RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	UBL7	Q96S82	380 aa	Predicted RBP	6.51	□□□□□ -1.37
MSI2-216	ENST00000582772	INCENP	Q9NQS7	918 aa		6.51	□□□□□ -1.37
MSI2-216	ENST00000582772	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	6.51	□□□□□ -1.37
MSI2-216	ENST00000582772	KIF16B	Q96L93	1317 aa		6.5	□□□□□ -1.37
MSI2-216	ENST00000582772	ACACA	Q13085	2346 aa		6.5	□□□□□ -1.37
MSI2-216	ENST00000582772	MYADML2	A6NDP7	307 aa		6.5	□□□□□ -1.37
MSI2-216	ENST00000582772	LINC01565	O15544	149 aa		6.5	□□□□□ -1.37
MSI2-216	ENST00000582772	HTATSF1	O43719	755 aa	Known RBP	6.5	□□□□□ -1.37
MSI2-216	ENST00000582772	TBC1D4	O60343	1298 aa		6.5	□□□□□ -1.37
MSI2-216	ENST00000582772	B4GALT4	O60513	344 aa		6.5	□□□□□ -1.37
MSI2-216	ENST00000582772	LILRB5	O75023	590 aa		6.5	□□□□□ -1.37
MSI2-216	ENST00000582772	PRB1	P04280	392 aa		6.5	□□□□□ -1.37
MSI2-216	ENST00000582772	ZNF865	P0CJ78	1059 aa	Predicted RBP	6.5	□□□□□ -1.37
MSI2-216	ENST00000582772	NDUFV1	P49821	464 aa		6.5	□□□□□ -1.37
MSI2-216	ENST00000582772	GPM6B	Q13491	265 aa		6.5	□□□□□ -1.37
MSI2-216	ENST00000582772	RTL5	Q5HYW3	569 aa	Predicted RBP	6.5	□□□□□ -1.37
MSI2-216	ENST00000582772	HHIPL2	Q6UWX4	724 aa		6.5	□□□□□ -1.37
MSI2-216	ENST00000582772	CCDC84	Q86UT8	332 aa	Predicted RBP	6.5	□□□□□ -1.37
MSI2-216	ENST00000582772	ZBTB44	Q8NCP5	570 aa		6.5	□□□□□ -1.37
MSI2-216	ENST00000582772	PLBD2	Q8NHP8	589 aa		6.5	□□□□□ -1.37
MSI2-216	ENST00000582772	PNISR	Q8TF01	805 aa	Known RBP	6.5	□□□□□ -1.37
MSI2-216	ENST00000582772	RIN2	Q8WYP3	895 aa	Predicted RBP	6.5	□□□□□ -1.37
MSI2-216	ENST00000582772	MAML3	Q96JK9	1138 aa		6.5	□□□□□ -1.37
MSI2-216	ENST00000582772	PAGR1	Q9BTK6	254 aa		6.5	□□□□□ -1.37
MSI2-216	ENST00000582772	ZBED2	Q9BTP6	218 aa		6.5	□□□□□ -1.37
MSI2-216	ENST00000582772	UPF3A	Q9H1J1	476 aa	Known RBP	6.5	□□□□□ -1.37
MSI2-216	ENST00000582772	SLC5A4	Q9NY91	659 aa		6.5	□□□□□ -1.37
MSI2-216	ENST00000582772	LRRFIP2	Q9Y608	721 aa	Known RBP	6.5	□□□□□ -1.37
MSI2-216	ENST00000582772	ATM	Q13315	3056 aa		6.5	□□□□□ -1.37
MSI2-216	ENST00000582772	FAM221B	A6H8Z2	402 aa		6.49	□□□□□ -1.37
MSI2-216	ENST00000582772	PITPNM1	O00562	1244 aa		6.49	□□□□□ -1.37
MSI2-216	ENST00000582772	COBL	O75128	1261 aa		6.49	□□□□□ -1.37
MSI2-216	ENST00000582772	DUSP11	O75319	330 aa	Known RBP	6.49	□□□□□ -1.37
MSI2-216	ENST00000582772	MAF	O75444	373 aa	Predicted RBP	6.49	□□□□□ -1.37
MSI2-216	ENST00000582772	KCNK5	O95279	499 aa		6.49	□□□□□ -1.37
MSI2-216	ENST00000582772	CTSW	P56202	376 aa		6.49	□□□□□ -1.37
MSI2-216	ENST00000582772	HTRA4	P83105	476 aa	Predicted RBP	6.49	□□□□□ -1.37
MSI2-216	ENST00000582772	TBC1D8B	Q0IIM8	1120 aa		6.49	□□□□□ -1.37
MSI2-216	ENST00000582772	IL31	Q6EBC2	164 aa		6.49	□□□□□ -1.37
MSI2-216	ENST00000582772	C19orf48	Q6RUI8	117 aa		6.49	□□□□□ -1.37
MSI2-216	ENST00000582772	DEFB128	Q7Z7B8	93 aa		6.49	□□□□□ -1.37
MSI2-216	ENST00000582772	C1orf210	Q8IVY1	113 aa		6.49	□□□□□ -1.37
MSI2-216	ENST00000582772	ABRA	Q8N0Z2	381 aa		6.49	□□□□□ -1.37
MSI2-216	ENST00000582772	ZNF843	Q8N446	348 aa		6.49	□□□□□ -1.37
MSI2-216	ENST00000582772	EFHB	Q8N7U6	833 aa		6.49	□□□□□ -1.37
MSI2-216	ENST00000582772	NELL1	Q92832	810 aa		6.49	□□□□□ -1.37
MSI2-216	ENST00000582772	LENG1	Q96BZ8	264 aa	Predicted RBP	6.49	□□□□□ -1.37
MSI2-216	ENST00000582772	SCUBE2	Q9NQ36	999 aa		6.49	□□□□□ -1.37
MSI2-216	ENST00000582772	DLGAP2	Q9P1A6	1054 aa		6.49	□□□□□ -1.37
MSI2-216	ENST00000582772	FAM198A	Q9UFP1	575 aa		6.49	□□□□□ -1.37
MSI2-216	ENST00000582772	GMEB2	Q9UKD1	530 aa		6.49	□□□□□ -1.37
MSI2-216	ENST00000582772	INSL6	Q9Y581	213 aa		6.49	□□□□□ -1.37
MSI2-216	ENST00000582772	NDUFB9	Q9Y6M9	179 aa		6.49	□□□□□ -1.37
MSI2-216	ENST00000582772	PCNX1	Q96RV3	2341 aa		6.49	□□□□□ -1.37
MSI2-216	ENST00000582772	MIA3	Q5JRA6	1907 aa		6.48	□□□□□ -1.37
MSI2-216	ENST00000582772	DLG5	Q8TDM6	1919 aa		6.48	□□□□□ -1.37
MSI2-216	ENST00000582772	PTPRQ	Q9UMZ3	2332 aa		6.48	□□□□□ -1.37
MSI2-216	ENST00000582772	SPEN	Q96T58	3664 aa	Known RBP	6.48	□□□□□ -1.37
MSI2-216	ENST00000582772	C5orf67	F2Z3F1	127 aa		6.48	□□□□□ -1.37
MSI2-216	ENST00000582772	TBC1D12	O60347	775 aa		6.48	□□□□□ -1.37
MSI2-216	ENST00000582772	PCCA	P05165	728 aa	Predicted RBP	6.48	□□□□□ -1.37
MSI2-216	ENST00000582772	KCNJ4	P48050	445 aa		6.48	□□□□□ -1.37
MSI2-216	ENST00000582772	BACE1	P56817	501 aa		6.48	□□□□□ -1.37
MSI2-216	ENST00000582772	DEFB103A	P81534	67 aa		6.48	□□□□□ -1.37
MSI2-216	ENST00000582772	KCNC4	Q03721	635 aa		6.48	□□□□□ -1.37
MSI2-216	ENST00000582772	NFIA	Q12857	509 aa		6.48	□□□□□ -1.37
MSI2-216	ENST00000582772	GRIK5	Q16478	980 aa		6.48	□□□□□ -1.37
MSI2-216	ENST00000582772	CSRP2	Q16527	193 aa		6.48	□□□□□ -1.37
MSI2-216	ENST00000582772	PRR23C	Q6ZRP0	262 aa		6.48	□□□□□ -1.37
MSI2-216	ENST00000582772	MCM10	Q7L590	875 aa		6.48	□□□□□ -1.37
MSI2-216	ENST00000582772	MAML2	Q8IZL2	1156 aa	Predicted RBP	6.48	□□□□□ -1.37
MSI2-216	ENST00000582772	SLC39A7	Q92504	469 aa		6.48	□□□□□ -1.37
MSI2-216	ENST00000582772	ZNF428	Q96B54	188 aa		6.48	□□□□□ -1.37
MSI2-216	ENST00000582772	WDR18	Q9BV38	432 aa		6.48	□□□□□ -1.37
MSI2-216	ENST00000582772	OSBPL5	Q9H0X9	879 aa	Predicted RBP	6.48	□□□□□ -1.37
MSI2-216	ENST00000582772	SMOC2	Q9H3U7	446 aa		6.48	□□□□□ -1.37
MSI2-216	ENST00000582772	FBXO4	Q9UKT5	387 aa		6.48	□□□□□ -1.37
MSI2-216	ENST00000582772	TIMELESS	Q9UNS1	1208 aa		6.48	□□□□□ -1.37
MSI2-216	ENST00000582772	SUGT1	Q9Y2Z0	365 aa		6.48	□□□□□ -1.37
MSI2-216	ENST00000582772	NEUROG3	Q9Y4Z2	214 aa		6.48	□□□□□ -1.37
MSI2-216	ENST00000582772	CAPN8	A6NHC0	703 aa		6.47	□□□□□ -1.37
MSI2-216	ENST00000582772	ATP5J2-PTCD1	G3V325	749 aa		6.47	□□□□□ -1.37
MSI2-216	ENST00000582772	ATXN7	O15265	892 aa	Predicted RBP	6.47	□□□□□ -1.37
MSI2-216	ENST00000582772	CABYR	O75952	493 aa		6.47	□□□□□ -1.37
MSI2-216	ENST00000582772	GLP2R	O95838	553 aa		6.47	□□□□□ -1.37
MSI2-216	ENST00000582772	ANXA1	P04083	346 aa		6.47	□□□□□ -1.37
MSI2-216	ENST00000582772	GTF2F1	P35269	517 aa	Known RBP eCLIP	6.47	□□□□□ -1.37	2e-6	■■■■□ 23.1
MSI2-216	ENST00000582772	GJA9	P57773	515 aa		6.47	□□□□□ -1.37
MSI2-216	ENST00000582772	TCP10	Q12799	353 aa		6.47	□□□□□ -1.37
MSI2-216	ENST00000582772	TMCO2	Q7Z6W1	182 aa	Predicted RBP	6.47	□□□□□ -1.37
MSI2-216	ENST00000582772	FBXO11	Q86XK2	927 aa		6.47	□□□□□ -1.37
MSI2-216	ENST00000582772	SHCBP1	Q8NEM2	672 aa		6.47	□□□□□ -1.37
MSI2-216	ENST00000582772	TTLL11	Q8NHH1	800 aa		6.47	□□□□□ -1.37
MSI2-216	ENST00000582772	TBC1D22A	Q8WUA7	517 aa		6.47	□□□□□ -1.37
MSI2-216	ENST00000582772	RTF1	Q92541	710 aa	Known RBP	6.47	□□□□□ -1.37
MSI2-216	ENST00000582772	CCDC85A	Q96PX6	553 aa	Predicted RBP	6.47	□□□□□ -1.37
MSI2-216	ENST00000582772	RSPH6A	Q9H0K4	717 aa		6.47	□□□□□ -1.37
MSI2-216	ENST00000582772	SIL1	Q9H173	461 aa		6.47	□□□□□ -1.37
MSI2-216	ENST00000582772	TRPV6	Q9H1D0	765 aa		6.47	□□□□□ -1.37
MSI2-216	ENST00000582772	AS3MT	Q9HBK9	375 aa		6.47	□□□□□ -1.37

Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms