RNA–Protein interactions for RNA: ENST00000582821.5

GGA3-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 1,018 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-215ENST00000582821 ANKLE1Q8NAG6 615 aa16.38■□□□□ 0.21
GGA3-215ENST00000582821 NCOA7Q8NI08 942 aa16.38■□□□□ 0.21
GGA3-215ENST00000582821 OGDHLQ9ULD0 1010 aa16.38■□□□□ 0.21
GGA3-215ENST00000582821 CDC45O75419 566 aa16.37■□□□□ 0.21
GGA3-215ENST00000582821 PGK2P07205 417 aa16.37■□□□□ 0.21
GGA3-215ENST00000582821 CCND3P30281 292 aaPredicted RBP16.37■□□□□ 0.21
GGA3-215ENST00000582821 CYP2C19P33261 490 aa16.37■□□□□ 0.21
GGA3-215ENST00000582821 SLC16A2P36021 539 aa16.37■□□□□ 0.21
GGA3-215ENST00000582821 LHX8Q68G74 356 aa16.37■□□□□ 0.21
GGA3-215ENST00000582821 CASC1Q6TDU7 716 aa16.37■□□□□ 0.21
GGA3-215ENST00000582821 STOX1Q6ZVD7 989 aa16.37■□□□□ 0.21
GGA3-215ENST00000582821 MSL3Q8N5Y2 521 aaKnown RBP16.37■□□□□ 0.21
GGA3-215ENST00000582821 DDX11Q96FC9 970 aa16.37■□□□□ 0.21
GGA3-215ENST00000582821 AGBL1Q96MI9 1066 aa16.37■□□□□ 0.21
GGA3-215ENST00000582821 GPCPD1Q9NPB8 672 aa16.37■□□□□ 0.21
GGA3-215ENST00000582821 NRBP1Q9UHY1 535 aa16.37■□□□□ 0.21
GGA3-215ENST00000582821 PNMA2Q9UL42 364 aa16.37■□□□□ 0.21
GGA3-215ENST00000582821 TAF6LQ9Y6J9 622 aa16.37■□□□□ 0.21
GGA3-215ENST00000582821 CEP290O15078 2479 aa16.37■□□□□ 0.21
GGA3-215ENST00000582821 MSCO60682 206 aa16.36■□□□□ 0.21
GGA3-215ENST00000582821 ICAM1P05362 532 aa16.36■□□□□ 0.21
GGA3-215ENST00000582821 CYBAP13498 195 aa16.36■□□□□ 0.21
GGA3-215ENST00000582821 IFIT1BQ5T764 474 aaKnown RBP16.36■□□□□ 0.21
GGA3-215ENST00000582821 MAMDC4Q6UXC1 1216 aa16.36■□□□□ 0.21
GGA3-215ENST00000582821 ZNF467Q7Z7K2 595 aaPredicted RBP16.36■□□□□ 0.21
GGA3-215ENST00000582821 RALYLQ86SE5 291 aaKnown RBP16.36■□□□□ 0.21
GGA3-215ENST00000582821 TINF2Q9BSI4 451 aa16.36■□□□□ 0.21
GGA3-215ENST00000582821 MTA3Q9BTC8 594 aa16.36■□□□□ 0.21
GGA3-215ENST00000582821 ACAD9Q9H845 621 aa16.36■□□□□ 0.21
GGA3-215ENST00000582821 FRMPD2Q68DX3 1309 aaPredicted RBP16.36■□□□□ 0.21
GGA3-215ENST00000582821 SLC27A2O14975 620 aa16.35■□□□□ 0.21
GGA3-215ENST00000582821 FARP2O94887 1054 aaPredicted RBP16.35■□□□□ 0.21
GGA3-215ENST00000582821 SLC4A3P48751 1232 aa16.35■□□□□ 0.21
GGA3-215ENST00000582821 ASPRV1Q53RT3 343 aa16.35■□□□□ 0.21
GGA3-215ENST00000582821 MB21D2Q8IYB1 491 aaPredicted RBP16.35■□□□□ 0.21
GGA3-215ENST00000582821 ANKRD35Q8N283 1001 aa16.35■□□□□ 0.21
GGA3-215ENST00000582821 TRPV1Q8NER1 839 aa16.35■□□□□ 0.21
GGA3-215ENST00000582821 TRERF1Q96PN7 1200 aa16.35■□□□□ 0.21
GGA3-215ENST00000582821 ANO2Q9NQ90 1003 aa16.35■□□□□ 0.21
GGA3-215ENST00000582821 RNF146Q9NTX7 359 aa16.35■□□□□ 0.21
GGA3-215ENST00000582821 IFIT3O14879 490 aaKnown RBP16.34■□□□□ 0.21
GGA3-215ENST00000582821 MNX1P50219 401 aaPredicted RBP16.34■□□□□ 0.21
GGA3-215ENST00000582821 SNAP25P60880 206 aa16.34■□□□□ 0.21
GGA3-215ENST00000582821 CREB3L3Q68CJ9 461 aa16.34■□□□□ 0.21
GGA3-215ENST00000582821 CCDC174Q6PII3 467 aa16.34■□□□□ 0.21
GGA3-215ENST00000582821 IGDCC4Q8TDY8 1250 aa16.34■□□□□ 0.21
GGA3-215ENST00000582821 DDX20Q9UHI6 824 aaKnown RBP16.34■□□□□ 0.21
GGA3-215ENST00000582821 CCPG1Q9ULG6 757 aa16.34■□□□□ 0.21
GGA3-215ENST00000582821 ERICH2A1L162 156 aa16.33■□□□□ 0.2
GGA3-215ENST00000582821 SEPT4O43236 478 aa16.33■□□□□ 0.2
GGA3-215ENST00000582821 PARP1P09874 1014 aaKnown RBP16.33■□□□□ 0.2
GGA3-215ENST00000582821 GOLGA8HP0CJ92 632 aa16.33■□□□□ 0.2
GGA3-215ENST00000582821 ALAS1P13196 640 aa16.33■□□□□ 0.2
GGA3-215ENST00000582821 ANTXR2P58335 489 aa16.33■□□□□ 0.2
GGA3-215ENST00000582821 SART3Q15020 963 aaKnown RBP16.33■□□□□ 0.2
GGA3-215ENST00000582821 TSGA10IPQ3SY00 556 aa16.33■□□□□ 0.2
GGA3-215ENST00000582821 FAM133AQ8N9E0 248 aa16.33■□□□□ 0.2
GGA3-215ENST00000582821 UBA5Q9GZZ9 404 aa16.33■□□□□ 0.2
GGA3-215ENST00000582821 A1CFQ9NQ94 594 aaKnown RBP16.33■□□□□ 0.2
GGA3-215ENST00000582821 HOMER2Q9NSB8 354 aa16.33■□□□□ 0.2
GGA3-215ENST00000582821 PFASO15067 1338 aa16.33■□□□□ 0.2
GGA3-215ENST00000582821 WDR19Q8NEZ3 1342 aa16.33■□□□□ 0.2
GGA3-215ENST00000582821 SYNGAP1Q96PV0 1343 aa16.33■□□□□ 0.2
GGA3-215ENST00000582821 MCM3APO60318 1980 aa16.33■□□□□ 0.2
GGA3-215ENST00000582821 CNGA1P29973 690 aa16.32■□□□□ 0.2
GGA3-215ENST00000582821 WTAPQ15007 396 aa16.32■□□□□ 0.2
GGA3-215ENST00000582821 MUM1L1Q5H9M0 696 aa16.32■□□□□ 0.2
GGA3-215ENST00000582821 RNF20Q5VTR2 975 aa16.32■□□□□ 0.2
GGA3-215ENST00000582821 NECAB2Q7Z6G3 386 aa16.32■□□□□ 0.2
GGA3-215ENST00000582821 PAWRQ96IZ0 340 aaKnown RBP16.32■□□□□ 0.2
GGA3-215ENST00000582821 FGD4Q96M96 766 aa16.32■□□□□ 0.2
GGA3-215ENST00000582821 HTATIP2Q9BUP3 242 aa16.32■□□□□ 0.2
GGA3-215ENST00000582821 MAF1Q9H063 256 aa16.32■□□□□ 0.2
GGA3-215ENST00000582821 BAZ2BQ9UIF8 2168 aaKnown RBP16.32■□□□□ 0.2
GGA3-215ENST00000582821 MYH6P13533 1939 aa16.31■□□□□ 0.2
GGA3-215ENST00000582821 FRMPD3Q5JV73 1810 aa16.31■□□□□ 0.2
GGA3-215ENST00000582821 PALM3A6NDB9 673 aaPredicted RBP16.31■□□□□ 0.2
GGA3-215ENST00000582821 POTEB2H3BUK9 544 aa16.31■□□□□ 0.2
GGA3-215ENST00000582821 SNAI1O95863 264 aaPredicted RBP16.31■□□□□ 0.2
GGA3-215ENST00000582821 ZNF865P0CJ78 1059 aaPredicted RBP16.31■□□□□ 0.2
GGA3-215ENST00000582821 MCM5P33992 734 aa16.31■□□□□ 0.2
GGA3-215ENST00000582821 TROAPQ12815 778 aa16.31■□□□□ 0.2
GGA3-215ENST00000582821 PRAMEF19Q5SWL8 479 aa16.31■□□□□ 0.2
GGA3-215ENST00000582821 ADGRF4Q8IZF3 695 aa16.31■□□□□ 0.2
GGA3-215ENST00000582821 TMTC2Q8N394 836 aa16.31■□□□□ 0.2
GGA3-215ENST00000582821 SENP2Q9HC62 589 aa16.31■□□□□ 0.2
GGA3-215ENST00000582821 CYP39A1Q9NYL5 469 aa16.31■□□□□ 0.2
GGA3-215ENST00000582821 TMEM67Q5HYA8 995 aa16.3■□□□□ 0.2
GGA3-215ENST00000582821 PRPF38BQ5VTL8 546 aaKnown RBP16.3■□□□□ 0.2
GGA3-215ENST00000582821 CHST3Q7LGC8 479 aa16.3■□□□□ 0.2
GGA3-215ENST00000582821 STAG2Q8N3U4 1231 aa16.3■□□□□ 0.2
GGA3-215ENST00000582821 RGS22Q8NE09 1264 aa16.3■□□□□ 0.2
GGA3-215ENST00000582821 CLEC4DQ8WXI8 215 aa16.3■□□□□ 0.2
GGA3-215ENST00000582821 TMEM87BQ96K49 555 aa16.3■□□□□ 0.2
GGA3-215ENST00000582821 CPVLQ9H3G5 476 aa16.3■□□□□ 0.2
GGA3-215ENST00000582821 MAD2L2Q9UI95 211 aa16.3■□□□□ 0.2
GGA3-215ENST00000582821 CNPY2Q9Y2B0 182 aa16.3■□□□□ 0.2
GGA3-215ENST00000582821 SOWAHBA6NEL2 793 aa16.29■□□□□ 0.2
GGA3-215ENST00000582821 KLRF2D3W0D1 207 aa16.29■□□□□ 0.2
GGA3-215ENST00000582821 PRC1O43663 620 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms