RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 ERCC3P19447 782 aa9.42□□□□□ -0.9
SMCHD1-210ENST00000583800 PDE4CQ08493 712 aa9.42□□□□□ -0.9
SMCHD1-210ENST00000583800 COG2Q14746 738 aa9.42□□□□□ -0.9
SMCHD1-210ENST00000583800 TTF1Q15361 905 aaPredicted RBP9.42□□□□□ -0.9
SMCHD1-210ENST00000583800 SLFNL1Q499Z3 407 aa9.42□□□□□ -0.9
SMCHD1-210ENST00000583800 TMED8Q6PL24 325 aaPredicted RBP9.42□□□□□ -0.9
SMCHD1-210ENST00000583800 RHPN1Q8TCX5 695 aa9.42□□□□□ -0.9
SMCHD1-210ENST00000583800 TATDN2Q93075 761 aa9.42□□□□□ -0.9
SMCHD1-210ENST00000583800 DYNLL2Q96FJ2 89 aa9.42□□□□□ -0.9
SMCHD1-210ENST00000583800 LBHD1Q9BQE6 289 aaPredicted RBP9.42□□□□□ -0.9
SMCHD1-210ENST00000583800 SPATC1LQ9H0A9 340 aa9.42□□□□□ -0.9
SMCHD1-210ENST00000583800 BCL11AQ9H165 835 aa9.42□□□□□ -0.9
SMCHD1-210ENST00000583800 DCP1AQ9NPI6 582 aaPredicted RBP9.42□□□□□ -0.9
SMCHD1-210ENST00000583800 NPDC1Q9NQX5 325 aaPredicted RBP9.42□□□□□ -0.9
SMCHD1-210ENST00000583800 PRKAG2Q9UGJ0 569 aa9.42□□□□□ -0.9
SMCHD1-210ENST00000583800 GREB1LQ9C091 1923 aaPredicted RBP9.42□□□□□ -0.9
SMCHD1-210ENST00000583800 UNC80Q8N2C7 3258 aa9.41□□□□□ -0.9
SMCHD1-210ENST00000583800 MCM3APO60318 1980 aa9.41□□□□□ -0.9
SMCHD1-210ENST00000583800 MYH4Q9Y623 1939 aa9.41□□□□□ -0.9
SMCHD1-210ENST00000583800 TCRBV5S4A2TA0A5A2 114 aa9.41□□□□□ -0.9
SMCHD1-210ENST00000583800 KBTBD13C9JR72 458 aa9.41□□□□□ -0.9
SMCHD1-210ENST00000583800 SMIM22K7EJ46 135 aa9.41□□□□□ -0.9
SMCHD1-210ENST00000583800 AKR1B1P15121 316 aa9.41□□□□□ -0.9
SMCHD1-210ENST00000583800 HNRNPUQ00839 825 aaKnown RBP eCLIP9.41□□□□□ -0.9
SMCHD1-210ENST00000583800 PLS1Q14651 629 aa9.41□□□□□ -0.9
SMCHD1-210ENST00000583800 TRIM60Q495X7 471 aa9.41□□□□□ -0.9
SMCHD1-210ENST00000583800 PRAMEF19Q5SWL8 479 aa9.41□□□□□ -0.9
SMCHD1-210ENST00000583800 OLFML2BQ68BL8 750 aa9.41□□□□□ -0.9
SMCHD1-210ENST00000583800 TMEM179Q6ZVK1 233 aa9.41□□□□□ -0.9
SMCHD1-210ENST00000583800 NCAPG2Q86XI2 1143 aa9.41□□□□□ -0.9
SMCHD1-210ENST00000583800 SPICE1Q8N0Z3 855 aa9.41□□□□□ -0.9
SMCHD1-210ENST00000583800 SHCBP1Q8NEM2 672 aa9.41□□□□□ -0.9
SMCHD1-210ENST00000583800 PANK1Q8TE04 598 aa9.41□□□□□ -0.9
SMCHD1-210ENST00000583800 ATG4CQ96DT6 458 aa9.41□□□□□ -0.9
SMCHD1-210ENST00000583800 ARMT1Q9H993 441 aa9.41□□□□□ -0.9
SMCHD1-210ENST00000583800 PRDM5Q9NQX1 630 aaPredicted RBP9.41□□□□□ -0.9
SMCHD1-210ENST00000583800 POLR3EQ9NVU0 708 aa9.41□□□□□ -0.9
SMCHD1-210ENST00000583800 LAMA2P24043 3122 aaKnown RBP9.4□□□□□ -0.9
SMCHD1-210ENST00000583800 A0A0C4DFX4 3053 aa9.4□□□□□ -0.9
SMCHD1-210ENST00000583800 SEPT4O43236 478 aa9.4□□□□□ -0.9
SMCHD1-210ENST00000583800 PRKAB2O43741 272 aa9.4□□□□□ -0.9
SMCHD1-210ENST00000583800 STRNO43815 780 aa9.4□□□□□ -0.9
SMCHD1-210ENST00000583800 FLOT1O75955 427 aa9.4□□□□□ -0.9
SMCHD1-210ENST00000583800 RBM25P49756 843 aaKnown RBP9.4□□□□□ -0.9
SMCHD1-210ENST00000583800 ICA1Q05084 483 aa9.4□□□□□ -0.9
SMCHD1-210ENST00000583800 FAM47AQ5JRC9 791 aa9.4□□□□□ -0.9
SMCHD1-210ENST00000583800 C9orf50Q5SZB4 431 aa9.4□□□□□ -0.9
SMCHD1-210ENST00000583800 ZNF697Q5TEC3 545 aa9.4□□□□□ -0.9
SMCHD1-210ENST00000583800 SLC39A5Q6ZMH5 540 aa9.4□□□□□ -0.9
SMCHD1-210ENST00000583800 SIAH1Q8IUQ4 282 aa9.4□□□□□ -0.9
SMCHD1-210ENST00000583800 CLASRPQ8N2M8 674 aaKnown RBP9.4□□□□□ -0.9
SMCHD1-210ENST00000583800 ARRDC4Q8NCT1 418 aa9.4□□□□□ -0.9
SMCHD1-210ENST00000583800 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.4□□□□□ -0.9
SMCHD1-210ENST00000583800 ARHGEF10LQ9HCE6 1279 aa9.4□□□□□ -0.9
SMCHD1-210ENST00000583800 HOXC10Q9NYD6 342 aa9.4□□□□□ -0.9
SMCHD1-210ENST00000583800 SWAP70Q9UH65 585 aa9.4□□□□□ -0.9
SMCHD1-210ENST00000583800 CYP2D7A0A087X1C5 515 aa9.39□□□□□ -0.91
SMCHD1-210ENST00000583800 MBD4O95243 580 aa9.39□□□□□ -0.91
SMCHD1-210ENST00000583800 CHGBP05060 677 aa9.39□□□□□ -0.91
SMCHD1-210ENST00000583800 IFIT2P09913 472 aaKnown RBP9.39□□□□□ -0.91
SMCHD1-210ENST00000583800 ADCYAP1R1P41586 468 aa9.39□□□□□ -0.91
SMCHD1-210ENST00000583800 TMEM132BQ14DG7 1078 aa9.39□□□□□ -0.91
SMCHD1-210ENST00000583800 SNX17Q15036 470 aa9.39□□□□□ -0.91
SMCHD1-210ENST00000583800 LRRC41Q15345 812 aa9.39□□□□□ -0.91
SMCHD1-210ENST00000583800 SHHQ15465 462 aa9.39□□□□□ -0.91
SMCHD1-210ENST00000583800 HSP90AB4PQ58FF6 505 aa9.39□□□□□ -0.91
SMCHD1-210ENST00000583800 FAM109BQ6ICB4 259 aaPredicted RBP9.39□□□□□ -0.91
SMCHD1-210ENST00000583800 SH3RF1Q7Z6J0 888 aa9.39□□□□□ -0.91
SMCHD1-210ENST00000583800 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.39□□□□□ -0.91
SMCHD1-210ENST00000583800 MB21D1Q8N884 522 aa9.39□□□□□ -0.91
SMCHD1-210ENST00000583800 BADQ92934 168 aa9.39□□□□□ -0.91
SMCHD1-210ENST00000583800 FERMT2Q96AC1 680 aa9.39□□□□□ -0.91
SMCHD1-210ENST00000583800 MAML3Q96JK9 1138 aa9.39□□□□□ -0.91
SMCHD1-210ENST00000583800 PHOX2BQ99453 314 aa9.39□□□□□ -0.91
SMCHD1-210ENST00000583800 COL25A1Q9BXS0 654 aaPredicted RBP9.39□□□□□ -0.91
SMCHD1-210ENST00000583800 MROH8Q9H579 483 aa9.39□□□□□ -0.91
SMCHD1-210ENST00000583800 VCPKMTQ9H867 229 aa9.39□□□□□ -0.91
SMCHD1-210ENST00000583800 PDLIM7Q9NR12 457 aa9.39□□□□□ -0.91
SMCHD1-210ENST00000583800 TMX2Q9Y320 296 aa9.39□□□□□ -0.91
SMCHD1-210ENST00000583800 TRIM43BA6NCK2 446 aa9.38□□□□□ -0.91
SMCHD1-210ENST00000583800 PATL2C9JE40 543 aaKnown RBP9.38□□□□□ -0.91
SMCHD1-210ENST00000583800 WDR46O15213 610 aaKnown RBP9.38□□□□□ -0.91
SMCHD1-210ENST00000583800 PGK2P07205 417 aa9.38□□□□□ -0.91
SMCHD1-210ENST00000583800 ADD2P35612 726 aa9.38□□□□□ -0.91
SMCHD1-210ENST00000583800 GGCXP38435 758 aa9.38□□□□□ -0.91
SMCHD1-210ENST00000583800 CDK8P49336 464 aa9.38□□□□□ -0.91
SMCHD1-210ENST00000583800 ABRAQ8N0Z2 381 aa9.38□□□□□ -0.91
SMCHD1-210ENST00000583800 TRIM43Q96BQ3 446 aaPredicted RBP9.38□□□□□ -0.91
SMCHD1-210ENST00000583800 KIF1BPQ96EK5 621 aa9.38□□□□□ -0.91
SMCHD1-210ENST00000583800 BOLA2Q9H3K6 86 aa9.38□□□□□ -0.91
SMCHD1-210ENST00000583800 SH2D4AQ9H788 454 aa9.38□□□□□ -0.91
SMCHD1-210ENST00000583800 FBXO28Q9NVF7 368 aa9.38□□□□□ -0.91
SMCHD1-210ENST00000583800 PAG1Q9NWQ8 432 aa9.38□□□□□ -0.91
SMCHD1-210ENST00000583800 SLC5A4Q9NY91 659 aa9.38□□□□□ -0.91
SMCHD1-210ENST00000583800 EYSQ5T1H1 3165 aa9.38□□□□□ -0.91
SMCHD1-210ENST00000583800 CDH23Q9H251 3354 aa9.37□□□□□ -0.91
SMCHD1-210ENST00000583800 RNF40O75150 1001 aa9.37□□□□□ -0.91
SMCHD1-210ENST00000583800 FCER1AP12319 257 aa9.37□□□□□ -0.91
SMCHD1-210ENST00000583800 EEF2P13639 858 aaKnown RBP9.37□□□□□ -0.91
SMCHD1-210ENST00000583800 TAL1P17542 331 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms