RNA–Protein interactions for RNA: ENST00000581709.1

RTTN-208, Transcript of rotatin, humanhuman

TSL 3

Gene RTTN, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-208ENST00000581709 GOLGA8BA8MQT2 603 aa10.37□□□□□ -0.75
RTTN-208ENST00000581709 ICAM1P05362 532 aa10.37□□□□□ -0.75
RTTN-208ENST00000581709 FCER1AP12319 257 aa10.37□□□□□ -0.75
RTTN-208ENST00000581709 ERCC3P19447 782 aa10.37□□□□□ -0.75
RTTN-208ENST00000581709 RXRAP19793 462 aa10.37□□□□□ -0.75
RTTN-208ENST00000581709 PDIA3P30101 505 aaKnown RBP10.37□□□□□ -0.75
RTTN-208ENST00000581709 METAP2P50579 478 aaKnown RBP eCLIP10.37□□□□□ -0.75
RTTN-208ENST00000581709 PRMT2P55345 433 aa10.37□□□□□ -0.75
RTTN-208ENST00000581709 SNAP25P60880 206 aa10.37□□□□□ -0.75
RTTN-208ENST00000581709 TOB2Q14106 344 aaPredicted RBP10.37□□□□□ -0.75
RTTN-208ENST00000581709 RTN1Q16799 776 aa10.37□□□□□ -0.75
RTTN-208ENST00000581709 TKFCQ3LXA3 575 aa10.37□□□□□ -0.75
RTTN-208ENST00000581709 SNRNP48Q6IEG0 339 aaKnown RBP10.37□□□□□ -0.75
RTTN-208ENST00000581709 CTU1Q7Z7A3 348 aaKnown RBP10.37□□□□□ -0.75
RTTN-208ENST00000581709 CHST13Q8NET6 341 aa10.37□□□□□ -0.75
RTTN-208ENST00000581709 REPS2Q8NFH8 660 aa10.37□□□□□ -0.75
RTTN-208ENST00000581709 TRIM47Q96LD4 638 aa10.37□□□□□ -0.75
RTTN-208ENST00000581709 AGBL1Q96MI9 1066 aa10.37□□□□□ -0.75
RTTN-208ENST00000581709 TBC1D32Q96NH3 1257 aa10.37□□□□□ -0.75
RTTN-208ENST00000581709 ARHGAP39Q9C0H5 1083 aa10.37□□□□□ -0.75
RTTN-208ENST00000581709 PORCNQ9H237 461 aa10.37□□□□□ -0.75
RTTN-208ENST00000581709 RANBP17Q9H2T7 1088 aaKnown RBP10.37□□□□□ -0.75
RTTN-208ENST00000581709 JMJD4Q9H9V9 463 aa10.37□□□□□ -0.75
RTTN-208ENST00000581709 FBXO40Q9UH90 709 aa10.37□□□□□ -0.75
RTTN-208ENST00000581709 ZNF214Q9UL59 606 aaPredicted RBP10.37□□□□□ -0.75
RTTN-208ENST00000581709 CCPG1Q9ULG6 757 aa10.37□□□□□ -0.75
RTTN-208ENST00000581709 PHIPQ8WWQ0 1821 aa10.36□□□□□ -0.75
RTTN-208ENST00000581709 PNMA6FA0A0J9YX94 578 aa10.36□□□□□ -0.75
RTTN-208ENST00000581709 SLC15A5A6NIM6 579 aa10.36□□□□□ -0.75
RTTN-208ENST00000581709 ZBTB5O15062 677 aa10.36□□□□□ -0.75
RTTN-208ENST00000581709 ALAS1P13196 640 aa10.36□□□□□ -0.75
RTTN-208ENST00000581709 KCTD2Q14681 263 aa10.36□□□□□ -0.75
RTTN-208ENST00000581709 RABEP1Q15276 862 aa10.36□□□□□ -0.75
RTTN-208ENST00000581709 OTOP1Q7RTM1 612 aa10.36□□□□□ -0.75
RTTN-208ENST00000581709 GPR142Q7Z601 462 aa10.36□□□□□ -0.75
RTTN-208ENST00000581709 FBXO11Q86XK2 927 aa10.36□□□□□ -0.75
RTTN-208ENST00000581709 RAB11FIP4Q86YS3 637 aa10.36□□□□□ -0.75
RTTN-208ENST00000581709 ABRAQ8N0Z2 381 aa10.36□□□□□ -0.75
RTTN-208ENST00000581709 CCDC82Q8N4S0 544 aa10.36□□□□□ -0.75
RTTN-208ENST00000581709 SRBD1Q8N5C6 995 aaKnown RBP10.36□□□□□ -0.75
RTTN-208ENST00000581709 RRP36Q96EU6 259 aaKnown RBP10.36□□□□□ -0.75
RTTN-208ENST00000581709 TRERF1Q96PN7 1200 aa10.36□□□□□ -0.75
RTTN-208ENST00000581709 NUDT12Q9BQG2 462 aa10.36□□□□□ -0.75
RTTN-208ENST00000581709 SPZ1Q9BXG8 430 aa10.36□□□□□ -0.75
RTTN-208ENST00000581709 CPVLQ9H3G5 476 aa10.36□□□□□ -0.75
RTTN-208ENST00000581709 RIOX1Q9H6W3 641 aa10.36□□□□□ -0.75
RTTN-208ENST00000581709 SLC5A4Q9NY91 659 aa10.36□□□□□ -0.75
RTTN-208ENST00000581709 SEC63Q9UGP8 760 aaKnown RBP10.36□□□□□ -0.75
RTTN-208ENST00000581709 SRRDQ9UH36 339 aa10.36□□□□□ -0.75
RTTN-208ENST00000581709 ZNF536O15090 1300 aa10.35□□□□□ -0.75
RTTN-208ENST00000581709 ATAD5Q96QE3 1844 aa10.35□□□□□ -0.75
RTTN-208ENST00000581709 CPLX1O14810 134 aa10.35□□□□□ -0.75
RTTN-208ENST00000581709 ST18O60284 1047 aa10.35□□□□□ -0.75
RTTN-208ENST00000581709 PTPREP23469 700 aa10.35□□□□□ -0.75
RTTN-208ENST00000581709 ADD1P35611 737 aaKnown RBP10.35□□□□□ -0.75
RTTN-208ENST00000581709 AK2P54819 239 aa10.35□□□□□ -0.75
RTTN-208ENST00000581709 CDC37Q16543 378 aaPredicted RBP10.35□□□□□ -0.75
RTTN-208ENST00000581709 CPLX2Q6PUV4 134 aaKnown RBP10.35□□□□□ -0.75
RTTN-208ENST00000581709 TMTC3Q6ZXV5 915 aa10.35□□□□□ -0.75
RTTN-208ENST00000581709 NBPF11Q86T75 865 aa10.35□□□□□ -0.75
RTTN-208ENST00000581709 DPP9Q86TI2 863 aa10.35□□□□□ -0.75
RTTN-208ENST00000581709 HOMER1Q86YM7 354 aa10.35□□□□□ -0.75
RTTN-208ENST00000581709 ANKRD35Q8N283 1001 aa10.35□□□□□ -0.75
RTTN-208ENST00000581709 RAET1EQ8TD07 263 aa10.35□□□□□ -0.75
RTTN-208ENST00000581709 SOCS4Q8WXH5 440 aa10.35□□□□□ -0.75
RTTN-208ENST00000581709 DDX11Q96FC9 970 aa10.35□□□□□ -0.75
RTTN-208ENST00000581709 KIF2CQ99661 725 aa10.35□□□□□ -0.75
RTTN-208ENST00000581709 LARP6Q9BRS8 491 aaKnown RBP10.35□□□□□ -0.75
RTTN-208ENST00000581709 AMNQ9BXJ7 453 aa10.35□□□□□ -0.75
RTTN-208ENST00000581709 SLKQ9H2G2 1235 aaPredicted RBP10.35□□□□□ -0.75
RTTN-208ENST00000581709 HOMER2Q9NSB8 354 aa10.35□□□□□ -0.75
RTTN-208ENST00000581709 RIPK3Q9Y572 518 aa10.35□□□□□ -0.75
RTTN-208ENST00000581709 GREB1LQ9C091 1923 aaPredicted RBP10.35□□□□□ -0.75
RTTN-208ENST00000581709 CYTH3O43739 400 aa10.34□□□□□ -0.75
RTTN-208ENST00000581709 PLEKHA8P1O95397 391 aa10.34□□□□□ -0.75
RTTN-208ENST00000581709 CTGFP29279 349 aa10.34□□□□□ -0.75
RTTN-208ENST00000581709 FLT3LGP49771 235 aa10.34□□□□□ -0.75
RTTN-208ENST00000581709 CCT2P78371 535 aaKnown RBP10.34□□□□□ -0.75
RTTN-208ENST00000581709 AKAP17AQ02040 695 aaKnown RBP10.34□□□□□ -0.75
RTTN-208ENST00000581709 STK3Q13188 491 aa10.34□□□□□ -0.75
RTTN-208ENST00000581709 QRICH1Q2TAL8 776 aa10.34□□□□□ -0.75
RTTN-208ENST00000581709 USH1GQ495M9 461 aa10.34□□□□□ -0.75
RTTN-208ENST00000581709 MCF2L2Q86YR7 1114 aa10.34□□□□□ -0.75
RTTN-208ENST00000581709 CMTR1Q8N1G2 835 aaKnown RBP10.34□□□□□ -0.75
RTTN-208ENST00000581709 PIBF1Q8WXW3 757 aa10.34□□□□□ -0.75
RTTN-208ENST00000581709 MTMR8Q96EF0 704 aa10.34□□□□□ -0.75
RTTN-208ENST00000581709 PIGSQ96S52 555 aa10.34□□□□□ -0.75
RTTN-208ENST00000581709 MMP19Q99542 508 aa10.34□□□□□ -0.75
RTTN-208ENST00000581709 ACAD9Q9H845 621 aa10.34□□□□□ -0.75
RTTN-208ENST00000581709 RNF146Q9NTX7 359 aa10.34□□□□□ -0.75
RTTN-208ENST00000581709 GJD2Q9UKL4 321 aa10.34□□□□□ -0.75
RTTN-208ENST00000581709 TPCN1Q9ULQ1 816 aa10.34□□□□□ -0.75
RTTN-208ENST00000581709 LIMCH1Q9UPQ0 1083 aa10.34□□□□□ -0.75
RTTN-208ENST00000581709 HPS5Q9UPZ3 1129 aa10.34□□□□□ -0.75
RTTN-208ENST00000581709 PTPN22Q9Y2R2 807 aa10.34□□□□□ -0.75
RTTN-208ENST00000581709 MRPL11Q9Y3B7 192 aaKnown RBP10.34□□□□□ -0.75
RTTN-208ENST00000581709 PCDHA1Q9Y5I3 950 aa10.34□□□□□ -0.75
RTTN-208ENST00000581709 V9GY48 417 aaPredicted RBP10.34□□□□□ -0.75
RTTN-208ENST00000581709 LAMA4Q16363 1823 aa10.33□□□□□ -0.76
RTTN-208ENST00000581709 XRCC5P13010 732 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms