RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 FLOT1O75955 427 aa14.63□□□□□ -0.07
VMP1-202ENST00000585847 ALDH1A1P00352 501 aa14.63□□□□□ -0.07
VMP1-202ENST00000585847 IFNAR1P17181 557 aa14.63□□□□□ -0.07
VMP1-202ENST00000585847 OSBPP22059 807 aa14.63□□□□□ -0.07
VMP1-202ENST00000585847 SMARCA1P28370 1054 aa14.63□□□□□ -0.07
VMP1-202ENST00000585847 CDC27P30260 824 aa14.63□□□□□ -0.07
VMP1-202ENST00000585847 SLC16A2P36021 539 aa14.63□□□□□ -0.07
VMP1-202ENST00000585847 ST3GAL1Q11201 340 aa14.63□□□□□ -0.07
VMP1-202ENST00000585847 PABPC4Q13310 644 aaKnown RBP eCLIP14.63□□□□□ -0.07
VMP1-202ENST00000585847 RTN1Q16799 776 aa14.63□□□□□ -0.07
VMP1-202ENST00000585847 CCDC96Q2M329 555 aa14.63□□□□□ -0.07
VMP1-202ENST00000585847 ASPRV1Q53RT3 343 aa14.63□□□□□ -0.07
VMP1-202ENST00000585847 NOM1Q5C9Z4 860 aaKnown RBP14.63□□□□□ -0.07
VMP1-202ENST00000585847 C17orf99Q6UX52 265 aa14.63□□□□□ -0.07
VMP1-202ENST00000585847 MICU3Q86XE3 530 aa14.63□□□□□ -0.07
VMP1-202ENST00000585847 CCDC144CPQ8IYA2 1237 aa14.63□□□□□ -0.07
VMP1-202ENST00000585847 NUP133Q8WUM0 1156 aa14.63□□□□□ -0.07
VMP1-202ENST00000585847 UBA5Q9GZZ9 404 aa14.63□□□□□ -0.07
VMP1-202ENST00000585847 BTBD7Q9P203 1132 aa14.63□□□□□ -0.07
VMP1-202ENST00000585847 RBPJLQ9UBG7 517 aa14.63□□□□□ -0.07
VMP1-202ENST00000585847 FEM1BQ9UK73 627 aa14.63□□□□□ -0.07
VMP1-202ENST00000585847 PRR12Q9ULL5 1215 aa14.63□□□□□ -0.07
VMP1-202ENST00000585847 ZSWIM8A7E2V4 1837 aa14.63□□□□□ -0.07
VMP1-202ENST00000585847 MYPNQ86TC9 1320 aa14.63□□□□□ -0.07
VMP1-202ENST00000585847 TLR2O60603 784 aa14.62□□□□□ -0.07
VMP1-202ENST00000585847 PLEKHA8P1O95397 391 aa14.62□□□□□ -0.07
VMP1-202ENST00000585847 PARP1P09874 1014 aaKnown RBP14.62□□□□□ -0.07
VMP1-202ENST00000585847 BCRP11274 1271 aa14.62□□□□□ -0.07
VMP1-202ENST00000585847 IRX3P78415 501 aaPredicted RBP14.62□□□□□ -0.07
VMP1-202ENST00000585847 CAP1Q01518 475 aa14.62□□□□□ -0.07
VMP1-202ENST00000585847 FUT2Q10981 343 aa14.62□□□□□ -0.07
VMP1-202ENST00000585847 CSPP1Q1MSJ5 1256 aa14.62□□□□□ -0.07
VMP1-202ENST00000585847 Q3C1V9 767 aa14.62□□□□□ -0.07
VMP1-202ENST00000585847 GPATCH4Q5T3I0 446 aaKnown RBP14.62□□□□□ -0.07
VMP1-202ENST00000585847 OTUD7BQ6GQQ9 843 aa14.62□□□□□ -0.07
VMP1-202ENST00000585847 DOCK3Q8IZD9 2030 aa14.62□□□□□ -0.07
VMP1-202ENST00000585847 SRBD1Q8N5C6 995 aaKnown RBP14.62□□□□□ -0.07
VMP1-202ENST00000585847 FANCBQ8NB91 859 aa14.62□□□□□ -0.07
VMP1-202ENST00000585847 PARK7Q99497 189 aaKnown RBP14.62□□□□□ -0.07
VMP1-202ENST00000585847 SLF1Q9BQI6 1058 aa14.62□□□□□ -0.07
VMP1-202ENST00000585847 RNF26Q9BY78 433 aaPredicted RBP14.62□□□□□ -0.07
VMP1-202ENST00000585847 PNMA3Q9UL41 463 aa14.62□□□□□ -0.07
VMP1-202ENST00000585847 NAP1L2Q9ULW6 460 aaPredicted RBP14.62□□□□□ -0.07
VMP1-202ENST00000585847 MYH6P13533 1939 aa14.62□□□□□ -0.07
VMP1-202ENST00000585847 ZNF536O15090 1300 aa14.62□□□□□ -0.07
VMP1-202ENST00000585847 KLRF2D3W0D1 207 aa14.61□□□□□ -0.07
VMP1-202ENST00000585847 VWA5AO00534 786 aa14.61□□□□□ -0.07
VMP1-202ENST00000585847 ZSCAN22P10073 491 aaPredicted RBP14.61□□□□□ -0.07
VMP1-202ENST00000585847 XBP1P17861 261 aa14.61□□□□□ -0.07
VMP1-202ENST00000585847 SYT1P21579 422 aa14.61□□□□□ -0.07
VMP1-202ENST00000585847 ADD1P35611 737 aaKnown RBP14.61□□□□□ -0.07
VMP1-202ENST00000585847 STAT2P52630 851 aa14.61□□□□□ -0.07
VMP1-202ENST00000585847 SNAP25P60880 206 aa14.61□□□□□ -0.07
VMP1-202ENST00000585847 SYDE2Q5VT97 1194 aa14.61□□□□□ -0.07
VMP1-202ENST00000585847 ATL3Q6DD88 541 aa14.61□□□□□ -0.07
VMP1-202ENST00000585847 FAM160B2Q86V87 743 aa14.61□□□□□ -0.07
VMP1-202ENST00000585847 NECAB1Q8N987 351 aa14.61□□□□□ -0.07
VMP1-202ENST00000585847 PRPF38AQ8NAV1 312 aaKnown RBP14.61□□□□□ -0.07
VMP1-202ENST00000585847 SPRYD3Q8NCJ5 442 aa14.61□□□□□ -0.07
VMP1-202ENST00000585847 KIFC2Q96AC6 838 aa14.61□□□□□ -0.07
VMP1-202ENST00000585847 MTMR8Q96EF0 704 aa14.61□□□□□ -0.07
VMP1-202ENST00000585847 RANBP17Q9H2T7 1088 aaKnown RBP14.61□□□□□ -0.07
VMP1-202ENST00000585847 ZSCAN16Q9H4T2 348 aaPredicted RBP14.61□□□□□ -0.07
VMP1-202ENST00000585847 RIOX1Q9H6W3 641 aa14.61□□□□□ -0.07
VMP1-202ENST00000585847 ZFYVE28Q9HCC9 887 aa14.61□□□□□ -0.07
VMP1-202ENST00000585847 CPA4Q9UI42 421 aa14.61□□□□□ -0.07
VMP1-202ENST00000585847 MGAMO43451 1857 aa14.61□□□□□ -0.07
VMP1-202ENST00000585847 TAL1P17542 331 aaPredicted RBP14.6□□□□□ -0.07
VMP1-202ENST00000585847 STK3Q13188 491 aa14.6□□□□□ -0.07
VMP1-202ENST00000585847 TMEM132BQ14DG7 1078 aa14.6□□□□□ -0.07
VMP1-202ENST00000585847 NTRK3Q16288 839 aa14.6□□□□□ -0.07
VMP1-202ENST00000585847 LARP1BQ659C4 914 aaKnown RBP14.6□□□□□ -0.07
VMP1-202ENST00000585847 TMTC3Q6ZXV5 915 aa14.6□□□□□ -0.07
VMP1-202ENST00000585847 TEX2Q8IWB9 1127 aa14.6□□□□□ -0.07
VMP1-202ENST00000585847 ADGRF4Q8IZF3 695 aa14.6□□□□□ -0.07
VMP1-202ENST00000585847 CMTR1Q8N1G2 835 aaKnown RBP14.6□□□□□ -0.07
VMP1-202ENST00000585847 CHURC1Q8WUH1 139 aa14.6□□□□□ -0.07
VMP1-202ENST00000585847 JMJD4Q9H9V9 463 aa14.6□□□□□ -0.07
VMP1-202ENST00000585847 SLC38A10Q9HBR0 1119 aa14.6□□□□□ -0.07
VMP1-202ENST00000585847 NCOA5Q9HCD5 579 aaKnown RBP14.6□□□□□ -0.07
VMP1-202ENST00000585847 HOXC10Q9NYD6 342 aa14.6□□□□□ -0.07
VMP1-202ENST00000585847 MORF4L1Q9UBU8 362 aa14.6□□□□□ -0.07
VMP1-202ENST00000585847 ZNF214Q9UL59 606 aaPredicted RBP14.6□□□□□ -0.07
VMP1-202ENST00000585847 H3BQV1 296 aa14.59□□□□□ -0.07
VMP1-202ENST00000585847 hCG_1984214I3L0E3 225 aa14.59□□□□□ -0.07
VMP1-202ENST00000585847 DEXIO95424 95 aa14.59□□□□□ -0.07
VMP1-202ENST00000585847 CTGFP29279 349 aa14.59□□□□□ -0.07
VMP1-202ENST00000585847 CCT2P78371 535 aaKnown RBP14.59□□□□□ -0.07
VMP1-202ENST00000585847 AKAP17AQ02040 695 aaKnown RBP14.59□□□□□ -0.07
VMP1-202ENST00000585847 SAMD1Q6SPF0 538 aaPredicted RBP14.59□□□□□ -0.07
VMP1-202ENST00000585847 ANKRD13CQ8N6S4 541 aa14.59□□□□□ -0.07
VMP1-202ENST00000585847 ZNF713Q8N859 430 aaPredicted RBP14.59□□□□□ -0.07
VMP1-202ENST00000585847 CNTNAP5Q8WYK1 1306 aa14.59□□□□□ -0.07
VMP1-202ENST00000585847 PLXNB2O15031 1838 aa14.58□□□□□ -0.08
VMP1-202ENST00000585847 PPP1R11O60927 126 aaPredicted RBP14.58□□□□□ -0.08
VMP1-202ENST00000585847 DTNBO60941 627 aa14.58□□□□□ -0.08
VMP1-202ENST00000585847 FMNL1O95466 1100 aaPredicted RBP14.58□□□□□ -0.08
VMP1-202ENST00000585847 GCLCP48506 637 aaPredicted RBP14.58□□□□□ -0.08
VMP1-202ENST00000585847 ERVK-9P63128 1117 aa14.58□□□□□ -0.08
VMP1-202ENST00000585847 ERVK-24P63145 666 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms