RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 MCM5P33992 734 aa27.04■■□□□ 1.92
LSM7-202ENST00000585395 MFSD14CQ5VZR4 134 aa27.04■■□□□ 1.92
LSM7-202ENST00000585395 USP6NLQ92738 828 aa27.04■■□□□ 1.92
LSM7-202ENST00000585395 KAT14Q9H8E8 782 aa27.04■■□□□ 1.92
LSM7-202ENST00000585395 TNKSO95271 1327 aa27.04■■□□□ 1.92
LSM7-202ENST00000585395 FCER1AP12319 257 aa27.03■■□□□ 1.92
LSM7-202ENST00000585395 PRKAR2AP13861 404 aaKnown RBP27.03■■□□□ 1.92
LSM7-202ENST00000585395 ADORA2AP29274 412 aa27.03■■□□□ 1.92
LSM7-202ENST00000585395 STAT2P52630 851 aa27.03■■□□□ 1.92
LSM7-202ENST00000585395 TRIM32Q13049 653 aa27.03■■□□□ 1.92
LSM7-202ENST00000585395 CCL14Q16627 93 aa27.03■■□□□ 1.92
LSM7-202ENST00000585395 STOX1Q6ZVD7 989 aa27.03■■□□□ 1.92
LSM7-202ENST00000585395 RIOX2Q8IUF8 465 aa27.03■■□□□ 1.92
LSM7-202ENST00000585395 CPXCR1Q8N123 301 aa27.03■■□□□ 1.92
LSM7-202ENST00000585395 CHURC1Q8WUH1 139 aa27.03■■□□□ 1.92
LSM7-202ENST00000585395 ANKS1AQ92625 1134 aa27.03■■□□□ 1.92
LSM7-202ENST00000585395 GMCL1Q96IK5 515 aa27.03■■□□□ 1.92
LSM7-202ENST00000585395 NEK1Q96PY6 1258 aa27.03■■□□□ 1.92
LSM7-202ENST00000585395 TMEM47Q9BQJ4 181 aa27.03■■□□□ 1.92
LSM7-202ENST00000585395 ZKSCAN3Q9BRR0 538 aa27.03■■□□□ 1.92
LSM7-202ENST00000585395 OGDHLQ9ULD0 1010 aa27.03■■□□□ 1.92
LSM7-202ENST00000585395 ADAMTS5Q9UNA0 930 aa27.03■■□□□ 1.92
LSM7-202ENST00000585395 IFIT3O14879 490 aaKnown RBP27.02■■□□□ 1.92
LSM7-202ENST00000585395 IFIT1BQ5T764 474 aaKnown RBP27.02■■□□□ 1.92
LSM7-202ENST00000585395 SNRNP48Q6IEG0 339 aaKnown RBP27.02■■□□□ 1.92
LSM7-202ENST00000585395 FAM160B2Q86V87 743 aa27.02■■□□□ 1.92
LSM7-202ENST00000585395 MB21D2Q8IYB1 491 aaPredicted RBP27.02■■□□□ 1.92
LSM7-202ENST00000585395 MMP19Q99542 508 aa27.02■■□□□ 1.92
LSM7-202ENST00000585395 TEX13BQ9BXU2 312 aa27.02■■□□□ 1.92
LSM7-202ENST00000585395 USP26Q9BXU7 913 aa27.02■■□□□ 1.92
LSM7-202ENST00000585395 PSMA5P28066 241 aa27.01■■□□□ 1.91
LSM7-202ENST00000585395 KCTD2Q14681 263 aa27.01■■□□□ 1.91
LSM7-202ENST00000585395 KCTD1Q719H9 257 aa27.01■■□□□ 1.91
LSM7-202ENST00000585395 DCAF4Q8WV16 495 aa27.01■■□□□ 1.91
LSM7-202ENST00000585395 KCNB2Q92953 911 aa27.01■■□□□ 1.91
LSM7-202ENST00000585395 TMEM87BQ96K49 555 aa27.01■■□□□ 1.91
LSM7-202ENST00000585395 ZNF236Q9UL36 1845 aa27■■□□□ 1.91
LSM7-202ENST00000585395 WTAPQ15007 396 aa27■■□□□ 1.91
LSM7-202ENST00000585395 CYB5R4Q7L1T6 521 aa27■■□□□ 1.91
LSM7-202ENST00000585395 PHF6Q8IWS0 365 aaKnown RBP eCLIP27■■□□□ 1.91
LSM7-202ENST00000585395 TMTC2Q8N394 836 aa27■■□□□ 1.91
LSM7-202ENST00000585395 ENAHQ8N8S7 591 aaPredicted RBP27■■□□□ 1.91
LSM7-202ENST00000585395 TAF6LQ9Y6J9 622 aa27■■□□□ 1.91
LSM7-202ENST00000585395 WDR19Q8NEZ3 1342 aa26.99■■□□□ 1.91
LSM7-202ENST00000585395 RCSD1Q6JBY9 416 aa26.99■■□□□ 1.91
LSM7-202ENST00000585395 NPLOC4Q8TAT6 608 aa26.99■■□□□ 1.91
LSM7-202ENST00000585395 RAVER2Q9HCJ3 691 aaKnown RBP26.99■■□□□ 1.91
LSM7-202ENST00000585395 ZNF214Q9UL59 606 aaPredicted RBP26.99■■□□□ 1.91
LSM7-202ENST00000585395 ZNFX1Q9P2E3 1918 aaKnown RBP26.98■■□□□ 1.91
LSM7-202ENST00000585395 PRC1O43663 620 aa26.98■■□□□ 1.91
LSM7-202ENST00000585395 HOXC6P09630 235 aa26.98■■□□□ 1.91
LSM7-202ENST00000585395 FDX1P10109 184 aa26.98■■□□□ 1.91
LSM7-202ENST00000585395 CACNB2Q08289 660 aaPredicted RBP26.98■■□□□ 1.91
LSM7-202ENST00000585395 TMEM67Q5HYA8 995 aa26.98■■□□□ 1.91
LSM7-202ENST00000585395 ABRAQ8N0Z2 381 aa26.98■■□□□ 1.91
LSM7-202ENST00000585395 PNMA1Q8ND90 353 aa26.98■■□□□ 1.91
LSM7-202ENST00000585395 REPS2Q8NFH8 660 aa26.98■■□□□ 1.91
LSM7-202ENST00000585395 LAMA2P24043 3122 aaKnown RBP26.97■■□□□ 1.91
LSM7-202ENST00000585395 RASEFQ8IZ41 740 aa26.97■■□□□ 1.91
LSM7-202ENST00000585395 SNX14Q9Y5W7 946 aa26.97■■□□□ 1.91
LSM7-202ENST00000585395 CNGA1P29973 690 aa26.96■■□□□ 1.91
LSM7-202ENST00000585395 SEC23AQ15436 765 aa26.96■■□□□ 1.91
LSM7-202ENST00000585395 MAP3K21Q5TCX8 1036 aa26.96■■□□□ 1.91
LSM7-202ENST00000585395 FAM109BQ6ICB4 259 aaPredicted RBP26.96■■□□□ 1.91
LSM7-202ENST00000585395 BLOC1S2Q6QNY1 142 aa26.96■■□□□ 1.91
LSM7-202ENST00000585395 DHX32Q7L7V1 743 aaKnown RBP26.96■■□□□ 1.91
LSM7-202ENST00000585395 SLC38A10Q9HBR0 1119 aa26.96■■□□□ 1.91
LSM7-202ENST00000585395 PFASO15067 1338 aa26.95■■□□□ 1.91
LSM7-202ENST00000585395 GPATCH4Q5T3I0 446 aaKnown RBP26.95■■□□□ 1.9
LSM7-202ENST00000585395 DDX11Q96FC9 970 aa26.95■■□□□ 1.9
LSM7-202ENST00000585395 JAKMIP1Q96N16 626 aaKnown RBP26.95■■□□□ 1.9
LSM7-202ENST00000585395 UPF2Q9HAU5 1272 aaKnown RBP26.95■■□□□ 1.9
LSM7-202ENST00000585395 FLRT1Q9NZU1 646 aa26.95■■□□□ 1.9
LSM7-202ENST00000585395 FRMPD2Q68DX3 1309 aaPredicted RBP26.94■■□□□ 1.9
LSM7-202ENST00000585395 PLA2G6O60733 806 aa26.94■■□□□ 1.9
LSM7-202ENST00000585395 COBLO75128 1261 aa26.94■■□□□ 1.9
LSM7-202ENST00000585395 CCND3P30281 292 aaPredicted RBP26.94■■□□□ 1.9
LSM7-202ENST00000585395 CYP2C19P33261 490 aa26.94■■□□□ 1.9
LSM7-202ENST00000585395 OAZ1P54368 228 aa26.94■■□□□ 1.9
LSM7-202ENST00000585395 ANAPC15P60006 121 aa26.94■■□□□ 1.9
LSM7-202ENST00000585395 FGD1P98174 961 aa26.94■■□□□ 1.9
LSM7-202ENST00000585395 C8orf34Q49A92 452 aa26.94■■□□□ 1.9
LSM7-202ENST00000585395 RASGRP2Q7LDG7 609 aa26.94■■□□□ 1.9
LSM7-202ENST00000585395 CHST3Q7LGC8 479 aa26.94■■□□□ 1.9
LSM7-202ENST00000585395 CATIPQ7Z7H3 387 aa26.94■■□□□ 1.9
LSM7-202ENST00000585395 GPCPD1Q9NPB8 672 aa26.94■■□□□ 1.9
LSM7-202ENST00000585395 HOMER2Q9NSB8 354 aa26.94■■□□□ 1.9
LSM7-202ENST00000585395 FBXO40Q9UH90 709 aa26.94■■□□□ 1.9
LSM7-202ENST00000585395 PLXNA1Q9UIW2 1896 aa26.93■■□□□ 1.9
LSM7-202ENST00000585395 POTEB2H3BUK9 544 aa26.93■■□□□ 1.9
LSM7-202ENST00000585395 ATP2A1O14983 1001 aa26.93■■□□□ 1.9
LSM7-202ENST00000585395 COL6A1P12109 1028 aa26.93■■□□□ 1.9
LSM7-202ENST00000585395 ANTXR2P58335 489 aa26.93■■□□□ 1.9
LSM7-202ENST00000585395 OLFML2BQ68BL8 750 aa26.93■■□□□ 1.9
LSM7-202ENST00000585395 CCDC174Q6PII3 467 aa26.93■■□□□ 1.9
LSM7-202ENST00000585395 NFXL1Q6ZNB6 911 aa26.93■■□□□ 1.9
LSM7-202ENST00000585395 CCDC69A6NI79 296 aa26.92■■□□□ 1.9
LSM7-202ENST00000585395 PGK2P07205 417 aa26.92■■□□□ 1.9
LSM7-202ENST00000585395 PDHBP11177 359 aa26.92■■□□□ 1.9
LSM7-202ENST00000585395 LIFRP42702 1097 aa26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms