RNA–Protein interactions for RNA: ENST00000583948.5

NUP85-224, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,197 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-224ENST00000583948 POLR3DP05423 398 aaPredicted RBP13.83□□□□□ -0.2
NUP85-224ENST00000583948 GABPAQ06546 454 aa13.83□□□□□ -0.2
NUP85-224ENST00000583948 GRB10Q13322 594 aa13.83□□□□□ -0.2
NUP85-224ENST00000583948 CCDC144BQ3MJ40 725 aa13.83□□□□□ -0.2
NUP85-224ENST00000583948 SLFNL1Q499Z3 407 aa13.83□□□□□ -0.2
NUP85-224ENST00000583948 CCDC174Q6PII3 467 aa13.83□□□□□ -0.2
NUP85-224ENST00000583948 NOC4LQ9BVI4 516 aaKnown RBP13.83□□□□□ -0.2
NUP85-224ENST00000583948 ELP1O95163 1332 aa13.83□□□□□ -0.2
NUP85-224ENST00000583948 ROBO3Q96MS0 1386 aa13.83□□□□□ -0.2
NUP85-224ENST00000583948 PTPRSQ13332 1948 aa13.82□□□□□ -0.2
NUP85-224ENST00000583948 CYP2D7A0A087X1C5 515 aa13.82□□□□□ -0.2
NUP85-224ENST00000583948 DUSP11O75319 330 aaKnown RBP13.82□□□□□ -0.2
NUP85-224ENST00000583948 CYP2C9P11712 490 aa13.82□□□□□ -0.2
NUP85-224ENST00000583948 IL9P15248 144 aa13.82□□□□□ -0.2
NUP85-224ENST00000583948 STAT3P40763 770 aa13.82□□□□□ -0.2
NUP85-224ENST00000583948 TAP1Q03518 808 aa13.82□□□□□ -0.2
NUP85-224ENST00000583948 ACVR2BQ13705 512 aa13.82□□□□□ -0.2
NUP85-224ENST00000583948 TNNI3KQ59H18 835 aa13.82□□□□□ -0.2
NUP85-224ENST00000583948 RIOX2Q8IUF8 465 aa13.82□□□□□ -0.2
NUP85-224ENST00000583948 REPS2Q8NFH8 660 aa13.82□□□□□ -0.2
NUP85-224ENST00000583948 GDPD5Q8WTR4 605 aa13.82□□□□□ -0.2
NUP85-224ENST00000583948 SDR42E1Q8WUS8 393 aa13.82□□□□□ -0.2
NUP85-224ENST00000583948 CCDC8Q9H0W5 538 aaPredicted RBP13.82□□□□□ -0.2
NUP85-224ENST00000583948 NRBP1Q9UHY1 535 aa13.82□□□□□ -0.2
NUP85-224ENST00000583948 ZNF214Q9UL59 606 aaPredicted RBP13.82□□□□□ -0.2
NUP85-224ENST00000583948 FPGT-TNNI3KV9GXZ4 949 aa13.82□□□□□ -0.2
NUP85-224ENST00000583948 LCHNA4D1U4 455 aa13.81□□□□□ -0.2
NUP85-224ENST00000583948 VWA5AO00534 786 aa13.81□□□□□ -0.2
NUP85-224ENST00000583948 TLR3O15455 904 aaKnown RBP13.81□□□□□ -0.2
NUP85-224ENST00000583948 GTPBP6O43824 516 aaPredicted RBP13.81□□□□□ -0.2
NUP85-224ENST00000583948 GJA9P57773 515 aa13.81□□□□□ -0.2
NUP85-224ENST00000583948 TMEM67Q5HYA8 995 aa13.81□□□□□ -0.2
NUP85-224ENST00000583948 FAM83BQ5T0W9 1011 aa13.81□□□□□ -0.2
NUP85-224ENST00000583948 TTC6Q86TZ1 520 aa13.81□□□□□ -0.2
NUP85-224ENST00000583948 MB21D1Q8N884 522 aa13.81□□□□□ -0.2
NUP85-224ENST00000583948 AGBL1Q96MI9 1066 aa13.81□□□□□ -0.2
NUP85-224ENST00000583948 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.81□□□□□ -0.2
NUP85-224ENST00000583948 MROH7Q68CQ1 1323 aa13.81□□□□□ -0.2
NUP85-224ENST00000583948 PRR33A8MZF0 331 aa13.8□□□□□ -0.2
NUP85-224ENST00000583948 SLC25A27O95847 323 aa13.8□□□□□ -0.2
NUP85-224ENST00000583948 GNAI3P08754 354 aa13.8□□□□□ -0.2
NUP85-224ENST00000583948 CST5P28325 142 aaPredicted RBP13.8□□□□□ -0.2
NUP85-224ENST00000583948 G3BP1Q13283 466 aaKnown RBP eCLIP13.8□□□□□ -0.2
NUP85-224ENST00000583948 TET1Q8NFU7 2136 aa13.8□□□□□ -0.2
NUP85-224ENST00000583948 RIOK1Q9BRS2 568 aaKnown RBP13.8□□□□□ -0.2
NUP85-224ENST00000583948 UPF3AQ9H1J1 476 aaKnown RBP13.8□□□□□ -0.2
NUP85-224ENST00000583948 VCPKMTQ9H867 229 aa13.8□□□□□ -0.2
NUP85-224ENST00000583948 MCM9Q9NXL9 1143 aa13.8□□□□□ -0.2
NUP85-224ENST00000583948 MTUS1Q9ULD2 1270 aa13.8□□□□□ -0.2
NUP85-224ENST00000583948 ADAMTS5Q9UNA0 930 aa13.8□□□□□ -0.2
NUP85-224ENST00000583948 COG5Q9UP83 839 aa13.8□□□□□ -0.2
NUP85-224ENST00000583948 TMX2Q9Y320 296 aa13.8□□□□□ -0.2
NUP85-224ENST00000583948 MYH8P13535 1937 aa13.8□□□□□ -0.2
NUP85-224ENST00000583948 POU3F3P20264 500 aaPredicted RBP13.79□□□□□ -0.2
NUP85-224ENST00000583948 SSTR3P32745 418 aaPredicted RBP13.79□□□□□ -0.2
NUP85-224ENST00000583948 CNTN2Q02246 1040 aa13.79□□□□□ -0.2
NUP85-224ENST00000583948 ICA1Q05084 483 aa13.79□□□□□ -0.2
NUP85-224ENST00000583948 HDAC1Q13547 482 aaPredicted RBP13.79□□□□□ -0.2
NUP85-224ENST00000583948 ITGA7Q13683 1181 aa13.79□□□□□ -0.2
NUP85-224ENST00000583948 CPXCR1Q8N123 301 aa13.79□□□□□ -0.2
NUP85-224ENST00000583948 GJD3Q8N144 294 aa13.79□□□□□ -0.2
NUP85-224ENST00000583948 SLC43A3Q8NBI5 491 aa13.79□□□□□ -0.2
NUP85-224ENST00000583948 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.79□□□□□ -0.2
NUP85-224ENST00000583948 DDX11Q96FC9 970 aa13.79□□□□□ -0.2
NUP85-224ENST00000583948 TRMT13Q9NUP7 481 aaKnown RBP13.79□□□□□ -0.2
NUP85-224ENST00000583948 DBNLQ9UJU6 430 aaKnown RBP13.79□□□□□ -0.2
NUP85-224ENST00000583948 DIS3Q9Y2L1 958 aaKnown RBP13.79□□□□□ -0.2
NUP85-224ENST00000583948 BAZ2AQ9UIF9 1905 aaKnown RBP13.79□□□□□ -0.2
NUP85-224ENST00000583948 DNAJC25-GNG10A0A024R161 153 aa13.78□□□□□ -0.2
NUP85-224ENST00000583948 PRKAB2O43741 272 aa13.78□□□□□ -0.2
NUP85-224ENST00000583948 GNAI2P04899 355 aa13.78□□□□□ -0.2
NUP85-224ENST00000583948 CHGBP05060 677 aa13.78□□□□□ -0.2
NUP85-224ENST00000583948 EEF2P13639 858 aaKnown RBP13.78□□□□□ -0.2
NUP85-224ENST00000583948 MTX1Q13505 466 aa13.78□□□□□ -0.2
NUP85-224ENST00000583948 CCDC158Q5M9N0 1113 aa13.78□□□□□ -0.2
NUP85-224ENST00000583948 SNRNP48Q6IEG0 339 aaKnown RBP13.78□□□□□ -0.2
NUP85-224ENST00000583948 NOL8Q76FK4 1167 aaKnown RBP13.78□□□□□ -0.2
NUP85-224ENST00000583948 FAM178BQ8IXR5 827 aa13.78□□□□□ -0.2
NUP85-224ENST00000583948 PCSK9Q8NBP7 692 aaKnown RBP13.78□□□□□ -0.2
NUP85-224ENST00000583948 CHMP4CQ96CF2 233 aa13.78□□□□□ -0.2
NUP85-224ENST00000583948 KATNBL1Q9H079 304 aa13.78□□□□□ -0.2
NUP85-224ENST00000583948 MTIF3Q9H2K0 278 aaKnown RBP13.78□□□□□ -0.2
NUP85-224ENST00000583948 PDGFCQ9NRA1 345 aa13.78□□□□□ -0.2
NUP85-224ENST00000583948 MAMDC4Q6UXC1 1216 aa13.77□□□□□ -0.21
NUP85-224ENST00000583948 ARMCX2Q7L311 632 aa13.77□□□□□ -0.21
NUP85-224ENST00000583948 SKAP1Q86WV1 359 aa13.77□□□□□ -0.21
NUP85-224ENST00000583948 CCDC144CPQ8IYA2 1237 aa13.77□□□□□ -0.21
NUP85-224ENST00000583948 STK11IPQ8N1F8 1099 aa13.77□□□□□ -0.21
NUP85-224ENST00000583948 PIAS4Q8N2W9 510 aaPredicted RBP13.77□□□□□ -0.21
NUP85-224ENST00000583948 RAVER2Q9HCJ3 691 aaKnown RBP13.77□□□□□ -0.21
NUP85-224ENST00000583948 PPP1R9AQ9ULJ8 1098 aa13.77□□□□□ -0.21
NUP85-224ENST00000583948 WDR46O15213 610 aaKnown RBP13.76□□□□□ -0.21
NUP85-224ENST00000583948 DYNC1LI2O43237 492 aaPredicted RBP13.76□□□□□ -0.21
NUP85-224ENST00000583948 KCNA5P22460 613 aa13.76□□□□□ -0.21
NUP85-224ENST00000583948 CEP85Q6P2H3 762 aa13.76□□□□□ -0.21
NUP85-224ENST00000583948 TMEM179Q6ZVK1 233 aa13.76□□□□□ -0.21
NUP85-224ENST00000583948 EEPD1Q7L9B9 569 aa13.76□□□□□ -0.21
NUP85-224ENST00000583948 LCORLQ8N3X6 602 aa13.76□□□□□ -0.21
NUP85-224ENST00000583948 ARHGEF10LQ9HCE6 1279 aa13.76□□□□□ -0.21
NUP85-224ENST00000583948 ZNF318Q5VUA4 2279 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms