RNA–Protein interactions for RNA: ENST00000584939.1

ITGB4-213, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-213ENST00000584939 CCDC174Q6PII3 467 aa20.21■□□□□ 0.83
ITGB4-213ENST00000584939 MAMDC4Q6UXC1 1216 aa20.21■□□□□ 0.83
ITGB4-213ENST00000584939 ZNF467Q7Z7K2 595 aaPredicted RBP20.21■□□□□ 0.83
ITGB4-213ENST00000584939 GDF15Q99988 308 aa20.21■□□□□ 0.83
ITGB4-213ENST00000584939 ZNFX1Q9P2E3 1918 aaKnown RBP20.21■□□□□ 0.83
ITGB4-213ENST00000584939 SYNGAP1Q96PV0 1343 aa20.21■□□□□ 0.83
ITGB4-213ENST00000584939 TKFCQ3LXA3 575 aa20.2■□□□□ 0.82
ITGB4-213ENST00000584939 TTC14Q96N46 770 aa20.2■□□□□ 0.82
ITGB4-213ENST00000584939 ACAD9Q9H845 621 aa20.2■□□□□ 0.82
ITGB4-213ENST00000584939 XPNPEP3Q9NQH7 507 aa20.2■□□□□ 0.82
ITGB4-213ENST00000584939 RNF146Q9NTX7 359 aa20.2■□□□□ 0.82
ITGB4-213ENST00000584939 FRMPD3Q5JV73 1810 aa20.19■□□□□ 0.82
ITGB4-213ENST00000584939 A0A1W2PPC1 479 aa20.19■□□□□ 0.82
ITGB4-213ENST00000584939 ALAS1P13196 640 aa20.19■□□□□ 0.82
ITGB4-213ENST00000584939 AKR1A1P14550 325 aa20.19■□□□□ 0.82
ITGB4-213ENST00000584939 BMP8BP34820 402 aa20.19■□□□□ 0.82
ITGB4-213ENST00000584939 SLC16A2P36021 539 aa20.19■□□□□ 0.82
ITGB4-213ENST00000584939 MAGEA10P43363 369 aaPredicted RBP20.19■□□□□ 0.82
ITGB4-213ENST00000584939 TTC22Q5TAA0 569 aa20.19■□□□□ 0.82
ITGB4-213ENST00000584939 TTBK2Q6IQ55 1244 aa20.19■□□□□ 0.82
ITGB4-213ENST00000584939 ESR2Q92731 530 aa20.19■□□□□ 0.82
ITGB4-213ENST00000584939 TRERF1Q96PN7 1200 aa20.19■□□□□ 0.82
ITGB4-213ENST00000584939 DSCC1Q9BVC3 393 aa20.19■□□□□ 0.82
ITGB4-213ENST00000584939 NEDD4P46934 1319 aa20.19■□□□□ 0.82
ITGB4-213ENST00000584939 PGK1P00558 417 aa20.18■□□□□ 0.82
ITGB4-213ENST00000584939 ADCYAP1R1P41586 468 aa20.18■□□□□ 0.82
ITGB4-213ENST00000584939 RTP1P59025 263 aa20.18■□□□□ 0.82
ITGB4-213ENST00000584939 BTNL9Q6UXG8 535 aa20.18■□□□□ 0.82
ITGB4-213ENST00000584939 SLC39A5Q6ZMH5 540 aa20.18■□□□□ 0.82
ITGB4-213ENST00000584939 FGD4Q96M96 766 aa20.18■□□□□ 0.82
ITGB4-213ENST00000584939 GPCPD1Q9NPB8 672 aa20.18■□□□□ 0.82
ITGB4-213ENST00000584939 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.18■□□□□ 0.82
ITGB4-213ENST00000584939 ZHX1Q9UKY1 873 aaPredicted RBP20.18■□□□□ 0.82
ITGB4-213ENST00000584939 FAM184BQ9ULE4 1060 aa20.18■□□□□ 0.82
ITGB4-213ENST00000584939 POTEB2H3BUK9 544 aa20.17■□□□□ 0.82
ITGB4-213ENST00000584939 CNTN2Q02246 1040 aa20.17■□□□□ 0.82
ITGB4-213ENST00000584939 SYDE2Q5VT97 1194 aa20.17■□□□□ 0.82
ITGB4-213ENST00000584939 RNF180Q86T96 592 aa20.17■□□□□ 0.82
ITGB4-213ENST00000584939 SKAP1Q86WV1 359 aa20.17■□□□□ 0.82
ITGB4-213ENST00000584939 FERMT2Q96AC1 680 aa20.17■□□□□ 0.82
ITGB4-213ENST00000584939 LENG1Q96BZ8 264 aaPredicted RBP20.17■□□□□ 0.82
ITGB4-213ENST00000584939 ZKSCAN3Q9BRR0 538 aa20.17■□□□□ 0.82
ITGB4-213ENST00000584939 A1CFQ9NQ94 594 aaKnown RBP20.17■□□□□ 0.82
ITGB4-213ENST00000584939 PCDH10Q9P2E7 1040 aa20.17■□□□□ 0.82
ITGB4-213ENST00000584939 CTNNA3Q9UI47 895 aa20.17■□□□□ 0.82
ITGB4-213ENST00000584939 CCPG1Q9ULG6 757 aa20.17■□□□□ 0.82
ITGB4-213ENST00000584939 FRMPD2Q68DX3 1309 aaPredicted RBP20.17■□□□□ 0.82
ITGB4-213ENST00000584939 PDHBP11177 359 aa20.16■□□□□ 0.82
ITGB4-213ENST00000584939 ACVR2BQ13705 512 aa20.16■□□□□ 0.82
ITGB4-213ENST00000584939 IMMTQ16891 758 aaKnown RBP20.16■□□□□ 0.82
ITGB4-213ENST00000584939 MUM1L1Q5H9M0 696 aa20.16■□□□□ 0.82
ITGB4-213ENST00000584939 ARMCX2Q7L311 632 aa20.16■□□□□ 0.82
ITGB4-213ENST00000584939 FAM133AQ8N9E0 248 aa20.16■□□□□ 0.82
ITGB4-213ENST00000584939 RANBP17Q9H2T7 1088 aaKnown RBP20.16■□□□□ 0.82
ITGB4-213ENST00000584939 PHF24Q9UPV7 400 aa20.16■□□□□ 0.82
ITGB4-213ENST00000584939 ATP11BQ9Y2G3 1177 aa20.16■□□□□ 0.82
ITGB4-213ENST00000584939 PLXNA1Q9UIW2 1896 aa20.16■□□□□ 0.82
ITGB4-213ENST00000584939 KDM4AO75164 1064 aa20.15■□□□□ 0.82
ITGB4-213ENST00000584939 ICAM1P05362 532 aa20.15■□□□□ 0.82
ITGB4-213ENST00000584939 NT5C2P49902 561 aa20.15■□□□□ 0.82
ITGB4-213ENST00000584939 DGKHQ86XP1 1220 aa20.15■□□□□ 0.82
ITGB4-213ENST00000584939 CCDC144CPQ8IYA2 1237 aa20.15■□□□□ 0.82
ITGB4-213ENST00000584939 IL25Q9H293 177 aa20.15■□□□□ 0.82
ITGB4-213ENST00000584939 ABHD16BQ9H3Z7 469 aa20.15■□□□□ 0.82
ITGB4-213ENST00000584939 SOWAHBA6NEL2 793 aa20.14■□□□□ 0.81
ITGB4-213ENST00000584939 B4E1Z4 1266 aa20.14■□□□□ 0.81
ITGB4-213ENST00000584939 MDM2Q00987 491 aaPredicted RBP20.14■□□□□ 0.81
ITGB4-213ENST00000584939 ZNF543Q08ER8 600 aa20.14■□□□□ 0.81
ITGB4-213ENST00000584939 CCDC178Q5BJE1 867 aa20.14■□□□□ 0.81
ITGB4-213ENST00000584939 CENPQQ7L2Z9 268 aaPredicted RBP20.14■□□□□ 0.81
ITGB4-213ENST00000584939 IQCA1Q86XH1 822 aa20.14■□□□□ 0.81
ITGB4-213ENST00000584939 UBE2OQ9C0C9 1292 aaKnown RBP20.14■□□□□ 0.81
ITGB4-213ENST00000584939 TRIOBPQ9H2D6 2365 aa20.14■□□□□ 0.81
ITGB4-213ENST00000584939 SYNRGQ9UMZ2 1314 aa20.13■□□□□ 0.81
ITGB4-213ENST00000584939 ADAMTS4O75173 837 aa20.13■□□□□ 0.81
ITGB4-213ENST00000584939 DUSP11O75319 330 aaKnown RBP20.13■□□□□ 0.81
ITGB4-213ENST00000584939 SNHG28P0DPA3 235 aa20.13■□□□□ 0.81
ITGB4-213ENST00000584939 SNX17Q15036 470 aa20.13■□□□□ 0.81
ITGB4-213ENST00000584939 CCDC144BQ3MJ40 725 aa20.13■□□□□ 0.81
ITGB4-213ENST00000584939 TRIM60Q495X7 471 aa20.13■□□□□ 0.81
ITGB4-213ENST00000584939 NSMFQ6X4W1 530 aa20.13■□□□□ 0.81
ITGB4-213ENST00000584939 CYP39A1Q9NYL5 469 aa20.13■□□□□ 0.81
ITGB4-213ENST00000584939 PRKAG2Q9UGJ0 569 aa20.13■□□□□ 0.81
ITGB4-213ENST00000584939 ASB14A6NK59 587 aa20.12■□□□□ 0.81
ITGB4-213ENST00000584939 ZSCAN10Q96SZ4 725 aaPredicted RBP20.12■□□□□ 0.81
ITGB4-213ENST00000584939 LBHD1Q9BQE6 289 aaPredicted RBP20.12■□□□□ 0.81
ITGB4-213ENST00000584939 TSEN34Q9BSV6 310 aaKnown RBP20.12■□□□□ 0.81
ITGB4-213ENST00000584939 ZSWIM5Q9P217 1185 aa20.12■□□□□ 0.81
ITGB4-213ENST00000584939 SMCHD1A6NHR9 2005 aa20.11■□□□□ 0.81
ITGB4-213ENST00000584939 SOX1O00570 391 aaPredicted RBP20.11■□□□□ 0.81
ITGB4-213ENST00000584939 CHMLP26374 656 aa20.11■□□□□ 0.81
ITGB4-213ENST00000584939 C1orf53Q5VUE5 145 aa20.11■□□□□ 0.81
ITGB4-213ENST00000584939 PNMA1Q8ND90 353 aa20.11■□□□□ 0.81
ITGB4-213ENST00000584939 KLHDC9Q8NEP7 349 aa20.11■□□□□ 0.81
ITGB4-213ENST00000584939 RUFY2Q8WXA3 655 aa20.11■□□□□ 0.81
ITGB4-213ENST00000584939 ANKS1AQ92625 1134 aa20.11■□□□□ 0.81
ITGB4-213ENST00000584939 KRT23Q9C075 422 aa20.11■□□□□ 0.81
ITGB4-213ENST00000584939 KATNBL1Q9H079 304 aa20.11■□□□□ 0.81
ITGB4-213ENST00000584939 KAT14Q9H8E8 782 aa20.11■□□□□ 0.81
ITGB4-213ENST00000584939 CNNM2Q9H8M5 875 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms