RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 MYCP01106 439 aaPredicted RBP19.02■□□□□ 0.64
ERBB2-222ENST00000584908 SLC16A2P36021 539 aa19.02■□□□□ 0.64
ERBB2-222ENST00000584908 GJA8P48165 433 aa19.02■□□□□ 0.64
ERBB2-222ENST00000584908 KCTD2Q14681 263 aa19.02■□□□□ 0.64
ERBB2-222ENST00000584908 TKFCQ3LXA3 575 aa19.02■□□□□ 0.64
ERBB2-222ENST00000584908 MYH6P13533 1939 aa19.02■□□□□ 0.64
ERBB2-222ENST00000584908 DNAJC25-GNG10A0A024R161 153 aa19.01■□□□□ 0.63
ERBB2-222ENST00000584908 ERICH2A1L162 156 aa19.01■□□□□ 0.63
ERBB2-222ENST00000584908 ICAM1P05362 532 aa19.01■□□□□ 0.63
ERBB2-222ENST00000584908 PRKAR2AP13861 404 aaKnown RBP19.01■□□□□ 0.63
ERBB2-222ENST00000584908 EN2P19622 333 aaPredicted RBP19.01■□□□□ 0.63
ERBB2-222ENST00000584908 CACNB2Q08289 660 aaPredicted RBP19.01■□□□□ 0.63
ERBB2-222ENST00000584908 ZNF792Q3KQV3 632 aa19.01■□□□□ 0.63
ERBB2-222ENST00000584908 KCNB2Q92953 911 aa19.01■□□□□ 0.63
ERBB2-222ENST00000584908 AGBL1Q96MI9 1066 aa19.01■□□□□ 0.63
ERBB2-222ENST00000584908 PNMA2Q9UL42 364 aa19.01■□□□□ 0.63
ERBB2-222ENST00000584908 REC8O95072 547 aa19■□□□□ 0.63
ERBB2-222ENST00000584908 MCM5P33992 734 aa19■□□□□ 0.63
ERBB2-222ENST00000584908 WTAPQ15007 396 aa19■□□□□ 0.63
ERBB2-222ENST00000584908 MFSD14CQ5VZR4 134 aa19■□□□□ 0.63
ERBB2-222ENST00000584908 CHST3Q7LGC8 479 aa19■□□□□ 0.63
ERBB2-222ENST00000584908 SHISA4Q96DD7 197 aa19■□□□□ 0.63
ERBB2-222ENST00000584908 MAML3Q96JK9 1138 aa19■□□□□ 0.63
ERBB2-222ENST00000584908 XRN2Q9H0D6 950 aaKnown RBP eCLIP19■□□□□ 0.63
ERBB2-222ENST00000584908 ACAD9Q9H845 621 aa19■□□□□ 0.63
ERBB2-222ENST00000584908 SENP2Q9HC62 589 aa19■□□□□ 0.63
ERBB2-222ENST00000584908 HMX1Q9NP08 348 aaPredicted RBP19■□□□□ 0.63
ERBB2-222ENST00000584908 WDR19Q8NEZ3 1342 aa19■□□□□ 0.63
ERBB2-222ENST00000584908 FRMPD3Q5JV73 1810 aa19■□□□□ 0.63
ERBB2-222ENST00000584908 PRC1O43663 620 aa19■□□□□ 0.63
ERBB2-222ENST00000584908 SGPL1O95470 568 aa19■□□□□ 0.63
ERBB2-222ENST00000584908 PARP1P09874 1014 aaKnown RBP19■□□□□ 0.63
ERBB2-222ENST00000584908 GOLGA8HP0CJ92 632 aa19■□□□□ 0.63
ERBB2-222ENST00000584908 MLLT1Q03111 559 aaPredicted RBP19■□□□□ 0.63
ERBB2-222ENST00000584908 TROAPQ12815 778 aa19■□□□□ 0.63
ERBB2-222ENST00000584908 COL9A3Q14050 684 aaPredicted RBP19■□□□□ 0.63
ERBB2-222ENST00000584908 TMEM67Q5HYA8 995 aa19■□□□□ 0.63
ERBB2-222ENST00000584908 RASEFQ8IZ41 740 aa19■□□□□ 0.63
ERBB2-222ENST00000584908 U2AF1L4Q8WU68 220 aaKnown RBP19■□□□□ 0.63
ERBB2-222ENST00000584908 TMEM87BQ96K49 555 aa19■□□□□ 0.63
ERBB2-222ENST00000584908 CRISPLD2Q9H0B8 497 aa19■□□□□ 0.63
ERBB2-222ENST00000584908 LY9Q9HBG7 655 aa19■□□□□ 0.63
ERBB2-222ENST00000584908 LCTP09848 1927 aa18.99■□□□□ 0.63
ERBB2-222ENST00000584908 PDE4DIPQ5VU43 2346 aa18.99■□□□□ 0.63
ERBB2-222ENST00000584908 PALM3A6NDB9 673 aaPredicted RBP18.99■□□□□ 0.63
ERBB2-222ENST00000584908 PGK2P07205 417 aa18.99■□□□□ 0.63
ERBB2-222ENST00000584908 HSPA4P34932 840 aa18.99■□□□□ 0.63
ERBB2-222ENST00000584908 LIFRP42702 1097 aa18.99■□□□□ 0.63
ERBB2-222ENST00000584908 SNAP25P60880 206 aa18.99■□□□□ 0.63
ERBB2-222ENST00000584908 CCDC174Q6PII3 467 aa18.99■□□□□ 0.63
ERBB2-222ENST00000584908 TRERF1Q96PN7 1200 aa18.99■□□□□ 0.63
ERBB2-222ENST00000584908 MAP3K14Q99558 947 aa18.99■□□□□ 0.63
ERBB2-222ENST00000584908 RNF146Q9NTX7 359 aa18.99■□□□□ 0.63
ERBB2-222ENST00000584908 MAD2L2Q9UI95 211 aa18.99■□□□□ 0.63
ERBB2-222ENST00000584908 SH2B2O14492 632 aaPredicted RBP18.98■□□□□ 0.63
ERBB2-222ENST00000584908 CYBAP13498 195 aa18.98■□□□□ 0.63
ERBB2-222ENST00000584908 KRT32Q14532 448 aa18.98■□□□□ 0.63
ERBB2-222ENST00000584908 GRM4Q14833 912 aa18.98■□□□□ 0.63
ERBB2-222ENST00000584908 ZNF467Q7Z7K2 595 aaPredicted RBP18.98■□□□□ 0.63
ERBB2-222ENST00000584908 TMTC2Q8N394 836 aa18.98■□□□□ 0.63
ERBB2-222ENST00000584908 MSL3Q8N5Y2 521 aaKnown RBP18.98■□□□□ 0.63
ERBB2-222ENST00000584908 DEFB118Q96PH6 123 aa18.98■□□□□ 0.63
ERBB2-222ENST00000584908 NEK1Q96PY6 1258 aa18.98■□□□□ 0.63
ERBB2-222ENST00000584908 UBA5Q9GZZ9 404 aa18.98■□□□□ 0.63
ERBB2-222ENST00000584908 NRBP1Q9UHY1 535 aa18.98■□□□□ 0.63
ERBB2-222ENST00000584908 CCPG1Q9ULG6 757 aa18.98■□□□□ 0.63
ERBB2-222ENST00000584908 ALAS1P13196 640 aa18.97■□□□□ 0.63
ERBB2-222ENST00000584908 CYP2C19P33261 490 aa18.97■□□□□ 0.63
ERBB2-222ENST00000584908 SLC4A3P48751 1232 aa18.97■□□□□ 0.63
ERBB2-222ENST00000584908 EXOSC10Q01780 885 aaKnown RBP18.97■□□□□ 0.63
ERBB2-222ENST00000584908 MAMDC4Q6UXC1 1216 aa18.97■□□□□ 0.63
ERBB2-222ENST00000584908 UBE2Q1Q7Z7E8 422 aa18.97■□□□□ 0.63
ERBB2-222ENST00000584908 ADGRF4Q8IZF3 695 aa18.97■□□□□ 0.63
ERBB2-222ENST00000584908 ANKRD35Q8N283 1001 aa18.97■□□□□ 0.63
ERBB2-222ENST00000584908 STAG2Q8N3U4 1231 aa18.97■□□□□ 0.63
ERBB2-222ENST00000584908 MTMR8Q96EF0 704 aa18.97■□□□□ 0.63
ERBB2-222ENST00000584908 DDX11Q96FC9 970 aa18.97■□□□□ 0.63
ERBB2-222ENST00000584908 CPVLQ9H3G5 476 aa18.97■□□□□ 0.63
ERBB2-222ENST00000584908 A1CFQ9NQ94 594 aaKnown RBP18.97■□□□□ 0.63
ERBB2-222ENST00000584908 HOMER2Q9NSB8 354 aa18.97■□□□□ 0.63
ERBB2-222ENST00000584908 MCM3APO60318 1980 aa18.97■□□□□ 0.63
ERBB2-222ENST00000584908 PFASO15067 1338 aa18.96■□□□□ 0.63
ERBB2-222ENST00000584908 KLRF2D3W0D1 207 aa18.96■□□□□ 0.63
ERBB2-222ENST00000584908 CCND3P30281 292 aaPredicted RBP18.96■□□□□ 0.63
ERBB2-222ENST00000584908 ADCK5Q3MIX3 580 aa18.96■□□□□ 0.63
ERBB2-222ENST00000584908 MUM1L1Q5H9M0 696 aa18.96■□□□□ 0.63
ERBB2-222ENST00000584908 CATIPQ7Z7H3 387 aa18.96■□□□□ 0.63
ERBB2-222ENST00000584908 FAM133AQ8N9E0 248 aa18.96■□□□□ 0.63
ERBB2-222ENST00000584908 TRPV1Q8NER1 839 aa18.96■□□□□ 0.63
ERBB2-222ENST00000584908 FGD4Q96M96 766 aa18.96■□□□□ 0.63
ERBB2-222ENST00000584908 TINF2Q9BSI4 451 aa18.96■□□□□ 0.63
ERBB2-222ENST00000584908 MAF1Q9H063 256 aa18.96■□□□□ 0.63
ERBB2-222ENST00000584908 JMJD4Q9H9V9 463 aa18.96■□□□□ 0.63
ERBB2-222ENST00000584908 GPHNQ9NQX3 736 aaPredicted RBP18.96■□□□□ 0.63
ERBB2-222ENST00000584908 BAZ2BQ9UIF8 2168 aaKnown RBP18.95■□□□□ 0.62
ERBB2-222ENST00000584908 DDAH1O94760 285 aa18.95■□□□□ 0.62
ERBB2-222ENST00000584908 HMGB1P09429 215 aaKnown RBP18.95■□□□□ 0.62
ERBB2-222ENST00000584908 CDC37Q16543 378 aaPredicted RBP18.95■□□□□ 0.62
ERBB2-222ENST00000584908 LHX8Q68G74 356 aa18.95■□□□□ 0.62
ERBB2-222ENST00000584908 DHX32Q7L7V1 743 aaKnown RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms