RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	C1orf53	Q5VUE5	145 aa		13.8	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	CCDC174	Q6PII3	467 aa		13.8	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	MAMDC4	Q6UXC1	1216 aa		13.8	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	ARMCX2	Q7L311	632 aa		13.8	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	MSL3	Q8N5Y2	521 aa	Known RBP	13.8	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	CHST13	Q8NET6	341 aa		13.8	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	GUCD1	Q96NT3	240 aa		13.8	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	STARD7	Q9NQZ5	370 aa		13.8	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	DDX49	Q9Y6V7	483 aa	Known RBP	13.8	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	SALL3	Q9BXA9	1300 aa		13.8	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	RANBP6	O60518	1105 aa	Known RBP	13.79	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	C6orf222	P0C671	652 aa	Predicted RBP	13.79	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	RAG1	P15918	1043 aa		13.79	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	EPHB4	P54760	987 aa		13.79	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	CCDC144B	Q3MJ40	725 aa		13.79	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	ZNF697	Q5TEC3	545 aa		13.79	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	CCDC144CP	Q8IYA2	1237 aa		13.79	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	KLHDC9	Q8NEP7	349 aa		13.79	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	STAG1	Q8WVM7	1258 aa		13.79	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	VTI1A	Q96AJ9	217 aa		13.79	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	FAM227B	Q96M60	508 aa		13.79	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	ACAD9	Q9H845	621 aa		13.79	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	IL17RB	Q9NRM6	502 aa		13.79	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	TOMM22	Q9NS69	142 aa		13.79	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	RNF146	Q9NTX7	359 aa		13.79	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	TMEM39A	Q9NV64	488 aa		13.79	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	FBXO40	Q9UH90	709 aa		13.79	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	SYNPO2	Q9UMS6	1093 aa		13.79	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	13.79	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114		A0A0C4DFX4	3053 aa		13.78	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	DUSP11	O75319	330 aa	Known RBP	13.78	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	ALAS1	P13196	640 aa		13.78	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	PTGS1	P23219	599 aa		13.78	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	OAZ1	P54368	228 aa		13.78	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	FAAP100	Q0VG06	881 aa		13.78	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	CCDC96	Q2M329	555 aa		13.78	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	RRP12	Q5JTH9	1297 aa	Known RBP	13.78	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	ZNF467	Q7Z7K2	595 aa	Predicted RBP	13.78	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	FAM160B2	Q86V87	743 aa		13.78	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	CHURC1	Q8WUH1	139 aa		13.78	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	NUP133	Q8WUM0	1156 aa		13.78	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	EVI5L	Q96CN4	794 aa		13.78	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	GMCL1	Q96IK5	515 aa		13.78	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	TRERF1	Q96PN7	1200 aa		13.78	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	TSEN34	Q9BSV6	310 aa	Known RBP	13.78	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	ABHD16B	Q9H3Z7	469 aa		13.78	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114	ZNF536	O15090	1300 aa		13.78	□□□□□ -0.2
CDK5RAP3-223	ENST00000582114		A0A0D9SFI3	127 aa		13.77	□□□□□ -0.21
CDK5RAP3-223	ENST00000582114	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	13.77	□□□□□ -0.21
CDK5RAP3-223	ENST00000582114	MOXD2P	A6NHM9	499 aa		13.77	□□□□□ -0.21
CDK5RAP3-223	ENST00000582114	ASGR1	P07306	291 aa		13.77	□□□□□ -0.21
CDK5RAP3-223	ENST00000582114	PDE1A	P54750	535 aa		13.77	□□□□□ -0.21
CDK5RAP3-223	ENST00000582114	MUM1L1	Q5H9M0	696 aa		13.77	□□□□□ -0.21
CDK5RAP3-223	ENST00000582114	EYS	Q5T1H1	3165 aa		13.77	□□□□□ -0.21
CDK5RAP3-223	ENST00000582114	CCSAP	Q6IQ19	270 aa	Predicted RBP	13.77	□□□□□ -0.21
CDK5RAP3-223	ENST00000582114	NOL8	Q76FK4	1167 aa	Known RBP	13.77	□□□□□ -0.21
CDK5RAP3-223	ENST00000582114	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
CDK5RAP3-223	ENST00000582114	RNPC3	Q96LT9	517 aa	Known RBP	13.77	□□□□□ -0.21
CDK5RAP3-223	ENST00000582114	A1CF	Q9NQ94	594 aa	Known RBP	13.77	□□□□□ -0.21
CDK5RAP3-223	ENST00000582114	PRR12	Q9ULL5	1215 aa		13.77	□□□□□ -0.21
CDK5RAP3-223	ENST00000582114	UNC80	Q8N2C7	3258 aa		13.76	□□□□□ -0.21
CDK5RAP3-223	ENST00000582114	FRMPD2	Q68DX3	1309 aa	Predicted RBP	13.76	□□□□□ -0.21
CDK5RAP3-223	ENST00000582114	SOWAHB	A6NEL2	793 aa		13.76	□□□□□ -0.21
CDK5RAP3-223	ENST00000582114	DCDC2C	A8MYV0	355 aa		13.76	□□□□□ -0.21
CDK5RAP3-223	ENST00000582114	KIAA0355	O15063	1070 aa		13.76	□□□□□ -0.21
CDK5RAP3-223	ENST00000582114	SLC16A2	P36021	539 aa		13.76	□□□□□ -0.21
CDK5RAP3-223	ENST00000582114	HAND2	P61296	217 aa		13.76	□□□□□ -0.21
CDK5RAP3-223	ENST00000582114	BEX3	Q00994	111 aa		13.76	□□□□□ -0.21
CDK5RAP3-223	ENST00000582114	GNAS	Q5JWF2	1037 aa		13.76	□□□□□ -0.21
CDK5RAP3-223	ENST00000582114	FAM109B	Q6ICB4	259 aa	Predicted RBP	13.76	□□□□□ -0.21
CDK5RAP3-223	ENST00000582114	TTBK2	Q6IQ55	1244 aa		13.76	□□□□□ -0.21
CDK5RAP3-223	ENST00000582114	RCSD1	Q6JBY9	416 aa		13.76	□□□□□ -0.21
CDK5RAP3-223	ENST00000582114	EEPD1	Q7L9B9	569 aa		13.76	□□□□□ -0.21
CDK5RAP3-223	ENST00000582114	ANKRD33	Q7Z3H0	272 aa		13.76	□□□□□ -0.21
CDK5RAP3-223	ENST00000582114	FAM133A	Q8N9E0	248 aa		13.76	□□□□□ -0.21
CDK5RAP3-223	ENST00000582114	GLT1D1	Q96MS3	346 aa		13.76	□□□□□ -0.21
CDK5RAP3-223	ENST00000582114	YTHDC1	Q96MU7	727 aa	Known RBP	13.76	□□□□□ -0.21
CDK5RAP3-223	ENST00000582114	PURB	Q96QR8	312 aa	Known RBP	13.76	□□□□□ -0.21
CDK5RAP3-223	ENST00000582114	LNPK	Q9C0E8	428 aa		13.76	□□□□□ -0.21
CDK5RAP3-223	ENST00000582114	KATNBL1	Q9H079	304 aa		13.76	□□□□□ -0.21
CDK5RAP3-223	ENST00000582114	SPC25	Q9HBM1	224 aa		13.76	□□□□□ -0.21
CDK5RAP3-223	ENST00000582114	ASTN1	O14525	1302 aa		13.75	□□□□□ -0.21
CDK5RAP3-223	ENST00000582114	TRIM6-TRIM34	B2RNG4	842 aa		13.75	□□□□□ -0.21
CDK5RAP3-223	ENST00000582114	FDX1	P10109	184 aa		13.75	□□□□□ -0.21
CDK5RAP3-223	ENST00000582114	CST5	P28325	142 aa	Predicted RBP	13.75	□□□□□ -0.21
CDK5RAP3-223	ENST00000582114	GJA9	P57773	515 aa		13.75	□□□□□ -0.21
CDK5RAP3-223	ENST00000582114	FPGS	Q05932	587 aa		13.75	□□□□□ -0.21
CDK5RAP3-223	ENST00000582114	PPP4R3B	Q5MIZ7	849 aa		13.75	□□□□□ -0.21
CDK5RAP3-223	ENST00000582114	B4GALNT3	Q6L9W6	998 aa		13.75	□□□□□ -0.21
CDK5RAP3-223	ENST00000582114	NSMF	Q6X4W1	530 aa		13.75	□□□□□ -0.21
CDK5RAP3-223	ENST00000582114	ZNF589	Q86UQ0	364 aa	Predicted RBP	13.75	□□□□□ -0.21
CDK5RAP3-223	ENST00000582114	RILPL2	Q969X0	211 aa		13.75	□□□□□ -0.21
CDK5RAP3-223	ENST00000582114	CDX2	Q99626	313 aa	Predicted RBP	13.75	□□□□□ -0.21
CDK5RAP3-223	ENST00000582114	UPF3A	Q9H1J1	476 aa	Known RBP	13.75	□□□□□ -0.21
CDK5RAP3-223	ENST00000582114	SEMA6B	Q9H3T3	888 aa		13.75	□□□□□ -0.21
CDK5RAP3-223	ENST00000582114	HELLS	Q9NRZ9	838 aa		13.75	□□□□□ -0.21
CDK5RAP3-223	ENST00000582114	ANAPC4	Q9UJX5	808 aa		13.75	□□□□□ -0.21
CDK5RAP3-223	ENST00000582114	CCPG1	Q9ULG6	757 aa		13.75	□□□□□ -0.21
CDK5RAP3-223	ENST00000582114	CDH23	Q9H251	3354 aa		13.75	□□□□□ -0.21
CDK5RAP3-223	ENST00000582114	FGA	P02671	866 aa		13.74	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 17 ms