RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 RAET1EQ8TD07 263 aa9.8□□□□□ -0.84
PPP4R1-225ENST00000583438 CLP1Q92989 425 aaKnown RBP9.8□□□□□ -0.84
PPP4R1-225ENST00000583438 DNAJC18Q9H819 358 aa9.8□□□□□ -0.84
PPP4R1-225ENST00000583438 USP3Q9Y6I4 520 aa9.8□□□□□ -0.84
PPP4R1-225ENST00000583438 SPTBN5Q9NRC6 3674 aaKnown RBP9.8□□□□□ -0.84
PPP4R1-225ENST00000583438 CDH23Q9H251 3354 aa9.8□□□□□ -0.84
PPP4R1-225ENST00000583438 A0A0G2JMZ2 1700 aa9.79□□□□□ -0.84
PPP4R1-225ENST00000583438 NAV1Q8NEY1 1877 aa9.79□□□□□ -0.84
PPP4R1-225ENST00000583438 TRIM75PA6NK02 468 aa9.79□□□□□ -0.84
PPP4R1-225ENST00000583438 CXCL11O14625 94 aa9.79□□□□□ -0.84
PPP4R1-225ENST00000583438 SGPL1O95470 568 aa9.79□□□□□ -0.84
PPP4R1-225ENST00000583438 BTDP43251 543 aa9.79□□□□□ -0.84
PPP4R1-225ENST00000583438 PRMT2P55345 433 aa9.79□□□□□ -0.84
PPP4R1-225ENST00000583438 MECOMQ03112 1051 aa9.79□□□□□ -0.84
PPP4R1-225ENST00000583438 PDE4CQ08493 712 aa9.79□□□□□ -0.84
PPP4R1-225ENST00000583438 PICALMQ13492 652 aa9.79□□□□□ -0.84
PPP4R1-225ENST00000583438 KIF22Q14807 665 aa9.79□□□□□ -0.84
PPP4R1-225ENST00000583438 TLR1Q15399 786 aa9.79□□□□□ -0.84
PPP4R1-225ENST00000583438 GADL1Q6ZQY3 521 aa9.79□□□□□ -0.84
PPP4R1-225ENST00000583438 ANKRD13CQ8N6S4 541 aa9.79□□□□□ -0.84
PPP4R1-225ENST00000583438 DPF3Q92784 378 aa9.79□□□□□ -0.84
PPP4R1-225ENST00000583438 PRIMPOLQ96LW4 560 aa9.79□□□□□ -0.84
PPP4R1-225ENST00000583438 PARK7Q99497 189 aaKnown RBP9.79□□□□□ -0.84
PPP4R1-225ENST00000583438 POLMQ9NP87 494 aaPredicted RBP9.79□□□□□ -0.84
PPP4R1-225ENST00000583438 MROH7-TTC4A0A0A0MT08 1334 aa9.79□□□□□ -0.84
PPP4R1-225ENST00000583438 COL11A1P12107 1806 aaPredicted RBP9.78□□□□□ -0.84
PPP4R1-225ENST00000583438 PRMT3O60678 531 aa9.78□□□□□ -0.84
PPP4R1-225ENST00000583438 ENTPD3O75355 529 aa9.78□□□□□ -0.84
PPP4R1-225ENST00000583438 RNF144AP50876 292 aaPredicted RBP9.78□□□□□ -0.84
PPP4R1-225ENST00000583438 FCGRTP55899 365 aa9.78□□□□□ -0.84
PPP4R1-225ENST00000583438 FOXK2Q01167 660 aa9.78□□□□□ -0.84
PPP4R1-225ENST00000583438 TFCP2Q12800 502 aa9.78□□□□□ -0.84
PPP4R1-225ENST00000583438 TBCELQ5QJ74 424 aa9.78□□□□□ -0.84
PPP4R1-225ENST00000583438 ADGRA1Q86SQ6 560 aa9.78□□□□□ -0.84
PPP4R1-225ENST00000583438 ZFP42Q96MM3 310 aa9.78□□□□□ -0.84
PPP4R1-225ENST00000583438 DEFB118Q96PH6 123 aa9.78□□□□□ -0.84
PPP4R1-225ENST00000583438 TSPAN10Q9H1Z9 355 aaPredicted RBP9.78□□□□□ -0.84
PPP4R1-225ENST00000583438 TXNRD2Q9NNW7 524 aa9.78□□□□□ -0.84
PPP4R1-225ENST00000583438 ATP13A2Q9NQ11 1180 aa9.78□□□□□ -0.84
PPP4R1-225ENST00000583438 COPRSQ9NQ92 184 aa9.78□□□□□ -0.84
PPP4R1-225ENST00000583438 HMG20BQ9P0W2 317 aa9.78□□□□□ -0.84
PPP4R1-225ENST00000583438 SCHIP1Q9P0W5 487 aaPredicted RBP9.78□□□□□ -0.84
PPP4R1-225ENST00000583438 STAP2Q9UGK3 403 aa9.78□□□□□ -0.84
PPP4R1-225ENST00000583438 GJD2Q9UKL4 321 aa9.78□□□□□ -0.84
PPP4R1-225ENST00000583438 NOB1Q9ULX3 412 aaKnown RBP9.78□□□□□ -0.84
PPP4R1-225ENST00000583438 COL2A1P02458 1487 aaPredicted RBP9.78□□□□□ -0.84
PPP4R1-225ENST00000583438 MYH8P13535 1937 aa9.78□□□□□ -0.84
PPP4R1-225ENST00000583438 VCANP13611 3396 aa9.77□□□□□ -0.84
PPP4R1-225ENST00000583438 GPR75-ASB3A0A0A6YYF3 556 aa9.77□□□□□ -0.85
PPP4R1-225ENST00000583438 LCE2BO14633 110 aa9.77□□□□□ -0.85
PPP4R1-225ENST00000583438 ANP32CO43423 234 aa9.77□□□□□ -0.85
PPP4R1-225ENST00000583438 OCLNQ16625 522 aa9.77□□□□□ -0.85
PPP4R1-225ENST00000583438 Q7L0L9 218 aa9.77□□□□□ -0.85
PPP4R1-225ENST00000583438 PAWRQ96IZ0 340 aaKnown RBP9.77□□□□□ -0.85
PPP4R1-225ENST00000583438 GRIP2Q9C0E4 1043 aa9.77□□□□□ -0.85
PPP4R1-225ENST00000583438 AGTPBP1Q9UPW5 1226 aa9.77□□□□□ -0.85
PPP4R1-225ENST00000583438 ZNFX1Q9P2E3 1918 aaKnown RBP9.77□□□□□ -0.85
PPP4R1-225ENST00000583438 PFASO15067 1338 aa9.77□□□□□ -0.85
PPP4R1-225ENST00000583438 BAZ2AQ9UIF9 1905 aaKnown RBP9.76□□□□□ -0.85
PPP4R1-225ENST00000583438 PNMA6EA0A0J9YXQ4 647 aa9.76□□□□□ -0.85
PPP4R1-225ENST00000583438 A0A1B0GUL7 405 aa9.76□□□□□ -0.85
PPP4R1-225ENST00000583438 E9PSI1 815 aa9.76□□□□□ -0.85
PPP4R1-225ENST00000583438 UBTFL1P0CB47 393 aaPredicted RBP9.76□□□□□ -0.85
PPP4R1-225ENST00000583438 WEE1P30291 646 aa9.76□□□□□ -0.85
PPP4R1-225ENST00000583438 GPC1P35052 558 aa9.76□□□□□ -0.85
PPP4R1-225ENST00000583438 IL15P40933 162 aaPredicted RBP9.76□□□□□ -0.85
PPP4R1-225ENST00000583438 MCAMP43121 646 aa9.76□□□□□ -0.85
PPP4R1-225ENST00000583438 HMGCS2P54868 508 aa9.76□□□□□ -0.85
PPP4R1-225ENST00000583438 ARHGEF6Q15052 776 aa9.76□□□□□ -0.85
PPP4R1-225ENST00000583438 PHLDB3Q6NSJ2 640 aa9.76□□□□□ -0.85
PPP4R1-225ENST00000583438 TRIB2Q92519 343 aa9.76□□□□□ -0.85
PPP4R1-225ENST00000583438 NSUN4Q96CB9 384 aaKnown RBP9.76□□□□□ -0.85
PPP4R1-225ENST00000583438 HOOK2Q96ED9 719 aa9.76□□□□□ -0.85
PPP4R1-225ENST00000583438 ZSCAN10Q96SZ4 725 aaPredicted RBP9.76□□□□□ -0.85
PPP4R1-225ENST00000583438 GDF15Q99988 308 aa9.76□□□□□ -0.85
PPP4R1-225ENST00000583438 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.76□□□□□ -0.85
PPP4R1-225ENST00000583438 SMC4Q9NTJ3 1288 aa9.76□□□□□ -0.85
PPP4R1-225ENST00000583438 ABCF2Q9UG63 623 aa9.76□□□□□ -0.85
PPP4R1-225ENST00000583438 DENND2AQ9ULE3 1009 aa9.76□□□□□ -0.85
PPP4R1-225ENST00000583438 PDS5AQ29RF7 1337 aaKnown RBP9.76□□□□□ -0.85
PPP4R1-225ENST00000583438 PRUNE2Q8WUY3 3088 aa9.76□□□□□ -0.85
PPP4R1-225ENST00000583438 CDK2AP1O14519 115 aa9.75□□□□□ -0.85
PPP4R1-225ENST00000583438 TNPO2O14787 897 aaKnown RBP9.75□□□□□ -0.85
PPP4R1-225ENST00000583438 CTNND1O60716 968 aaKnown RBP9.75□□□□□ -0.85
PPP4R1-225ENST00000583438 SYN1P17600 705 aa9.75□□□□□ -0.85
PPP4R1-225ENST00000583438 SPP2Q13103 211 aa9.75□□□□□ -0.85
PPP4R1-225ENST00000583438 ALDH1L2Q3SY69 923 aa9.75□□□□□ -0.85
PPP4R1-225ENST00000583438 SLC9A9Q8IVB4 645 aa9.75□□□□□ -0.85
PPP4R1-225ENST00000583438 RNF217Q8TC41 542 aa9.75□□□□□ -0.85
PPP4R1-225ENST00000583438 SH3RF3Q8TEJ3 882 aaPredicted RBP9.75□□□□□ -0.85
PPP4R1-225ENST00000583438 SCG3Q8WXD2 468 aaKnown RBP9.75□□□□□ -0.85
PPP4R1-225ENST00000583438 OSBPL5Q9H0X9 879 aaPredicted RBP9.75□□□□□ -0.85
PPP4R1-225ENST00000583438 ASCC2Q9H1I8 757 aaPredicted RBP9.75□□□□□ -0.85
PPP4R1-225ENST00000583438 PICK1Q9NRD5 415 aa9.75□□□□□ -0.85
PPP4R1-225ENST00000583438 BIN2Q9UBW5 565 aaPredicted RBP9.75□□□□□ -0.85
PPP4R1-225ENST00000583438 ZMYND8Q9ULU4 1186 aaPredicted RBP9.75□□□□□ -0.85
PPP4R1-225ENST00000583438 SLC45A1Q9Y2W3 748 aa9.75□□□□□ -0.85
PPP4R1-225ENST00000583438 SMCHD1A6NHR9 2005 aa9.74□□□□□ -0.85
PPP4R1-225ENST00000583438 ZEB1P37275 1124 aaPredicted RBP9.74□□□□□ -0.85
PPP4R1-225ENST00000583438 UBXN2AP68543 259 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms