RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 TXLNAP40222 546 aa25.74■■□□□ 1.71
CCDC47-204ENST00000582252 FOXP4Q8IVH2 680 aaPredicted RBP25.74■■□□□ 1.71
CCDC47-204ENST00000582252 PDILTQ8N807 584 aa25.74■■□□□ 1.71
CCDC47-204ENST00000582252 TTC12Q9H892 705 aaPredicted RBP25.74■■□□□ 1.71
CCDC47-204ENST00000582252 GPRC5DQ9NZD1 345 aa25.74■■□□□ 1.71
CCDC47-204ENST00000582252 ATRNL1Q5VV63 1379 aa25.74■■□□□ 1.71
CCDC47-204ENST00000582252 CLRN2A0PK11 232 aa25.74■■□□□ 1.71
CCDC47-204ENST00000582252 TCP10Q12799 353 aa25.74■■□□□ 1.71
CCDC47-204ENST00000582252 ZSCAN29Q8IWY8 852 aaPredicted RBP25.74■■□□□ 1.71
CCDC47-204ENST00000582252 DHX58Q96C10 678 aa25.74■■□□□ 1.71
CCDC47-204ENST00000582252 SMCO2A6NFE2 343 aa25.73■■□□□ 1.71
CCDC47-204ENST00000582252 MYL5Q02045 173 aa25.73■■□□□ 1.71
CCDC47-204ENST00000582252 MLKLQ8NB16 471 aa25.73■■□□□ 1.71
CCDC47-204ENST00000582252 PIGSQ96S52 555 aa25.73■■□□□ 1.71
CCDC47-204ENST00000582252 ZNF543Q08ER8 600 aa25.72■■□□□ 1.71
CCDC47-204ENST00000582252 ORC2Q13416 577 aaPredicted RBP25.72■■□□□ 1.71
CCDC47-204ENST00000582252 NONOQ15233 471 aaKnown RBP eCLIP25.72■■□□□ 1.71
CCDC47-204ENST00000582252 NBPF9Q3BBW0 867 aa25.72■■□□□ 1.71
CCDC47-204ENST00000582252 PPP1R18Q6NYC8 613 aa25.72■■□□□ 1.71
CCDC47-204ENST00000582252 EPSTI1Q96J88 318 aa25.72■■□□□ 1.71
CCDC47-204ENST00000582252 VAT1LQ9HCJ6 419 aa25.72■■□□□ 1.71
CCDC47-204ENST00000582252 FRMPD2Q68DX3 1309 aaPredicted RBP25.72■■□□□ 1.71
CCDC47-204ENST00000582252 SARSP49591 514 aaKnown RBP25.71■■□□□ 1.71
CCDC47-204ENST00000582252 KIF4BQ2VIQ3 1234 aa25.71■■□□□ 1.71
CCDC47-204ENST00000582252 CERKLQ49MI3 558 aaPredicted RBP25.71■■□□□ 1.71
CCDC47-204ENST00000582252 ISM2Q6H9L7 571 aa25.71■■□□□ 1.71
CCDC47-204ENST00000582252 USP49Q70CQ1 688 aa25.71■■□□□ 1.71
CCDC47-204ENST00000582252 RASGRP2Q7LDG7 609 aa25.71■■□□□ 1.71
CCDC47-204ENST00000582252 ZFPM1Q8IX07 1006 aa25.71■■□□□ 1.71
CCDC47-204ENST00000582252 IQUBQ8NA54 791 aa25.71■■□□□ 1.71
CCDC47-204ENST00000582252 RASGRP4Q8TDF6 673 aa25.71■■□□□ 1.71
CCDC47-204ENST00000582252 ZNF830Q96NB3 372 aaPredicted RBP25.71■■□□□ 1.71
CCDC47-204ENST00000582252 VEZTQ9HBM0 779 aa25.71■■□□□ 1.71
CCDC47-204ENST00000582252 MAN1B1Q9UKM7 699 aa25.71■■□□□ 1.71
CCDC47-204ENST00000582252 OFD1O75665 1012 aa25.71■■□□□ 1.71
CCDC47-204ENST00000582252 CT47A1Q5JQC4 288 aaPredicted RBP25.71■■□□□ 1.71
CCDC47-204ENST00000582252 RBM26Q5T8P6 1007 aaKnown RBP25.71■■□□□ 1.71
CCDC47-204ENST00000582252 FAM83AQ86UY5 434 aa25.71■■□□□ 1.71
CCDC47-204ENST00000582252 FAM151AQ8WW52 585 aa25.71■■□□□ 1.71
CCDC47-204ENST00000582252 UBA5Q9GZZ9 404 aa25.71■■□□□ 1.71
CCDC47-204ENST00000582252 TCP10L2B9ZVM9 353 aa25.7■■□□□ 1.7
CCDC47-204ENST00000582252 PRPHP41219 470 aa25.7■■□□□ 1.7
CCDC47-204ENST00000582252 DHX8Q14562 1220 aaKnown RBP25.7■■□□□ 1.7
CCDC47-204ENST00000582252 INF2Q27J81 1249 aa25.7■■□□□ 1.7
CCDC47-204ENST00000582252 TBC1D10BQ4KMP7 808 aaPredicted RBP25.7■■□□□ 1.7
CCDC47-204ENST00000582252 DTHD1Q6ZMT9 781 aa25.7■■□□□ 1.7
CCDC47-204ENST00000582252 CCDC186Q7Z3E2 898 aa25.7■■□□□ 1.7
CCDC47-204ENST00000582252 SAMD7Q7Z3H4 446 aa25.7■■□□□ 1.7
CCDC47-204ENST00000582252 CPVLQ9H3G5 476 aa25.7■■□□□ 1.7
CCDC47-204ENST00000582252 KANSL2Q9H9L4 492 aa25.7■■□□□ 1.7
CCDC47-204ENST00000582252 NYAP2Q9P242 653 aa25.7■■□□□ 1.7
CCDC47-204ENST00000582252 DDTLA6NHG4 134 aaPredicted RBP25.69■■□□□ 1.7
CCDC47-204ENST00000582252 ADAMTS3O15072 1205 aa25.69■■□□□ 1.7
CCDC47-204ENST00000582252 FOXN1O15353 648 aa25.69■■□□□ 1.7
CCDC47-204ENST00000582252 NEMFO60524 1076 aa25.69■■□□□ 1.7
CCDC47-204ENST00000582252 DDNO94850 711 aaPredicted RBP25.69■■□□□ 1.7
CCDC47-204ENST00000582252 EGFRP00533 1210 aa25.69■■□□□ 1.7
CCDC47-204ENST00000582252 NCAPHQ15003 741 aa25.69■■□□□ 1.7
CCDC47-204ENST00000582252 C4orf32Q8N8J7 132 aa25.69■■□□□ 1.7
CCDC47-204ENST00000582252 SPATA20Q8TB22 786 aa25.69■■□□□ 1.7
CCDC47-204ENST00000582252 PRR29P0C7W0 189 aa25.68■■□□□ 1.7
CCDC47-204ENST00000582252 PTGS1P23219 599 aa25.68■■□□□ 1.7
CCDC47-204ENST00000582252 LMOD1P29536 600 aaPredicted RBP25.68■■□□□ 1.7
CCDC47-204ENST00000582252 TNNI2P48788 182 aa25.68■■□□□ 1.7
CCDC47-204ENST00000582252 ATP2B2Q01814 1243 aa25.68■■□□□ 1.7
CCDC47-204ENST00000582252 TNFAIP1Q13829 316 aa25.68■■□□□ 1.7
CCDC47-204ENST00000582252 MORC3Q14149 939 aa25.68■■□□□ 1.7
CCDC47-204ENST00000582252 CCDC96Q2M329 555 aa25.68■■□□□ 1.7
CCDC47-204ENST00000582252 DPY19L2Q6NUT2 758 aa25.68■■□□□ 1.7
CCDC47-204ENST00000582252 SH3BP5LQ7L8J4 393 aa25.68■■□□□ 1.7
CCDC47-204ENST00000582252 SH3RF1Q7Z6J0 888 aa25.68■■□□□ 1.7
CCDC47-204ENST00000582252 REXO1Q8N1G1 1221 aaKnown RBP25.68■■□□□ 1.7
CCDC47-204ENST00000582252 GPCPD1Q9NPB8 672 aa25.68■■□□□ 1.7
CCDC47-204ENST00000582252 PNMA6FA0A0J9YX94 578 aa25.68■■□□□ 1.7
CCDC47-204ENST00000582252 TATDN1Q6P1N9 297 aa25.68■■□□□ 1.7
CCDC47-204ENST00000582252 TMEM179Q6ZVK1 233 aa25.68■■□□□ 1.7
CCDC47-204ENST00000582252 DCAF4Q8WV16 495 aa25.68■■□□□ 1.7
CCDC47-204ENST00000582252 MKL1Q969V6 931 aa25.68■■□□□ 1.7
CCDC47-204ENST00000582252 PAGE5Q96GU1 130 aa25.68■■□□□ 1.7
CCDC47-204ENST00000582252 DNAJC18Q9H819 358 aa25.68■■□□□ 1.7
CCDC47-204ENST00000582252 CNTNAP1P78357 1384 aa25.67■■□□□ 1.7
CCDC47-204ENST00000582252 A0A087X0B3 334 aa25.67■■□□□ 1.7
CCDC47-204ENST00000582252 CBFA2T2O43439 604 aa25.67■■□□□ 1.7
CCDC47-204ENST00000582252 ADCY7P51828 1080 aa25.67■■□□□ 1.7
CCDC47-204ENST00000582252 NEK8Q86SG6 692 aa25.67■■□□□ 1.7
CCDC47-204ENST00000582252 GSDMAQ96QA5 445 aa25.67■■□□□ 1.7
CCDC47-204ENST00000582252 KCNF1Q9H3M0 494 aa25.67■■□□□ 1.7
CCDC47-204ENST00000582252 IMPACTQ9P2X3 320 aa25.67■■□□□ 1.7
CCDC47-204ENST00000582252 GSDMDP57764 484 aa25.66■■□□□ 1.7
CCDC47-204ENST00000582252 CLEC10AQ8IUN9 316 aa25.66■■□□□ 1.7
CCDC47-204ENST00000582252 CSRNP1Q96S65 589 aa25.66■■□□□ 1.7
CCDC47-204ENST00000582252 SCN4AP35499 1836 aa25.65■■□□□ 1.7
CCDC47-204ENST00000582252 GRAMD1CQ8IYS0 662 aa25.65■■□□□ 1.7
CCDC47-204ENST00000582252 ADGRF4Q8IZF3 695 aa25.65■■□□□ 1.7
CCDC47-204ENST00000582252 AK8Q96MA6 479 aa25.65■■□□□ 1.7
CCDC47-204ENST00000582252 POLR2AP24928 1970 aaKnown RBP25.65■■□□□ 1.7
CCDC47-204ENST00000582252 EPS15P42566 896 aa25.64■■□□□ 1.7
CCDC47-204ENST00000582252 AFMP43652 599 aa25.64■■□□□ 1.7
CCDC47-204ENST00000582252 NOLC1Q14978 699 aaKnown RBP eCLIP25.64■■□□□ 1.7
CCDC47-204ENST00000582252 E2F4Q16254 413 aa25.64■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms