RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 MTMR7Q9Y216 660 aa16.12■□□□□ 0.17
PRKCSH-202ENST00000585540 RPTORQ8N122 1335 aa16.12■□□□□ 0.17
PRKCSH-202ENST00000585540 PRC1O43663 620 aa16.11■□□□□ 0.17
PRKCSH-202ENST00000585540 MSCO60682 206 aa16.11■□□□□ 0.17
PRKCSH-202ENST00000585540 ECM2O94769 699 aaPredicted RBP16.11■□□□□ 0.17
PRKCSH-202ENST00000585540 GJB1P08034 283 aa16.11■□□□□ 0.17
PRKCSH-202ENST00000585540 SMARCA1P28370 1054 aa16.11■□□□□ 0.17
PRKCSH-202ENST00000585540 KIF5BP33176 963 aa16.11■□□□□ 0.17
PRKCSH-202ENST00000585540 RCAN1P53805 252 aa16.11■□□□□ 0.17
PRKCSH-202ENST00000585540 ANTXR2P58335 489 aa16.11■□□□□ 0.17
PRKCSH-202ENST00000585540 MAP3K21Q5TCX8 1036 aa16.11■□□□□ 0.17
PRKCSH-202ENST00000585540 DHX32Q7L7V1 743 aaKnown RBP16.11■□□□□ 0.17
PRKCSH-202ENST00000585540 SGMS1Q86VZ5 419 aa16.11■□□□□ 0.17
PRKCSH-202ENST00000585540 TRIB2Q92519 343 aa16.11■□□□□ 0.17
PRKCSH-202ENST00000585540 LZTS2Q9BRK4 669 aa16.11■□□□□ 0.17
PRKCSH-202ENST00000585540 RAVER2Q9HCJ3 691 aaKnown RBP16.11■□□□□ 0.17
PRKCSH-202ENST00000585540 HMX1Q9NP08 348 aaPredicted RBP16.11■□□□□ 0.17
PRKCSH-202ENST00000585540 ZNF536O15090 1300 aa16.11■□□□□ 0.17
PRKCSH-202ENST00000585540 FRMPD2Q68DX3 1309 aaPredicted RBP16.11■□□□□ 0.17
PRKCSH-202ENST00000585540 CCDC69A6NI79 296 aa16.1■□□□□ 0.17
PRKCSH-202ENST00000585540 SH2B2O14492 632 aaPredicted RBP16.1■□□□□ 0.17
PRKCSH-202ENST00000585540 PEX10O60683 326 aa16.1■□□□□ 0.17
PRKCSH-202ENST00000585540 TROAPQ12815 778 aa16.1■□□□□ 0.17
PRKCSH-202ENST00000585540 GRM4Q14833 912 aa16.1■□□□□ 0.17
PRKCSH-202ENST00000585540 FBXL16Q8N461 479 aa16.1■□□□□ 0.17
PRKCSH-202ENST00000585540 SAMD3Q8N6K7 520 aa16.1■□□□□ 0.17
PRKCSH-202ENST00000585540 CTCFLQ8NI51 663 aaPredicted RBP16.1■□□□□ 0.17
PRKCSH-202ENST00000585540 DDX11Q96FC9 970 aa16.1■□□□□ 0.17
PRKCSH-202ENST00000585540 LY9Q9HBG7 655 aa16.1■□□□□ 0.17
PRKCSH-202ENST00000585540 GPCPD1Q9NPB8 672 aa16.1■□□□□ 0.17
PRKCSH-202ENST00000585540 PAK6Q9NQU5 681 aaPredicted RBP16.1■□□□□ 0.17
PRKCSH-202ENST00000585540 RNF146Q9NTX7 359 aa16.1■□□□□ 0.17
PRKCSH-202ENST00000585540 CCPG1Q9ULG6 757 aa16.1■□□□□ 0.17
PRKCSH-202ENST00000585540 PALM3A6NDB9 673 aaPredicted RBP16.09■□□□□ 0.17
PRKCSH-202ENST00000585540 IGHA2P01877 340 aa16.09■□□□□ 0.17
PRKCSH-202ENST00000585540 CCL5P13501 91 aa16.09■□□□□ 0.17
PRKCSH-202ENST00000585540 ELNP15502 786 aa16.09■□□□□ 0.17
PRKCSH-202ENST00000585540 GJA8P48165 433 aa16.09■□□□□ 0.17
PRKCSH-202ENST00000585540 SYNE3Q6ZMZ3 975 aa16.09■□□□□ 0.17
PRKCSH-202ENST00000585540 ANKRD35Q8N283 1001 aa16.09■□□□□ 0.17
PRKCSH-202ENST00000585540 RNF208Q9H0X6 261 aa16.09■□□□□ 0.17
PRKCSH-202ENST00000585540 ZNFX1Q9P2E3 1918 aaKnown RBP16.09■□□□□ 0.17
PRKCSH-202ENST00000585540 PLXNA1Q9UIW2 1896 aa16.08■□□□□ 0.17
PRKCSH-202ENST00000585540 DNAJC25-GNG10A0A024R161 153 aa16.08■□□□□ 0.16
PRKCSH-202ENST00000585540 PPP2R5BQ15173 497 aa16.08■□□□□ 0.16
PRKCSH-202ENST00000585540 ZNF792Q3KQV3 632 aa16.08■□□□□ 0.16
PRKCSH-202ENST00000585540 TTBK2Q6IQ55 1244 aa16.08■□□□□ 0.16
PRKCSH-202ENST00000585540 ZNF654Q8IZM8 581 aa16.08■□□□□ 0.16
PRKCSH-202ENST00000585540 ANKLE1Q8NAG6 615 aa16.08■□□□□ 0.16
PRKCSH-202ENST00000585540 RGS22Q8NE09 1264 aa16.08■□□□□ 0.16
PRKCSH-202ENST00000585540 MAML3Q96JK9 1138 aa16.08■□□□□ 0.16
PRKCSH-202ENST00000585540 TRERF1Q96PN7 1200 aa16.08■□□□□ 0.16
PRKCSH-202ENST00000585540 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.08■□□□□ 0.163e-6■■■■□ 19.8
PRKCSH-202ENST00000585540 RIPK3Q9Y572 518 aa16.08■□□□□ 0.16
PRKCSH-202ENST00000585540 ABCB11O95342 1321 aa16.08■□□□□ 0.16
PRKCSH-202ENST00000585540 SYNGAP1Q96PV0 1343 aa16.08■□□□□ 0.16
PRKCSH-202ENST00000585540 KLRF2D3W0D1 207 aa16.07■□□□□ 0.16
PRKCSH-202ENST00000585540 ALAS1P13196 640 aa16.07■□□□□ 0.16
PRKCSH-202ENST00000585540 PRKAR2AP13861 404 aaKnown RBP16.07■□□□□ 0.16
PRKCSH-202ENST00000585540 SLC16A2P36021 539 aa16.07■□□□□ 0.16
PRKCSH-202ENST00000585540 ANAPC15P60006 121 aa16.07■□□□□ 0.16
PRKCSH-202ENST00000585540 CDC37Q16543 378 aaPredicted RBP16.07■□□□□ 0.16
PRKCSH-202ENST00000585540 C8orf34Q49A92 452 aa16.07■□□□□ 0.16
PRKCSH-202ENST00000585540 CCDC174Q6PII3 467 aa16.07■□□□□ 0.16
PRKCSH-202ENST00000585540 BLOC1S2Q6QNY1 142 aa16.07■□□□□ 0.16
PRKCSH-202ENST00000585540 MAMDC4Q6UXC1 1216 aa16.07■□□□□ 0.16
PRKCSH-202ENST00000585540 NFXL1Q6ZNB6 911 aa16.07■□□□□ 0.16
PRKCSH-202ENST00000585540 RASGRP2Q7LDG7 609 aa16.07■□□□□ 0.16
PRKCSH-202ENST00000585540 NPLOC4Q8TAT6 608 aa16.07■□□□□ 0.16
PRKCSH-202ENST00000585540 MTMR8Q96EF0 704 aa16.07■□□□□ 0.16
PRKCSH-202ENST00000585540 MPHOSPH6Q99547 160 aaKnown RBP16.07■□□□□ 0.16
PRKCSH-202ENST00000585540 TM6SF1Q9BZW5 370 aa16.07■□□□□ 0.16
PRKCSH-202ENST00000585540 RBM28Q9NW13 759 aaKnown RBP16.07■□□□□ 0.16
PRKCSH-202ENST00000585540 MAP3K20Q9NYL2 800 aaKnown RBP16.07■□□□□ 0.16
PRKCSH-202ENST00000585540 MAD2L2Q9UI95 211 aa16.07■□□□□ 0.16
PRKCSH-202ENST00000585540 SLC12A7Q9Y666 1083 aa16.07■□□□□ 0.16
PRKCSH-202ENST00000585540 KIAA0100Q14667 2235 aaKnown RBP16.07■□□□□ 0.16
PRKCSH-202ENST00000585540 DHX16O60231 1041 aaKnown RBP16.06■□□□□ 0.16
PRKCSH-202ENST00000585540 COBLO75128 1261 aa16.06■□□□□ 0.16
PRKCSH-202ENST00000585540 EXOSC10Q01780 885 aaKnown RBP16.06■□□□□ 0.16
PRKCSH-202ENST00000585540 MTFR1Q15390 333 aa16.06■□□□□ 0.16
PRKCSH-202ENST00000585540 MCF2L2Q86YR7 1114 aa16.06■□□□□ 0.16
PRKCSH-202ENST00000585540 RASEFQ8IZ41 740 aa16.06■□□□□ 0.16
PRKCSH-202ENST00000585540 ADGRF4Q8IZF3 695 aa16.06■□□□□ 0.16
PRKCSH-202ENST00000585540 AGBL1Q96MI9 1066 aa16.06■□□□□ 0.16
PRKCSH-202ENST00000585540 SPZ1Q9BXG8 430 aa16.06■□□□□ 0.16
PRKCSH-202ENST00000585540 USP26Q9BXU7 913 aa16.06■□□□□ 0.16
PRKCSH-202ENST00000585540 RIOX1Q9H6W3 641 aa16.06■□□□□ 0.16
PRKCSH-202ENST00000585540 A1CFQ9NQ94 594 aaKnown RBP16.06■□□□□ 0.16
PRKCSH-202ENST00000585540 ADD3Q9UEY8 706 aaKnown RBP16.06■□□□□ 0.16
PRKCSH-202ENST00000585540 MRPL11Q9Y3B7 192 aaKnown RBP16.06■□□□□ 0.16
PRKCSH-202ENST00000585540 SNX14Q9Y5W7 946 aa16.06■□□□□ 0.16
PRKCSH-202ENST00000585540 MYH6P13533 1939 aa16.06■□□□□ 0.16
PRKCSH-202ENST00000585540 ASB14A6NK59 587 aa16.05■□□□□ 0.16
PRKCSH-202ENST00000585540 B4DLN1 442 aa16.05■□□□□ 0.16
PRKCSH-202ENST00000585540 POTEB2H3BUK9 544 aa16.05■□□□□ 0.16
PRKCSH-202ENST00000585540 ZBTB5O15062 677 aa16.05■□□□□ 0.16
PRKCSH-202ENST00000585540 SGPL1O95470 568 aa16.05■□□□□ 0.16
PRKCSH-202ENST00000585540 GOLGA8HP0CJ92 632 aa16.05■□□□□ 0.16
PRKCSH-202ENST00000585540 MRPL12P52815 198 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms