.26■■□□□ 1.31
PTBP1-208ENST00000585956 GNASQ5JWF2 1037 aa23.26■■□□□ 1.31
PTBP1-208ENST00000585956 RASIP1Q5U651 963 aa23.26■■□□□ 1.31
PTBP1-208ENST00000585956 VPS53Q5VIR6 699 aa23.26■■□□□ 1.31
PTBP1-208ENST00000585956 MFSD5Q6N075 450 aa23.26■■□□□ 1.31
PTBP1-208ENST00000585956 GLT1D1Q96MS3 346 aa23.26■■□□□ 1.31
PTBP1-208ENST00000585956 RNF146Q9NTX7 359 aa23.26■■□□□ 1.31
PTBP1-208ENST00000585956 CCDC174Q6PII3 467 aa23.25■■□□□ 1.31
PTBP1-208ENST00000585956 GPATCH3Q96I76 525 aa23.25■■□□□ 1.31
PTBP1-208ENST00000585956 ACAD9Q9H845 621 aa23.25■■□□□ 1.31
PTBP1-208ENST00000585956 SYNPO2Q9UMS6 1093 aa23.25■■□□□ 1.31
PTBP1-208ENST00000585956 GNEQ9Y223 722 aaKnown RBP23.25■■□□□ 1.31
PTBP1-208ENST00000585956 CTDP1Q9Y5B0 961 aaPredicted RBP23.25■■□□□ 1.31
PTBP1-208ENST00000585956 GBF1Q92538 1859 aa23.25■■□□□ 1.31
PTBP1-208ENST00000585956 SALL3Q9BXA9 1300 aa23.25■■□□□ 1.31
PTBP1-208ENST00000585956 RBAK-RBAKDNI3L0D1 243 aa23.24■■□□□ 1.31
PTBP1-208ENST00000585956 CD4P01730 458 aa23.24■■□□□ 1.31
PTBP1-208ENST00000585956 SMPD1P17405 629 aa23.24■■□□□ 1.31
PTBP1-208ENST00000585956 CYP2C18P33260 490 aa23.24■■□□□ 1.31
PTBP1-208ENST00000585956 NKX3-2P78367 333 aa23.24■■□□□ 1.31
PTBP1-208ENST00000585956 CXCL17Q6UXB2 119 aa23.24■■□□□ 1.31
PTBP1-208ENST00000585956 STAG1Q8WVM7 1258 aa23.24■■□□□ 1.31
PTBP1-208ENST00000585956 GMCL1Q96IK5 515 aa23.24■■□□□ 1.31
PTBP1-208ENST00000585956 FSD1Q9BTV5 496 aa23.24■■□□□ 1.31
PTBP1-208ENST00000585956 PBX4Q9BYU1 374 aa23.24■■□□□ 1.31
PTBP1-208ENST00000585956 CXXC1Q9P0U4 656 aaPredicted RBP23.24■■□□□ 1.31
PTBP1-208ENST00000585956 FBXO40Q9UH90 709 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms