RNA–Protein interactions for RNA: ENST00000584216.5

COPS3-218, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-218ENST00000584216 NUP88Q99567 741 aaPredicted RBP15.98■□□□□ 0.15
COPS3-218ENST00000584216 BCL11AQ9H165 835 aa15.98■□□□□ 0.15
COPS3-218ENST00000584216 FEM1BQ9UK73 627 aa15.98■□□□□ 0.15
COPS3-218ENST00000584216 RIPK3Q9Y572 518 aa15.98■□□□□ 0.15
COPS3-218ENST00000584216 MUC3AQ02505 3323 aa15.98■□□□□ 0.15
COPS3-218ENST00000584216 MYH8P13535 1937 aa15.98■□□□□ 0.15
COPS3-218ENST00000584216 PLXNA1Q9UIW2 1896 aa15.97■□□□□ 0.15
COPS3-218ENST00000584216 ZEB2O60315 1214 aa15.97■□□□□ 0.15
COPS3-218ENST00000584216 FGBP02675 491 aa15.97■□□□□ 0.15
COPS3-218ENST00000584216 ACRP10323 421 aa15.97■□□□□ 0.15
COPS3-218ENST00000584216 NKX3-2P78367 333 aa15.97■□□□□ 0.15
COPS3-218ENST00000584216 SBK1Q52WX2 424 aa15.97■□□□□ 0.15
COPS3-218ENST00000584216 GIMAP6Q6P9H5 292 aa15.97■□□□□ 0.15
COPS3-218ENST00000584216 NOL8Q76FK4 1167 aaKnown RBP15.97■□□□□ 0.15
COPS3-218ENST00000584216 KIFC2Q96AC6 838 aa15.97■□□□□ 0.15
COPS3-218ENST00000584216 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.97■□□□□ 0.15
COPS3-218ENST00000584216 HIPK3Q9H422 1215 aa15.97■□□□□ 0.15
COPS3-218ENST00000584216 SLC38A10Q9HBR0 1119 aa15.97■□□□□ 0.15
COPS3-218ENST00000584216 COL11A1P12107 1806 aaPredicted RBP15.96■□□□□ 0.15
COPS3-218ENST00000584216 SMIM22K7EJ46 135 aa15.96■□□□□ 0.15
COPS3-218ENST00000584216 CD4P01730 458 aa15.96■□□□□ 0.15
COPS3-218ENST00000584216 RASA1P20936 1047 aa15.96■□□□□ 0.15
COPS3-218ENST00000584216 TNFAIP2Q03169 654 aa15.96■□□□□ 0.15
COPS3-218ENST00000584216 AAK1Q2M2I8 961 aa15.96■□□□□ 0.15
COPS3-218ENST00000584216 SLFNL1Q499Z3 407 aa15.96■□□□□ 0.15
COPS3-218ENST00000584216 CCDC144CPQ8IYA2 1237 aa15.96■□□□□ 0.15
COPS3-218ENST00000584216 CHMP4BQ9H444 224 aaKnown RBP15.96■□□□□ 0.15
COPS3-218ENST00000584216 RAVER2Q9HCJ3 691 aaKnown RBP15.96■□□□□ 0.15
COPS3-218ENST00000584216 CLIP2Q9UDT6 1046 aa15.96■□□□□ 0.15
COPS3-218ENST00000584216 SMCHD1A6NHR9 2005 aa15.95■□□□□ 0.14
COPS3-218ENST00000584216 ASB14A6NK59 587 aa15.95■□□□□ 0.14
COPS3-218ENST00000584216 ADCY6O43306 1168 aa15.95■□□□□ 0.14
COPS3-218ENST00000584216 CYP2C18P33260 490 aa15.95■□□□□ 0.14
COPS3-218ENST00000584216 CCDC85BQ15834 202 aaPredicted RBP15.95■□□□□ 0.14
COPS3-218ENST00000584216 RPUSD2Q8IZ73 545 aaKnown RBP15.95■□□□□ 0.14
COPS3-218ENST00000584216 ZNF444Q8N0Y2 327 aaPredicted RBP15.95■□□□□ 0.14
COPS3-218ENST00000584216 GMCL1P1Q8NEA9 526 aa15.95■□□□□ 0.14
COPS3-218ENST00000584216 PANK1Q8TE04 598 aa15.95■□□□□ 0.14
COPS3-218ENST00000584216 PUS7LQ9H0K6 701 aaKnown RBP15.95■□□□□ 0.14
COPS3-218ENST00000584216 AP5M1Q9H0R1 490 aa15.95■□□□□ 0.14
COPS3-218ENST00000584216 NKX2-4Q9H2Z4 354 aa15.95■□□□□ 0.14
COPS3-218ENST00000584216 ZNFX1Q9P2E3 1918 aaKnown RBP15.95■□□□□ 0.14
COPS3-218ENST00000584216 ADGRE1Q14246 886 aa15.94■□□□□ 0.14
COPS3-218ENST00000584216 TLK2Q86UE8 772 aa15.94■□□□□ 0.14
COPS3-218ENST00000584216 SLC43A3Q8NBI5 491 aa15.94■□□□□ 0.14
COPS3-218ENST00000584216 ACAD9Q9H845 621 aa15.94■□□□□ 0.14
COPS3-218ENST00000584216 CXXC1Q9P0U4 656 aaPredicted RBP15.94■□□□□ 0.14
COPS3-218ENST00000584216 DDX19BQ9UMR2 479 aa15.94■□□□□ 0.14
COPS3-218ENST00000584216 MINDY4BA8MYZ0 360 aa15.93■□□□□ 0.14
COPS3-218ENST00000584216 TTLL1O95922 423 aa15.93■□□□□ 0.14
COPS3-218ENST00000584216 GNAT2P19087 354 aa15.93■□□□□ 0.14
COPS3-218ENST00000584216 IRX5P78411 483 aaPredicted RBP15.93■□□□□ 0.14
COPS3-218ENST00000584216 ITGA7Q13683 1181 aa15.93■□□□□ 0.14
COPS3-218ENST00000584216 FSCN1Q16658 493 aaKnown RBP15.93■□□□□ 0.14
COPS3-218ENST00000584216 TKFCQ3LXA3 575 aa15.93■□□□□ 0.14
COPS3-218ENST00000584216 PPP2R2DQ66LE6 453 aa15.93■□□□□ 0.14
COPS3-218ENST00000584216 CXCL17Q6UXB2 119 aa15.93■□□□□ 0.14
COPS3-218ENST00000584216 OTOP2Q7RTS6 562 aa15.93■□□□□ 0.14
COPS3-218ENST00000584216 MKL1Q969V6 931 aa15.93■□□□□ 0.14
COPS3-218ENST00000584216 FGD4Q96M96 766 aa15.93■□□□□ 0.14
COPS3-218ENST00000584216 STRBPQ96SI9 672 aaKnown RBP15.93■□□□□ 0.14
COPS3-218ENST00000584216 C1QTNF1Q9BXJ1 281 aa15.93■□□□□ 0.14
COPS3-218ENST00000584216 HOMER2Q9NSB8 354 aa15.93■□□□□ 0.14
COPS3-218ENST00000584216 COG6Q9Y2V7 657 aa15.93■□□□□ 0.14
COPS3-218ENST00000584216 SLC4A7Q9Y6M7 1214 aa15.93■□□□□ 0.14
COPS3-218ENST00000584216 IGKV6D-41A0A0C4DH26 115 aa15.92■□□□□ 0.14
COPS3-218ENST00000584216 CTAGE5O15320 804 aa15.92■□□□□ 0.14
COPS3-218ENST00000584216 PFKMP08237 780 aa15.92■□□□□ 0.14
COPS3-218ENST00000584216 BMP3P12645 472 aa15.92■□□□□ 0.14
COPS3-218ENST00000584216 PLA2G5P39877 138 aa15.92■□□□□ 0.14
COPS3-218ENST00000584216 STAT2P52630 851 aa15.92■□□□□ 0.14
COPS3-218ENST00000584216 BEX3Q00994 111 aa15.92■□□□□ 0.14
COPS3-218ENST00000584216 PPP4R3BQ5MIZ7 849 aa15.92■□□□□ 0.14
COPS3-218ENST00000584216 FAM160B2Q86V87 743 aa15.92■□□□□ 0.14
COPS3-218ENST00000584216 FAM133AQ8N9E0 248 aa15.92■□□□□ 0.14
COPS3-218ENST00000584216 CHURC1Q8WUH1 139 aa15.92■□□□□ 0.14
COPS3-218ENST00000584216 FAM122AQ96E09 287 aa15.92■□□□□ 0.14
COPS3-218ENST00000584216 KATNBL1Q9H079 304 aa15.92■□□□□ 0.14
COPS3-218ENST00000584216 MTMR4Q9NYA4 1195 aa15.92■□□□□ 0.14
COPS3-218ENST00000584216 ISY1Q9ULR0 285 aaKnown RBP15.92■□□□□ 0.14
COPS3-218ENST00000584216 Q9Y3F1 56 aa15.92■□□□□ 0.14
COPS3-218ENST00000584216 PCDHA11Q9Y5I1 949 aa15.92■□□□□ 0.14
COPS3-218ENST00000584216 BAZ2AQ9UIF9 1905 aaKnown RBP15.92■□□□□ 0.14
COPS3-218ENST00000584216 GSG1L2A8MUP6 293 aa15.91■□□□□ 0.14
COPS3-218ENST00000584216 SUPT20HL2P0C7V6 817 aa15.91■□□□□ 0.14
COPS3-218ENST00000584216 TDO2P48775 406 aa15.91■□□□□ 0.14
COPS3-218ENST00000584216 HNRNPUQ00839 825 aaKnown RBP eCLIP15.91■□□□□ 0.14
COPS3-218ENST00000584216 IKQ13123 557 aaPredicted RBP15.91■□□□□ 0.14
COPS3-218ENST00000584216 STK11IPQ8N1F8 1099 aa15.91■□□□□ 0.14
COPS3-218ENST00000584216 CEP95Q96GE4 821 aa15.91■□□□□ 0.14
COPS3-218ENST00000584216 NOC4LQ9BVI4 516 aaKnown RBP15.91■□□□□ 0.14
COPS3-218ENST00000584216 LRRCC1Q9C099 1032 aa15.91■□□□□ 0.14
COPS3-218ENST00000584216 GNEQ9Y223 722 aaKnown RBP15.91■□□□□ 0.14
COPS3-218ENST00000584216 YBX2Q9Y2T7 364 aaKnown RBP15.91■□□□□ 0.14
COPS3-218ENST00000584216 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.9■□□□□ 0.14
COPS3-218ENST00000584216 ZBBXA8MT70 800 aa15.9■□□□□ 0.14
COPS3-218ENST00000584216 GTPBP6O43824 516 aaPredicted RBP15.9■□□□□ 0.14
COPS3-218ENST00000584216 CHGBP05060 677 aa15.9■□□□□ 0.14
COPS3-218ENST00000584216 SLC3A2P08195 630 aaKnown RBP15.9■□□□□ 0.14
COPS3-218ENST00000584216 CCL23P55773 120 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms