RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 FRMPD3Q5JV73 1810 aa22.92■■□□□ 1.26
SREBF1-220ENST00000581707 SLC16A2P36021 539 aa22.91■■□□□ 1.26
SREBF1-220ENST00000581707 TKFCQ3LXA3 575 aa22.91■■□□□ 1.26
SREBF1-220ENST00000581707 ZSCAN10Q96SZ4 725 aaPredicted RBP22.91■■□□□ 1.26
SREBF1-220ENST00000581707 SEPT4O43236 478 aa22.9■■□□□ 1.26
SREBF1-220ENST00000581707 ZNF543Q08ER8 600 aa22.9■■□□□ 1.26
SREBF1-220ENST00000581707 SYDE2Q5VT97 1194 aa22.9■■□□□ 1.26
SREBF1-220ENST00000581707 ANKS1AQ92625 1134 aa22.9■■□□□ 1.26
SREBF1-220ENST00000581707 ACAD9Q9H845 621 aa22.9■■□□□ 1.26
SREBF1-220ENST00000581707 NRBP1Q9UHY1 535 aa22.9■■□□□ 1.26
SREBF1-220ENST00000581707 NR2E3Q9Y5X4 410 aa22.9■■□□□ 1.26
SREBF1-220ENST00000581707 U3KPZ7 1027 aaPredicted RBP22.9■■□□□ 1.26
SREBF1-220ENST00000581707 EVI5O60447 810 aa22.89■■□□□ 1.25
SREBF1-220ENST00000581707 SNHG28P0DPA3 235 aa22.89■■□□□ 1.25
SREBF1-220ENST00000581707 ALAS1P13196 640 aa22.89■■□□□ 1.25
SREBF1-220ENST00000581707 MSL3Q8N5Y2 521 aaKnown RBP22.89■■□□□ 1.25
SREBF1-220ENST00000581707 TRERF1Q96PN7 1200 aa22.89■■□□□ 1.25
SREBF1-220ENST00000581707 RANBP17Q9H2T7 1088 aaKnown RBP22.89■■□□□ 1.25
SREBF1-220ENST00000581707 RNF146Q9NTX7 359 aa22.89■■□□□ 1.25
SREBF1-220ENST00000581707 SMCHD1A6NHR9 2005 aa22.89■■□□□ 1.25
SREBF1-220ENST00000581707 ANO1Q5XXA6 986 aa22.88■■□□□ 1.25
SREBF1-220ENST00000581707 ENAHQ8N8S7 591 aaPredicted RBP22.88■■□□□ 1.25
SREBF1-220ENST00000581707 PNMA1Q8ND90 353 aa22.88■■□□□ 1.25
SREBF1-220ENST00000581707 UBAC1Q9BSL1 405 aa22.88■■□□□ 1.25
SREBF1-220ENST00000581707 KAT14Q9H8E8 782 aa22.88■■□□□ 1.25
SREBF1-220ENST00000581707 CCPG1Q9ULG6 757 aa22.88■■□□□ 1.25
SREBF1-220ENST00000581707 TNKSO95271 1327 aa22.87■■□□□ 1.25
SREBF1-220ENST00000581707 ALPK3Q96L96 1907 aa22.87■■□□□ 1.25
SREBF1-220ENST00000581707 ICAM1P05362 532 aa22.87■■□□□ 1.25
SREBF1-220ENST00000581707 CYP21A2P08686 494 aa22.87■■□□□ 1.25
SREBF1-220ENST00000581707 COL6A1P12109 1028 aa22.87■■□□□ 1.25
SREBF1-220ENST00000581707 TRDNQ13061 729 aa22.87■■□□□ 1.25
SREBF1-220ENST00000581707 MAMDC4Q6UXC1 1216 aa22.87■■□□□ 1.25
SREBF1-220ENST00000581707 ZNF467Q7Z7K2 595 aaPredicted RBP22.87■■□□□ 1.25
SREBF1-220ENST00000581707 SKAP1Q86WV1 359 aa22.87■■□□□ 1.25
SREBF1-220ENST00000581707 CNPY2Q9Y2B0 182 aa22.87■■□□□ 1.25
SREBF1-220ENST00000581707 PFASO15067 1338 aa22.86■■□□□ 1.25
SREBF1-220ENST00000581707 SYNGAP1Q96PV0 1343 aa22.86■■□□□ 1.25
SREBF1-220ENST00000581707 TAL1P17542 331 aaPredicted RBP22.86■■□□□ 1.25
SREBF1-220ENST00000581707 GPATCH4Q5T3I0 446 aaKnown RBP22.86■■□□□ 1.25
SREBF1-220ENST00000581707 ARRDC4Q8NCT1 418 aa22.86■■□□□ 1.25
SREBF1-220ENST00000581707 MAP4K1Q92918 833 aa22.86■■□□□ 1.25
SREBF1-220ENST00000581707 A1CFQ9NQ94 594 aaKnown RBP22.86■■□□□ 1.25
SREBF1-220ENST00000581707 POTEB2H3BUK9 544 aa22.85■■□□□ 1.25
SREBF1-220ENST00000581707 MUM1L1Q5H9M0 696 aa22.85■■□□□ 1.25
SREBF1-220ENST00000581707 KIAA1211Q6ZU35 1233 aa22.85■■□□□ 1.25
SREBF1-220ENST00000581707 CYB5R4Q7L1T6 521 aa22.85■■□□□ 1.25
SREBF1-220ENST00000581707 CCDC136Q96JN2 1154 aa22.85■■□□□ 1.25
SREBF1-220ENST00000581707 DNM1LO00429 736 aa22.84■■□□□ 1.25
SREBF1-220ENST00000581707 SNAI1O95863 264 aaPredicted RBP22.84■■□□□ 1.25
SREBF1-220ENST00000581707 ZNF865P0CJ78 1059 aaPredicted RBP22.84■■□□□ 1.25
SREBF1-220ENST00000581707 GOLGA8HP0CJ92 632 aa22.84■■□□□ 1.25
SREBF1-220ENST00000581707 CNTN2Q02246 1040 aa22.84■■□□□ 1.25
SREBF1-220ENST00000581707 BMP2KLQ5H9B9 411 aa22.84■■□□□ 1.25
SREBF1-220ENST00000581707 IFIT1BQ5T764 474 aaKnown RBP22.84■■□□□ 1.25
SREBF1-220ENST00000581707 FGD4Q96M96 766 aa22.84■■□□□ 1.25
SREBF1-220ENST00000581707 MCM3APO60318 1980 aa22.83■■□□□ 1.25
SREBF1-220ENST00000581707 RARBP10826 455 aa22.83■■□□□ 1.25
SREBF1-220ENST00000581707 GJC2Q5T442 439 aaPredicted RBP22.83■■□□□ 1.25
SREBF1-220ENST00000581707 FAM133AQ8N9E0 248 aa22.83■■□□□ 1.25
SREBF1-220ENST00000581707 ESYT1Q9BSJ8 1104 aa22.83■■□□□ 1.25
SREBF1-220ENST00000581707 SENP6Q9GZR1 1112 aaPredicted RBP22.83■■□□□ 1.25
SREBF1-220ENST00000581707 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.83■■□□□ 1.25
SREBF1-220ENST00000581707 PNMA2Q9UL42 364 aa22.83■■□□□ 1.25
SREBF1-220ENST00000581707 RBM8AQ9Y5S9 174 aaKnown RBP22.83■■□□□ 1.25
SREBF1-220ENST00000581707 TAF6LQ9Y6J9 622 aa22.83■■□□□ 1.25
SREBF1-220ENST00000581707 E7EWF7 191 aa22.82■■□□□ 1.24
SREBF1-220ENST00000581707 MYCNP04198 464 aaPredicted RBP22.82■■□□□ 1.24
SREBF1-220ENST00000581707 AKR1A1P14550 325 aa22.82■■□□□ 1.24
SREBF1-220ENST00000581707 SEC23AQ15436 765 aa22.82■■□□□ 1.24
SREBF1-220ENST00000581707 C7orf61Q8IZ16 206 aa22.82■■□□□ 1.24
SREBF1-220ENST00000581707 UBA5Q9GZZ9 404 aa22.82■■□□□ 1.24
SREBF1-220ENST00000581707 CYP39A1Q9NYL5 469 aa22.82■■□□□ 1.24
SREBF1-220ENST00000581707 SOWAHBA6NEL2 793 aa22.81■■□□□ 1.24
SREBF1-220ENST00000581707 KBTBD13C9JR72 458 aa22.81■■□□□ 1.24
SREBF1-220ENST00000581707 ASPRV1Q53RT3 343 aa22.81■■□□□ 1.24
SREBF1-220ENST00000581707 NSMFQ6X4W1 530 aa22.81■■□□□ 1.24
SREBF1-220ENST00000581707 ARMCX2Q7L311 632 aa22.81■■□□□ 1.24
SREBF1-220ENST00000581707 RALYLQ86SE5 291 aaKnown RBP22.81■■□□□ 1.24
SREBF1-220ENST00000581707 CCDC144CPQ8IYA2 1237 aa22.81■■□□□ 1.24
SREBF1-220ENST00000581707 NCOA7Q8NI08 942 aa22.81■■□□□ 1.24
SREBF1-220ENST00000581707 CPVLQ9H3G5 476 aa22.81■■□□□ 1.24
SREBF1-220ENST00000581707 XPNPEP3Q9NQH7 507 aa22.81■■□□□ 1.24
SREBF1-220ENST00000581707 ZHX1Q9UKY1 873 aaPredicted RBP22.81■■□□□ 1.24
SREBF1-220ENST00000581707 FAM184BQ9ULE4 1060 aa22.81■■□□□ 1.24
SREBF1-220ENST00000581707 PARP1P09874 1014 aaKnown RBP22.8■■□□□ 1.24
SREBF1-220ENST00000581707 ACVR2BQ13705 512 aa22.8■■□□□ 1.24
SREBF1-220ENST00000581707 LRRC41Q15345 812 aa22.8■■□□□ 1.24
SREBF1-220ENST00000581707 STOX1Q6ZVD7 989 aa22.8■■□□□ 1.24
SREBF1-220ENST00000581707 LSG1Q9H089 658 aaKnown RBP22.8■■□□□ 1.24
SREBF1-220ENST00000581707 ABHD16BQ9H3Z7 469 aa22.8■■□□□ 1.24
SREBF1-220ENST00000581707 COLQQ9Y215 455 aaPredicted RBP22.8■■□□□ 1.24
SREBF1-220ENST00000581707 DNAH12Q6ZR08 3092 aa22.8■■□□□ 1.24
SREBF1-220ENST00000581707 ASB14A6NK59 587 aa22.79■■□□□ 1.24
SREBF1-220ENST00000581707 IFIT3O14879 490 aaKnown RBP22.79■■□□□ 1.24
SREBF1-220ENST00000581707 LRRC26Q2I0M4 334 aa22.79■■□□□ 1.24
SREBF1-220ENST00000581707 HABP4Q5JVS0 413 aaKnown RBP22.79■■□□□ 1.24
SREBF1-220ENST00000581707 WDR19Q8NEZ3 1342 aa22.79■■□□□ 1.24
SREBF1-220ENST00000581707 ERICH2A1L162 156 aa22.78■■□□□ 1.24
SREBF1-220ENST00000581707 NFIBO00712 420 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms