RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 PRDM6Q9NQX0 595 aa19.31■□□□□ 0.68
SREBF1-221ENST00000583080 HOMER2Q9NSB8 354 aa19.31■□□□□ 0.68
SREBF1-221ENST00000583080 ECHDC1Q9NTX5 307 aa19.31■□□□□ 0.68
SREBF1-221ENST00000583080 A0A0U1RQG5 324 aaPredicted RBP19.3■□□□□ 0.68
SREBF1-221ENST00000583080 M0R2C6 588 aa19.3■□□□□ 0.68
SREBF1-221ENST00000583080 ACRP10323 421 aa19.3■□□□□ 0.68
SREBF1-221ENST00000583080 GJA9P57773 515 aa19.3■□□□□ 0.68
SREBF1-221ENST00000583080 PPIGQ13427 754 aaKnown RBP eCLIP19.3■□□□□ 0.688e-19■■□□□ 13.9
SREBF1-221ENST00000583080 RASIP1Q5U651 963 aa19.3■□□□□ 0.68
SREBF1-221ENST00000583080 FAM126BQ8IXS8 530 aa19.3■□□□□ 0.68
SREBF1-221ENST00000583080 KBTBD3Q8NAB2 608 aa19.3■□□□□ 0.68
SREBF1-221ENST00000583080 PCSK9Q8NBP7 692 aaKnown RBP19.3■□□□□ 0.68
SREBF1-221ENST00000583080 APPBP2Q92624 585 aa19.3■□□□□ 0.68
SREBF1-221ENST00000583080 PBX4Q9BYU1 374 aa19.3■□□□□ 0.68
SREBF1-221ENST00000583080 ABHD16BQ9H3Z7 469 aa19.3■□□□□ 0.68
SREBF1-221ENST00000583080 CTDP1Q9Y5B0 961 aaPredicted RBP19.3■□□□□ 0.68
SREBF1-221ENST00000583080 ARVCFO00192 962 aa19.29■□□□□ 0.68
SREBF1-221ENST00000583080 GPAA1O43292 621 aa19.29■□□□□ 0.68
SREBF1-221ENST00000583080 TDO2P48775 406 aa19.29■□□□□ 0.68
SREBF1-221ENST00000583080 CNTN2Q02246 1040 aa19.29■□□□□ 0.68
SREBF1-221ENST00000583080 CCDC144CPQ8IYA2 1237 aa19.29■□□□□ 0.68
SREBF1-221ENST00000583080 VTI1AQ96AJ9 217 aa19.29■□□□□ 0.68
SREBF1-221ENST00000583080 MTMR4Q9NYA4 1195 aa19.29■□□□□ 0.68
SREBF1-221ENST00000583080 FEM1BQ9UK73 627 aa19.29■□□□□ 0.68
SREBF1-221ENST00000583080 PLIN4Q96Q06 1357 aa19.29■□□□□ 0.68
SREBF1-221ENST00000583080 ASTN1O14525 1302 aa19.28■□□□□ 0.68
SREBF1-221ENST00000583080 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.28■□□□□ 0.68
SREBF1-221ENST00000583080 PTGS1P23219 599 aa19.28■□□□□ 0.68
SREBF1-221ENST00000583080 BEX3Q00994 111 aa19.28■□□□□ 0.68
SREBF1-221ENST00000583080 GNASQ5JWF2 1037 aa19.28■□□□□ 0.68
SREBF1-221ENST00000583080 C20orf194Q5TEA3 1177 aa19.28■□□□□ 0.68
SREBF1-221ENST00000583080 CHST13Q8NET6 341 aa19.28■□□□□ 0.68
SREBF1-221ENST00000583080 MKL1Q969V6 931 aa19.28■□□□□ 0.68
SREBF1-221ENST00000583080 SPC25Q9HBM1 224 aa19.28■□□□□ 0.68
SREBF1-221ENST00000583080 FBXO40Q9UH90 709 aa19.28■□□□□ 0.68
SREBF1-221ENST00000583080 DDX49Q9Y6V7 483 aaKnown RBP19.28■□□□□ 0.68
SREBF1-221ENST00000583080 RNF113AO15541 343 aaKnown RBP19.27■□□□□ 0.68
SREBF1-221ENST00000583080 TTLL1O95922 423 aa19.27■□□□□ 0.68
SREBF1-221ENST00000583080 CYP2C18P33260 490 aa19.27■□□□□ 0.68
SREBF1-221ENST00000583080 OAZ1P54368 228 aa19.27■□□□□ 0.68
SREBF1-221ENST00000583080 TJAP1Q5JTD0 557 aa19.27■□□□□ 0.68
SREBF1-221ENST00000583080 SLFN13Q68D06 897 aa19.27■□□□□ 0.68
SREBF1-221ENST00000583080 CCDC129Q6ZRS4 1044 aa19.27■□□□□ 0.68
SREBF1-221ENST00000583080 ZNF365Q70YC5 407 aa19.27■□□□□ 0.68
SREBF1-221ENST00000583080 FAM133AQ8N9E0 248 aa19.27■□□□□ 0.68
SREBF1-221ENST00000583080 GMCL1P1Q8NEA9 526 aa19.27■□□□□ 0.68
SREBF1-221ENST00000583080 SYMPKQ92797 1274 aaKnown RBP19.27■□□□□ 0.68
SREBF1-221ENST00000583080 CHMP4CQ96CF2 233 aa19.27■□□□□ 0.68
SREBF1-221ENST00000583080 PRDM12Q9H4Q4 367 aa19.27■□□□□ 0.68
SREBF1-221ENST00000583080 MUC3AQ02505 3323 aa19.27■□□□□ 0.67
SREBF1-221ENST00000583080 UMODL1Q5DID0 1318 aa19.26■□□□□ 0.67
SREBF1-221ENST00000583080 BMP3P12645 472 aa19.26■□□□□ 0.67
SREBF1-221ENST00000583080 PSRC1Q6PGN9 363 aaPredicted RBP19.26■□□□□ 0.67
SREBF1-221ENST00000583080 ZNF444Q8N0Y2 327 aaPredicted RBP19.26■□□□□ 0.67
SREBF1-221ENST00000583080 TMEM199Q8N511 208 aa19.26■□□□□ 0.67
SREBF1-221ENST00000583080 PPM1EQ8WY54 764 aa19.26■□□□□ 0.67
SREBF1-221ENST00000583080 ACAD9Q9H845 621 aa19.26■□□□□ 0.67
SREBF1-221ENST00000583080 A1CFQ9NQ94 594 aaKnown RBP19.26■□□□□ 0.67
SREBF1-221ENST00000583080 CXXC1Q9P0U4 656 aaPredicted RBP19.26■□□□□ 0.67
SREBF1-221ENST00000583080 ISY1Q9ULR0 285 aaKnown RBP19.26■□□□□ 0.67
SREBF1-221ENST00000583080 ZNF536O15090 1300 aa19.25■□□□□ 0.67
SREBF1-221ENST00000583080 CHD9Q3L8U1 2897 aa19.25■□□□□ 0.67
SREBF1-221ENST00000583080 GBF1Q92538 1859 aa19.25■□□□□ 0.67
SREBF1-221ENST00000583080 SOWAHBA6NEL2 793 aa19.25■□□□□ 0.67
SREBF1-221ENST00000583080 TMEM232C9JQI7 657 aa19.25■□□□□ 0.67
SREBF1-221ENST00000583080 CD4P01730 458 aa19.25■□□□□ 0.67
SREBF1-221ENST00000583080 APPP05067 770 aa19.25■□□□□ 0.67
SREBF1-221ENST00000583080 NKX3-2P78367 333 aa19.25■□□□□ 0.67
SREBF1-221ENST00000583080 CCDC174Q6PII3 467 aa19.25■□□□□ 0.67
SREBF1-221ENST00000583080 CXCL17Q6UXB2 119 aa19.25■□□□□ 0.67
SREBF1-221ENST00000583080 RASGRP2Q7LDG7 609 aa19.25■□□□□ 0.67
SREBF1-221ENST00000583080 AGBL1Q96MI9 1066 aa19.25■□□□□ 0.67
SREBF1-221ENST00000583080 SEC62Q99442 399 aaKnown RBP19.25■□□□□ 0.67
SREBF1-221ENST00000583080 CHMP4BQ9H444 224 aaKnown RBP19.25■□□□□ 0.67
SREBF1-221ENST00000583080 RNF146Q9NTX7 359 aa19.25■□□□□ 0.67
SREBF1-221ENST00000583080 SYNPO2Q9UMS6 1093 aa19.25■□□□□ 0.67
SREBF1-221ENST00000583080 LCTP09848 1927 aa19.24■□□□□ 0.67
SREBF1-221ENST00000583080 TLR3O15455 904 aaKnown RBP19.24■□□□□ 0.67
SREBF1-221ENST00000583080 TNFAIP2Q03169 654 aa19.24■□□□□ 0.67
SREBF1-221ENST00000583080 NOL8Q76FK4 1167 aaKnown RBP19.24■□□□□ 0.67
SREBF1-221ENST00000583080 TLK2Q86UE8 772 aa19.24■□□□□ 0.67
SREBF1-221ENST00000583080 IFNL3Q8IZI9 196 aa19.24■□□□□ 0.67
SREBF1-221ENST00000583080 NEDD1Q8NHV4 660 aa19.24■□□□□ 0.67
SREBF1-221ENST00000583080 GAS2L1Q99501 681 aaPredicted RBP19.24■□□□□ 0.67
SREBF1-221ENST00000583080 ZNF287Q9HBT7 754 aa19.24■□□□□ 0.67
SREBF1-221ENST00000583080 IL23AQ9NPF7 189 aa19.24■□□□□ 0.67
SREBF1-221ENST00000583080 GNEQ9Y223 722 aaKnown RBP19.24■□□□□ 0.67
SREBF1-221ENST00000583080 MYO9BQ13459 2157 aa19.23■□□□□ 0.67
SREBF1-221ENST00000583080 ZFYP08048 801 aaPredicted RBP19.23■□□□□ 0.67
SREBF1-221ENST00000583080 TSPY3P0CV98 308 aa19.23■□□□□ 0.67
SREBF1-221ENST00000583080 TSPY8P0CW00 308 aa19.23■□□□□ 0.67
SREBF1-221ENST00000583080 GNAT2P19087 354 aa19.23■□□□□ 0.67
SREBF1-221ENST00000583080 STAT2P52630 851 aa19.23■□□□□ 0.67
SREBF1-221ENST00000583080 ADGRE1Q14246 886 aa19.23■□□□□ 0.67
SREBF1-221ENST00000583080 SLC43A3Q8NBI5 491 aa19.23■□□□□ 0.67
SREBF1-221ENST00000583080 GRIN2DO15399 1336 aa19.23■□□□□ 0.67
SREBF1-221ENST00000583080 SMPD1P17405 629 aa19.22■□□□□ 0.67
SREBF1-221ENST00000583080 SNAP25P60880 206 aa19.22■□□□□ 0.67
SREBF1-221ENST00000583080 FSCN1Q16658 493 aaKnown RBP19.22■□□□□ 0.67
SREBF1-221ENST00000583080 TMEM63BQ5T3F8 832 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 426.4 ms