RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 MCF2L2Q86YR7 1114 aa10.79□□□□□ -0.68
UBBP4-201ENST00000583708 STAG2Q8N3U4 1231 aa10.79□□□□□ -0.68
UBBP4-201ENST00000583708 CCDC12Q8WUD4 166 aaPredicted RBP10.79□□□□□ -0.68
UBBP4-201ENST00000583708 GTF3C6Q969F1 213 aa10.79□□□□□ -0.68
UBBP4-201ENST00000583708 ATG4CQ96DT6 458 aa10.79□□□□□ -0.68
UBBP4-201ENST00000583708 AMNQ9BXJ7 453 aa10.79□□□□□ -0.68
UBBP4-201ENST00000583708 FAM217BQ9NTX9 383 aaPredicted RBP10.79□□□□□ -0.68
UBBP4-201ENST00000583708 FBXO28Q9NVF7 368 aa10.79□□□□□ -0.68
UBBP4-201ENST00000583708 ZNF214Q9UL59 606 aaPredicted RBP10.79□□□□□ -0.68
UBBP4-201ENST00000583708 TPCN1Q9ULQ1 816 aa10.79□□□□□ -0.68
UBBP4-201ENST00000583708 MRPL11Q9Y3B7 192 aaKnown RBP10.79□□□□□ -0.68
UBBP4-201ENST00000583708 LOC102724159A0A0B4J2E5 919 aa10.78□□□□□ -0.68
UBBP4-201ENST00000583708 GOLGA8HP0CJ92 632 aa10.78□□□□□ -0.68
UBBP4-201ENST00000583708 ADD1P35611 737 aaKnown RBP10.78□□□□□ -0.68
UBBP4-201ENST00000583708 HMGN5P82970 282 aaKnown RBP10.78□□□□□ -0.68
UBBP4-201ENST00000583708 SSRP1Q08945 709 aaKnown RBP10.78□□□□□ -0.68
UBBP4-201ENST00000583708 FUT2Q10981 343 aa10.78□□□□□ -0.68
UBBP4-201ENST00000583708 DGKZQ13574 1117 aa10.78□□□□□ -0.68
UBBP4-201ENST00000583708 TMEM132BQ14DG7 1078 aa10.78□□□□□ -0.68
UBBP4-201ENST00000583708 PWP2Q15269 919 aaKnown RBP10.78□□□□□ -0.68
UBBP4-201ENST00000583708 NTRK3Q16288 839 aa10.78□□□□□ -0.68
UBBP4-201ENST00000583708 TTBK2Q6IQ55 1244 aa10.78□□□□□ -0.68
UBBP4-201ENST00000583708 PPP1R18Q6NYC8 613 aa10.78□□□□□ -0.68
UBBP4-201ENST00000583708 FBXO11Q86XK2 927 aa10.78□□□□□ -0.68
UBBP4-201ENST00000583708 SRBD1Q8N5C6 995 aaKnown RBP10.78□□□□□ -0.68
UBBP4-201ENST00000583708 UBA5Q9GZZ9 404 aa10.78□□□□□ -0.68
UBBP4-201ENST00000583708 SH3GLB2Q9NR46 395 aa10.78□□□□□ -0.68
UBBP4-201ENST00000583708 SLC5A4Q9NY91 659 aa10.78□□□□□ -0.68
UBBP4-201ENST00000583708 MTMR7Q9Y216 660 aa10.78□□□□□ -0.68
UBBP4-201ENST00000583708 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.78□□□□□ -0.68
UBBP4-201ENST00000583708 CEP350Q5VT06 3117 aa10.78□□□□□ -0.68
UBBP4-201ENST00000583708 ABCB11O95342 1321 aa10.78□□□□□ -0.68
UBBP4-201ENST00000583708 FRMPD2Q68DX3 1309 aaPredicted RBP10.78□□□□□ -0.68
UBBP4-201ENST00000583708 STK36Q9NRP7 1315 aa10.78□□□□□ -0.68
UBBP4-201ENST00000583708 CNMDO75829 334 aa10.77□□□□□ -0.69
UBBP4-201ENST00000583708 DEXIO95424 95 aa10.77□□□□□ -0.69
UBBP4-201ENST00000583708 XBP1P17861 261 aa10.77□□□□□ -0.69
UBBP4-201ENST00000583708 CDC27P30260 824 aa10.77□□□□□ -0.69
UBBP4-201ENST00000583708 SLC16A2P36021 539 aa10.77□□□□□ -0.69
UBBP4-201ENST00000583708 FCGRTP55899 365 aa10.77□□□□□ -0.69
UBBP4-201ENST00000583708 GHRHRQ02643 423 aa10.77□□□□□ -0.69
UBBP4-201ENST00000583708 CDC37Q16543 378 aaPredicted RBP10.77□□□□□ -0.69
UBBP4-201ENST00000583708 ME3Q16798 604 aa10.77□□□□□ -0.69
UBBP4-201ENST00000583708 GALNT17Q6IS24 598 aa10.77□□□□□ -0.69
UBBP4-201ENST00000583708 TRMT44Q8IYL2 757 aaKnown RBP10.77□□□□□ -0.69
UBBP4-201ENST00000583708 ANKRD13CQ8N6S4 541 aa10.77□□□□□ -0.69
UBBP4-201ENST00000583708 COA7Q96BR5 231 aa10.77□□□□□ -0.69
UBBP4-201ENST00000583708 INTS4Q96HW7 963 aaKnown RBP10.77□□□□□ -0.69
UBBP4-201ENST00000583708 MYL10Q9BUA6 226 aa10.77□□□□□ -0.69
UBBP4-201ENST00000583708 MOV10L1Q9BXT6 1211 aaKnown RBP10.77□□□□□ -0.69
UBBP4-201ENST00000583708 BTBD7Q9P203 1132 aa10.77□□□□□ -0.69
UBBP4-201ENST00000583708 CCPG1Q9ULG6 757 aa10.77□□□□□ -0.69
UBBP4-201ENST00000583708 IVNS1ABPQ9Y6Y0 642 aa10.77□□□□□ -0.69
UBBP4-201ENST00000583708 SLC15A5A6NIM6 579 aa10.76□□□□□ -0.69
UBBP4-201ENST00000583708 B4DLN1 442 aa10.76□□□□□ -0.69
UBBP4-201ENST00000583708 CYTH3O43739 400 aa10.76□□□□□ -0.69
UBBP4-201ENST00000583708 FMNL1O95466 1100 aaPredicted RBP10.76□□□□□ -0.69
UBBP4-201ENST00000583708 TBC1D8O95759 1140 aa10.76□□□□□ -0.69
UBBP4-201ENST00000583708 FCER1AP12319 257 aa10.76□□□□□ -0.69
UBBP4-201ENST00000583708 MRPL12P52815 198 aaKnown RBP10.76□□□□□ -0.69
UBBP4-201ENST00000583708 CCT2P78371 535 aaKnown RBP10.76□□□□□ -0.69
UBBP4-201ENST00000583708 LACTBP83111 547 aaPredicted RBP10.76□□□□□ -0.69
UBBP4-201ENST00000583708 SCRN1Q12765 414 aa10.76□□□□□ -0.69
UBBP4-201ENST00000583708 BECN1Q14457 450 aa10.76□□□□□ -0.69
UBBP4-201ENST00000583708 PKN2Q16513 984 aaKnown RBP10.76□□□□□ -0.69
UBBP4-201ENST00000583708 QRICH1Q2TAL8 776 aa10.76□□□□□ -0.69
UBBP4-201ENST00000583708 SNRNP48Q6IEG0 339 aaKnown RBP10.76□□□□□ -0.69
UBBP4-201ENST00000583708 PLEKHH3Q7Z736 793 aa10.76□□□□□ -0.69
UBBP4-201ENST00000583708 SOCS4Q8WXH5 440 aa10.76□□□□□ -0.69
UBBP4-201ENST00000583708 TMX3Q96JJ7 454 aa10.76□□□□□ -0.69
UBBP4-201ENST00000583708 PAGR1Q9BTK6 254 aa10.76□□□□□ -0.69
UBBP4-201ENST00000583708 ACAD9Q9H845 621 aa10.76□□□□□ -0.69
UBBP4-201ENST00000583708 CWC22Q9HCG8 908 aaKnown RBP10.76□□□□□ -0.69
UBBP4-201ENST00000583708 VAT1LQ9HCJ6 419 aa10.76□□□□□ -0.69
UBBP4-201ENST00000583708 PRDM10Q9NQV6 1147 aa10.76□□□□□ -0.69
UBBP4-201ENST00000583708 CPA4Q9UI42 421 aa10.76□□□□□ -0.69
UBBP4-201ENST00000583708 DIS3Q9Y2L1 958 aaKnown RBP10.76□□□□□ -0.69
UBBP4-201ENST00000583708 PCDHA1Q9Y5I3 950 aa10.76□□□□□ -0.69
UBBP4-201ENST00000583708 V9GY48 417 aaPredicted RBP10.76□□□□□ -0.69
UBBP4-201ENST00000583708 PFASO15067 1338 aa10.76□□□□□ -0.69
UBBP4-201ENST00000583708 ZNF536O15090 1300 aa10.76□□□□□ -0.69
UBBP4-201ENST00000583708 ESYT2A0FGR8 921 aa10.75□□□□□ -0.69
UBBP4-201ENST00000583708 PLEKHA8P1O95397 391 aa10.75□□□□□ -0.69
UBBP4-201ENST00000583708 HOXC6P09630 235 aa10.75□□□□□ -0.69
UBBP4-201ENST00000583708 XRCC5P13010 732 aaKnown RBP10.75□□□□□ -0.69
UBBP4-201ENST00000583708 SCG2P13521 617 aa10.75□□□□□ -0.69
UBBP4-201ENST00000583708 RXRAP19793 462 aa10.75□□□□□ -0.69
UBBP4-201ENST00000583708 GNA11P29992 359 aa10.75□□□□□ -0.69
UBBP4-201ENST00000583708 CUL4AQ13619 759 aa10.75□□□□□ -0.69
UBBP4-201ENST00000583708 PLS1Q14651 629 aa10.75□□□□□ -0.69
UBBP4-201ENST00000583708 KCTD2Q14681 263 aa10.75□□□□□ -0.69
UBBP4-201ENST00000583708 PFKFB3Q16875 520 aaPredicted RBP10.75□□□□□ -0.69
UBBP4-201ENST00000583708 Q3C1V9 767 aa10.75□□□□□ -0.69
UBBP4-201ENST00000583708 POTEEQ6S8J3 1075 aa10.75□□□□□ -0.69
UBBP4-201ENST00000583708 NBPF11Q86T75 865 aa10.75□□□□□ -0.69
UBBP4-201ENST00000583708 HSCBQ8IWL3 235 aa10.75□□□□□ -0.69
UBBP4-201ENST00000583708 CCDC144CPQ8IYA2 1237 aa10.75□□□□□ -0.69
UBBP4-201ENST00000583708 CPXCR1Q8N123 301 aa10.75□□□□□ -0.69
UBBP4-201ENST00000583708 MSL3Q8N5Y2 521 aaKnown RBP10.75□□□□□ -0.69
UBBP4-201ENST00000583708 CCDC148Q8NFR7 591 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms