RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.81■■□□□ 1.08
TOP3A-220ENST00000585031 USP17L12C9JPN9 530 aa21.81■■□□□ 1.08
TOP3A-220ENST00000585031 USP17L21D6R901 530 aa21.81■■□□□ 1.08
TOP3A-220ENST00000585031 APBB1O00213 710 aa21.81■■□□□ 1.08
TOP3A-220ENST00000585031 RFXAPO00287 272 aa21.81■■□□□ 1.08
TOP3A-220ENST00000585031 RAD21O60216 631 aa21.81■■□□□ 1.08
TOP3A-220ENST00000585031 GPR37L1O60883 481 aa21.81■■□□□ 1.08
TOP3A-220ENST00000585031 MBD4O95243 580 aa21.81■■□□□ 1.08
TOP3A-220ENST00000585031 MICALL1Q8N3F8 863 aa21.81■■□□□ 1.08
TOP3A-220ENST00000585031 SLC43A3Q8NBI5 491 aa21.81■■□□□ 1.08
TOP3A-220ENST00000585031 DDX11Q96FC9 970 aa21.81■■□□□ 1.08
TOP3A-220ENST00000585031 YTHDC1Q96MU7 727 aaKnown RBP21.81■■□□□ 1.08
TOP3A-220ENST00000585031 KANSL2Q9H9L4 492 aa21.81■■□□□ 1.08
TOP3A-220ENST00000585031 MUC6Q6W4X9 2439 aa21.8■■□□□ 1.08
TOP3A-220ENST00000585031 COPB2P35606 906 aa21.8■■□□□ 1.08
TOP3A-220ENST00000585031 SLC4A3P48751 1232 aa21.8■■□□□ 1.08
TOP3A-220ENST00000585031 TTF1Q15361 905 aaPredicted RBP21.8■■□□□ 1.08
TOP3A-220ENST00000585031 CEP85Q6P2H3 762 aa21.8■■□□□ 1.08
TOP3A-220ENST00000585031 DNAJC2Q99543 621 aaKnown RBP21.8■■□□□ 1.08
TOP3A-220ENST00000585031 SLF1Q9BQI6 1058 aa21.8■■□□□ 1.08
TOP3A-220ENST00000585031 TEX13BQ9BXU2 312 aa21.8■■□□□ 1.08
TOP3A-220ENST00000585031 MTIF3Q9H2K0 278 aaKnown RBP21.8■■□□□ 1.08
TOP3A-220ENST00000585031 C11orf16Q9NQ32 467 aa21.8■■□□□ 1.08
TOP3A-220ENST00000585031 SCN5AQ14524 2016 aa21.8■■□□□ 1.08
TOP3A-220ENST00000585031 MYH4Q9Y623 1939 aa21.79■■□□□ 1.08
TOP3A-220ENST00000585031 TLL1O43897 1013 aa21.79■■□□□ 1.08
TOP3A-220ENST00000585031 CCL23P55773 120 aa21.79■■□□□ 1.08
TOP3A-220ENST00000585031 ZKSCAN2Q63HK3 967 aa21.79■■□□□ 1.08
TOP3A-220ENST00000585031 ZNF467Q7Z7K2 595 aaPredicted RBP21.79■■□□□ 1.08
TOP3A-220ENST00000585031 WNT8AQ9H1J5 351 aa21.79■■□□□ 1.08
TOP3A-220ENST00000585031 GOPCQ9HD26 462 aa21.79■■□□□ 1.08
TOP3A-220ENST00000585031 ATP8A2Q9NTI2 1148 aa21.79■■□□□ 1.08
TOP3A-220ENST00000585031 MYH7P12883 1935 aa21.78■■□□□ 1.08
TOP3A-220ENST00000585031 NKX3-2P78367 333 aa21.78■■□□□ 1.08
TOP3A-220ENST00000585031 CXCL17Q6UXB2 119 aa21.78■■□□□ 1.08
TOP3A-220ENST00000585031 ARMCX2Q7L311 632 aa21.78■■□□□ 1.08
TOP3A-220ENST00000585031 CPXCR1Q8N123 301 aa21.78■■□□□ 1.08
TOP3A-220ENST00000585031 KHSRPQ92945 711 aaKnown RBP eCLIP21.78■■□□□ 1.08
TOP3A-220ENST00000585031 TRPV6Q9H1D0 765 aa21.78■■□□□ 1.08
TOP3A-220ENST00000585031 ABHD16BQ9H3Z7 469 aa21.78■■□□□ 1.08
TOP3A-220ENST00000585031 HIPK3Q9H422 1215 aa21.78■■□□□ 1.08
TOP3A-220ENST00000585031 PCDHA11Q9Y5I1 949 aa21.78■■□□□ 1.08
TOP3A-220ENST00000585031 MTCH2Q9Y6C9 303 aa21.78■■□□□ 1.08
TOP3A-220ENST00000585031 DDX49Q9Y6V7 483 aaKnown RBP21.78■■□□□ 1.08
TOP3A-220ENST00000585031 TLR3O15455 904 aaKnown RBP21.77■■□□□ 1.08
TOP3A-220ENST00000585031 ADD2P35612 726 aa21.77■■□□□ 1.08
TOP3A-220ENST00000585031 CNTN2Q02246 1040 aa21.77■■□□□ 1.08
TOP3A-220ENST00000585031 TMEM63BQ5T3F8 832 aa21.77■■□□□ 1.08
TOP3A-220ENST00000585031 KRT40Q6A162 431 aa21.77■■□□□ 1.08
TOP3A-220ENST00000585031 CTR9Q6PD62 1173 aa21.77■■□□□ 1.08
TOP3A-220ENST00000585031 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.77■■□□□ 1.08
TOP3A-220ENST00000585031 CCDC144CPQ8IYA2 1237 aa21.77■■□□□ 1.08
TOP3A-220ENST00000585031 NOC4LQ9BVI4 516 aaKnown RBP21.77■■□□□ 1.08
TOP3A-220ENST00000585031 RAVER2Q9HCJ3 691 aaKnown RBP21.77■■□□□ 1.08
TOP3A-220ENST00000585031 BRWD1Q9NSI6 2320 aa21.77■■□□□ 1.07
TOP3A-220ENST00000585031 EPOPA6NHQ4 379 aa21.76■■□□□ 1.07
TOP3A-220ENST00000585031 LRRC37A2A6NM11 1700 aa21.76■■□□□ 1.07
TOP3A-220ENST00000585031 ATP2A1O14983 1001 aa21.76■■□□□ 1.07
TOP3A-220ENST00000585031 PPP2R2DQ66LE6 453 aa21.76■■□□□ 1.07
TOP3A-220ENST00000585031 RHPN1Q8TCX5 695 aa21.76■■□□□ 1.07
TOP3A-220ENST00000585031 COG5Q9UP83 839 aa21.76■■□□□ 1.07
TOP3A-220ENST00000585031 ZBED9Q6R2W3 1325 aa21.76■■□□□ 1.07
TOP3A-220ENST00000585031 F5H6K3 240 aa21.75■■□□□ 1.07
TOP3A-220ENST00000585031 NDUFB10O96000 172 aa21.75■■□□□ 1.07
TOP3A-220ENST00000585031 KLRC3Q07444 240 aa21.75■■□□□ 1.07
TOP3A-220ENST00000585031 SKIV2LQ15477 1246 aaKnown RBP21.75■■□□□ 1.07
TOP3A-220ENST00000585031 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.75■■□□□ 1.07
TOP3A-220ENST00000585031 SCLYQ96I15 445 aa21.75■■□□□ 1.07
TOP3A-220ENST00000585031 SPC25Q9HBM1 224 aa21.75■■□□□ 1.07
TOP3A-220ENST00000585031 B4GALT4O60513 344 aa21.74■■□□□ 1.07
TOP3A-220ENST00000585031 ARHGEF15O94989 841 aa21.74■■□□□ 1.07
TOP3A-220ENST00000585031 ITGA7Q13683 1181 aa21.74■■□□□ 1.07
TOP3A-220ENST00000585031 ALYREFQ86V81 257 aaKnown RBP21.74■■□□□ 1.07
TOP3A-220ENST00000585031 ITPRIPQ8IWB1 547 aa21.74■■□□□ 1.07
TOP3A-220ENST00000585031 PRPF38AQ8NAV1 312 aaKnown RBP21.74■■□□□ 1.07
TOP3A-220ENST00000585031 AGBL1Q96MI9 1066 aa21.74■■□□□ 1.07
TOP3A-220ENST00000585031 CERS4Q9HA82 394 aa21.74■■□□□ 1.07
TOP3A-220ENST00000585031 GNEQ9Y223 722 aaKnown RBP21.74■■□□□ 1.07
TOP3A-220ENST00000585031 SLC4A7Q9Y6M7 1214 aa21.74■■□□□ 1.07
TOP3A-220ENST00000585031 LCTP09848 1927 aa21.73■■□□□ 1.07
TOP3A-220ENST00000585031 RASA1P20936 1047 aa21.73■■□□□ 1.07
TOP3A-220ENST00000585031 PSMC6P62333 389 aa21.73■■□□□ 1.07
TOP3A-220ENST00000585031 TTLL4Q14679 1199 aa21.73■■□□□ 1.07
TOP3A-220ENST00000585031 ERC1Q8IUD2 1116 aa21.73■■□□□ 1.07
TOP3A-220ENST00000585031 STK11IPQ8N1F8 1099 aa21.73■■□□□ 1.07
TOP3A-220ENST00000585031 ANKRD35Q8N283 1001 aa21.73■■□□□ 1.07
TOP3A-220ENST00000585031 SLC38A10Q9HBR0 1119 aa21.73■■□□□ 1.07
TOP3A-220ENST00000585031 SOWAHBA6NEL2 793 aa21.72■■□□□ 1.07
TOP3A-220ENST00000585031 PI4K2BG5E9Z4 385 aa21.72■■□□□ 1.07
TOP3A-220ENST00000585031 TNFAIP2Q03169 654 aa21.72■■□□□ 1.07
TOP3A-220ENST00000585031 TET1Q8NFU7 2136 aa21.72■■□□□ 1.07
TOP3A-220ENST00000585031 KIFC2Q96AC6 838 aa21.72■■□□□ 1.07
TOP3A-220ENST00000585031 PAG1Q9NWQ8 432 aa21.72■■□□□ 1.07
TOP3A-220ENST00000585031 NYAP2Q9P242 653 aa21.72■■□□□ 1.07
TOP3A-220ENST00000585031 PTPRSQ13332 1948 aa21.71■■□□□ 1.07
TOP3A-220ENST00000585031 RPUSD2Q8IZ73 545 aaKnown RBP21.71■■□□□ 1.07
TOP3A-220ENST00000585031 FAM133AQ8N9E0 248 aa21.71■■□□□ 1.07
TOP3A-220ENST00000585031 PUS7LQ9H0K6 701 aaKnown RBP21.71■■□□□ 1.07
TOP3A-220ENST00000585031 BCL11AQ9H165 835 aa21.71■■□□□ 1.07
TOP3A-220ENST00000585031 BOLA2Q9H3K6 86 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms