RNA–Protein interactions for RNA: ENST00000585466.1

CLIP3-202, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 2

Gene CLIP3, Length 368 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-202ENST00000585466 SLC16A2P36021 539 aa17.85■□□□□ 0.45
CLIP3-202ENST00000585466 ZNF543Q08ER8 600 aa17.85■□□□□ 0.45
CLIP3-202ENST00000585466 CCDC96Q2M329 555 aa17.85■□□□□ 0.45
CLIP3-202ENST00000585466 FRMPD2Q68DX3 1309 aaPredicted RBP17.85■□□□□ 0.45
CLIP3-202ENST00000585466 MAMDC4Q6UXC1 1216 aa17.85■□□□□ 0.45
CLIP3-202ENST00000585466 TRIOBPQ9H2D6 2365 aa17.85■□□□□ 0.45
CLIP3-202ENST00000585466 ASTN1O14525 1302 aa17.84■□□□□ 0.45
CLIP3-202ENST00000585466 MSCO60682 206 aa17.84■□□□□ 0.45
CLIP3-202ENST00000585466 SNAI1O95863 264 aaPredicted RBP17.84■□□□□ 0.45
CLIP3-202ENST00000585466 MUM1L1Q5H9M0 696 aa17.84■□□□□ 0.45
CLIP3-202ENST00000585466 STOX1Q6ZVD7 989 aa17.84■□□□□ 0.45
CLIP3-202ENST00000585466 FAM133AQ8N9E0 248 aa17.84■□□□□ 0.45
CLIP3-202ENST00000585466 RUFY2Q8WXA3 655 aa17.84■□□□□ 0.45
CLIP3-202ENST00000585466 ZSCAN10Q96SZ4 725 aaPredicted RBP17.84■□□□□ 0.45
CLIP3-202ENST00000585466 C11orf49Q9H6J7 331 aa17.84■□□□□ 0.45
CLIP3-202ENST00000585466 GPCPD1Q9NPB8 672 aa17.84■□□□□ 0.45
CLIP3-202ENST00000585466 A1CFQ9NQ94 594 aaKnown RBP17.84■□□□□ 0.45
CLIP3-202ENST00000585466 HOMER2Q9NSB8 354 aa17.84■□□□□ 0.45
CLIP3-202ENST00000585466 RNF146Q9NTX7 359 aa17.84■□□□□ 0.45
CLIP3-202ENST00000585466 FBXO40Q9UH90 709 aa17.84■□□□□ 0.45
CLIP3-202ENST00000585466 NRBP1Q9UHY1 535 aa17.84■□□□□ 0.45
CLIP3-202ENST00000585466 ISY1Q9ULR0 285 aaKnown RBP17.84■□□□□ 0.45
CLIP3-202ENST00000585466 CNGA1P29973 690 aa17.83■□□□□ 0.44
CLIP3-202ENST00000585466 SLC4A3P48751 1232 aa17.83■□□□□ 0.44
CLIP3-202ENST00000585466 IKQ13123 557 aaPredicted RBP17.83■□□□□ 0.44
CLIP3-202ENST00000585466 SEC23AQ15436 765 aa17.83■□□□□ 0.44
CLIP3-202ENST00000585466 SYDE2Q5VT97 1194 aa17.83■□□□□ 0.44
CLIP3-202ENST00000585466 CCDC174Q6PII3 467 aa17.83■□□□□ 0.44
CLIP3-202ENST00000585466 CYB5R4Q7L1T6 521 aa17.83■□□□□ 0.44
CLIP3-202ENST00000585466 ZNF467Q7Z7K2 595 aaPredicted RBP17.83■□□□□ 0.44
CLIP3-202ENST00000585466 MSL3Q8N5Y2 521 aaKnown RBP17.83■□□□□ 0.44
CLIP3-202ENST00000585466 DPF3Q92784 378 aa17.83■□□□□ 0.44
CLIP3-202ENST00000585466 MAP4K1Q92918 833 aa17.83■□□□□ 0.44
CLIP3-202ENST00000585466 ACAD9Q9H845 621 aa17.83■□□□□ 0.44
CLIP3-202ENST00000585466 TNKSO95271 1327 aa17.82■□□□□ 0.44
CLIP3-202ENST00000585466 SYNGAP1Q96PV0 1343 aa17.82■□□□□ 0.44
CLIP3-202ENST00000585466 ICAM1P05362 532 aa17.82■□□□□ 0.44
CLIP3-202ENST00000585466 CNTN2Q02246 1040 aa17.82■□□□□ 0.44
CLIP3-202ENST00000585466 TKFCQ3LXA3 575 aa17.82■□□□□ 0.44
CLIP3-202ENST00000585466 ANO1Q5XXA6 986 aa17.82■□□□□ 0.44
CLIP3-202ENST00000585466 PNMA1Q8ND90 353 aa17.82■□□□□ 0.44
CLIP3-202ENST00000585466 TRERF1Q96PN7 1200 aa17.82■□□□□ 0.44
CLIP3-202ENST00000585466 KRT23Q9C075 422 aa17.82■□□□□ 0.44
CLIP3-202ENST00000585466 KATNBL1Q9H079 304 aa17.82■□□□□ 0.44
CLIP3-202ENST00000585466 PRO3102Q9H379 93 aa17.82■□□□□ 0.44
CLIP3-202ENST00000585466 CTDP1Q9Y5B0 961 aaPredicted RBP17.82■□□□□ 0.44
CLIP3-202ENST00000585466 SOWAHBA6NEL2 793 aa17.81■□□□□ 0.44
CLIP3-202ENST00000585466 BMP2KLQ5H9B9 411 aa17.81■□□□□ 0.44
CLIP3-202ENST00000585466 IQCA1Q86XH1 822 aa17.81■□□□□ 0.44
CLIP3-202ENST00000585466 DDX11Q96FC9 970 aa17.81■□□□□ 0.44
CLIP3-202ENST00000585466 LSG1Q9H089 658 aaKnown RBP17.81■□□□□ 0.44
CLIP3-202ENST00000585466 CPVLQ9H3G5 476 aa17.81■□□□□ 0.44
CLIP3-202ENST00000585466 CNNM2Q9H8M5 875 aa17.81■□□□□ 0.44
CLIP3-202ENST00000585466 U3KPZ7 1027 aaPredicted RBP17.81■□□□□ 0.44
CLIP3-202ENST00000585466 DNAH12Q6ZR08 3092 aa17.81■□□□□ 0.44
CLIP3-202ENST00000585466 DNM1LO00429 736 aa17.8■□□□□ 0.44
CLIP3-202ENST00000585466 ADCY6O43306 1168 aa17.8■□□□□ 0.44
CLIP3-202ENST00000585466 GOLGA8HP0CJ92 632 aa17.8■□□□□ 0.44
CLIP3-202ENST00000585466 ALAS1P13196 640 aa17.8■□□□□ 0.44
CLIP3-202ENST00000585466 COL9A3Q14050 684 aaPredicted RBP17.8■□□□□ 0.44
CLIP3-202ENST00000585466 LRRC26Q2I0M4 334 aa17.8■□□□□ 0.44
CLIP3-202ENST00000585466 CCDC178Q5BJE1 867 aa17.8■□□□□ 0.44
CLIP3-202ENST00000585466 ANKRD35Q8N283 1001 aa17.8■□□□□ 0.44
CLIP3-202ENST00000585466 LENG1Q96BZ8 264 aaPredicted RBP17.8■□□□□ 0.44
CLIP3-202ENST00000585466 ESYT1Q9BSJ8 1104 aa17.8■□□□□ 0.44
CLIP3-202ENST00000585466 CYP39A1Q9NYL5 469 aa17.8■□□□□ 0.44
CLIP3-202ENST00000585466 CCPG1Q9ULG6 757 aa17.8■□□□□ 0.44
CLIP3-202ENST00000585466 COLQQ9Y215 455 aaPredicted RBP17.8■□□□□ 0.44
CLIP3-202ENST00000585466 E7EWF7 191 aa17.79■□□□□ 0.44
CLIP3-202ENST00000585466 EVI5O60447 810 aa17.79■□□□□ 0.44
CLIP3-202ENST00000585466 ANTXR2P58335 489 aa17.79■□□□□ 0.44
CLIP3-202ENST00000585466 GPATCH4Q5T3I0 446 aaKnown RBP17.79■□□□□ 0.44
CLIP3-202ENST00000585466 GJC2Q5T442 439 aaPredicted RBP17.79■□□□□ 0.44
CLIP3-202ENST00000585466 CLEC4DQ8WXI8 215 aa17.79■□□□□ 0.44
CLIP3-202ENST00000585466 SENP2Q9HC62 589 aa17.79■□□□□ 0.44
CLIP3-202ENST00000585466 RBM8AQ9Y5S9 174 aaKnown RBP17.79■□□□□ 0.44
CLIP3-202ENST00000585466 DDX49Q9Y6V7 483 aaKnown RBP17.79■□□□□ 0.44
CLIP3-202ENST00000585466 MYH6P13533 1939 aa17.78■□□□□ 0.44
CLIP3-202ENST00000585466 WDR19Q8NEZ3 1342 aa17.78■□□□□ 0.44
CLIP3-202ENST00000585466 NFIBO00712 420 aa17.78■□□□□ 0.44
CLIP3-202ENST00000585466 LRRC41Q15345 812 aa17.78■□□□□ 0.44
CLIP3-202ENST00000585466 SLC35G1Q2M3R5 365 aa17.78■□□□□ 0.44
CLIP3-202ENST00000585466 ARMCX2Q7L311 632 aa17.78■□□□□ 0.44
CLIP3-202ENST00000585466 PURBQ96QR8 312 aaKnown RBP17.78■□□□□ 0.44
CLIP3-202ENST00000585466 KAT14Q9H8E8 782 aa17.78■□□□□ 0.44
CLIP3-202ENST00000585466 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.78■□□□□ 0.44
CLIP3-202ENST00000585466 NR2E3Q9Y5X4 410 aa17.78■□□□□ 0.44
CLIP3-202ENST00000585466 POTEB2H3BUK9 544 aa17.77■□□□□ 0.44
CLIP3-202ENST00000585466 ADAMTS4O75173 837 aa17.77■□□□□ 0.44
CLIP3-202ENST00000585466 HABP4Q5JVS0 413 aaKnown RBP17.77■□□□□ 0.44
CLIP3-202ENST00000585466 CCDC144CPQ8IYA2 1237 aa17.77■□□□□ 0.44
CLIP3-202ENST00000585466 MB21D2Q8IYB1 491 aaPredicted RBP17.77■□□□□ 0.44
CLIP3-202ENST00000585466 C7orf61Q8IZ16 206 aa17.77■□□□□ 0.44
CLIP3-202ENST00000585466 UBA5Q9GZZ9 404 aa17.77■□□□□ 0.44
CLIP3-202ENST00000585466 PCDH10Q9P2E7 1040 aa17.77■□□□□ 0.44
CLIP3-202ENST00000585466 CNPY2Q9Y2B0 182 aa17.77■□□□□ 0.44
CLIP3-202ENST00000585466 AKR1A1P14550 325 aa17.76■□□□□ 0.43
CLIP3-202ENST00000585466 ASPRV1Q53RT3 343 aa17.76■□□□□ 0.43
CLIP3-202ENST00000585466 STAG2Q8N3U4 1231 aa17.76■□□□□ 0.43
CLIP3-202ENST00000585466 ARRDC4Q8NCT1 418 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms