RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 NPDC1Q9NQX5 325 aaPredicted RBP11.52□□□□□ -0.57
TOP3A-211ENST00000581536 ANAPC4Q9UJX5 808 aa11.52□□□□□ -0.57
TOP3A-211ENST00000581536 VPS9D1Q9Y2B5 631 aa11.52□□□□□ -0.57
TOP3A-211ENST00000581536 RANBP6O60518 1105 aaKnown RBP11.51□□□□□ -0.57
TOP3A-211ENST00000581536 COBLO75128 1261 aa11.51□□□□□ -0.57
TOP3A-211ENST00000581536 TTLL1O95922 423 aa11.51□□□□□ -0.57
TOP3A-211ENST00000581536 HMGCRP04035 888 aa11.51□□□□□ -0.57
TOP3A-211ENST00000581536 SLC3A2P08195 630 aaKnown RBP11.51□□□□□ -0.57
TOP3A-211ENST00000581536 FGRP09769 529 aa11.51□□□□□ -0.57
TOP3A-211ENST00000581536 XRCC5P13010 732 aaKnown RBP11.51□□□□□ -0.57
TOP3A-211ENST00000581536 CCND3P30281 292 aaPredicted RBP11.51□□□□□ -0.57
TOP3A-211ENST00000581536 CCNA1P78396 465 aa11.51□□□□□ -0.57
TOP3A-211ENST00000581536 PTGDRQ13258 359 aa11.51□□□□□ -0.57
TOP3A-211ENST00000581536 RRP12Q5JTH9 1297 aaKnown RBP11.51□□□□□ -0.57
TOP3A-211ENST00000581536 ADGRD1Q6QNK2 874 aa11.51□□□□□ -0.57
TOP3A-211ENST00000581536 NCAPG2Q86XI2 1143 aa11.51□□□□□ -0.57
TOP3A-211ENST00000581536 REPS2Q8NFH8 660 aa11.51□□□□□ -0.57
TOP3A-211ENST00000581536 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.51□□□□□ -0.57
TOP3A-211ENST00000581536 ZNF287Q9HBT7 754 aa11.51□□□□□ -0.57
TOP3A-211ENST00000581536 PAK6Q9NQU5 681 aaPredicted RBP11.51□□□□□ -0.57
TOP3A-211ENST00000581536 PPP1R9AQ9ULJ8 1098 aa11.51□□□□□ -0.57
TOP3A-211ENST00000581536 CCDC171Q6TFL3 1326 aa11.51□□□□□ -0.57
TOP3A-211ENST00000581536 ALPK3Q96L96 1907 aa11.5□□□□□ -0.57
TOP3A-211ENST00000581536 SLC15A5A6NIM6 579 aa11.5□□□□□ -0.57
TOP3A-211ENST00000581536 TSPY2A6NKD2 308 aa11.5□□□□□ -0.57
TOP3A-211ENST00000581536 VWA5AO00534 786 aa11.5□□□□□ -0.57
TOP3A-211ENST00000581536 MCCP23508 829 aa11.5□□□□□ -0.57
TOP3A-211ENST00000581536 RGS2P41220 211 aa11.5□□□□□ -0.57
TOP3A-211ENST00000581536 SLC4A3P48751 1232 aa11.5□□□□□ -0.57
TOP3A-211ENST00000581536 GRB14Q14449 540 aa11.5□□□□□ -0.57
TOP3A-211ENST00000581536 TTC22Q5TAA0 569 aa11.5□□□□□ -0.57
TOP3A-211ENST00000581536 SLFN13Q68D06 897 aa11.5□□□□□ -0.57
TOP3A-211ENST00000581536 RASGRP2Q7LDG7 609 aa11.5□□□□□ -0.57
TOP3A-211ENST00000581536 TICAM2Q86XR7 235 aa11.5□□□□□ -0.57
TOP3A-211ENST00000581536 SOCS4Q8WXH5 440 aa11.5□□□□□ -0.57
TOP3A-211ENST00000581536 HMX1Q9NP08 348 aaPredicted RBP11.5□□□□□ -0.57
TOP3A-211ENST00000581536 MTMR7Q9Y216 660 aa11.5□□□□□ -0.57
TOP3A-211ENST00000581536 RIPK3Q9Y572 518 aa11.5□□□□□ -0.57
TOP3A-211ENST00000581536 RPTORQ8N122 1335 aa11.5□□□□□ -0.57
TOP3A-211ENST00000581536 MCM3APO60318 1980 aa11.49□□□□□ -0.57
TOP3A-211ENST00000581536 ORC4O43929 436 aa11.49□□□□□ -0.57
TOP3A-211ENST00000581536 ZKSCAN1P17029 563 aaPredicted RBP11.49□□□□□ -0.57
TOP3A-211ENST00000581536 ADORA2AP29274 412 aa11.49□□□□□ -0.57
TOP3A-211ENST00000581536 STAT3P40763 770 aa11.49□□□□□ -0.57
TOP3A-211ENST00000581536 PRSS12P56730 875 aa11.49□□□□□ -0.57
TOP3A-211ENST00000581536 SNAP25P60880 206 aa11.49□□□□□ -0.57
TOP3A-211ENST00000581536 PRAMEF19Q5SWL8 479 aa11.49□□□□□ -0.57
TOP3A-211ENST00000581536 MAP3K21Q5TCX8 1036 aa11.49□□□□□ -0.57
TOP3A-211ENST00000581536 UBE2Q1Q7Z7E8 422 aa11.49□□□□□ -0.57
TOP3A-211ENST00000581536 DPP9Q86TI2 863 aa11.49□□□□□ -0.57
TOP3A-211ENST00000581536 MB21D1Q8N884 522 aa11.49□□□□□ -0.57
TOP3A-211ENST00000581536 KIFC2Q96AC6 838 aa11.49□□□□□ -0.57
TOP3A-211ENST00000581536 TOMM22Q9NS69 142 aa11.49□□□□□ -0.57
TOP3A-211ENST00000581536 DIAPH3Q9NSV4 1193 aa11.49□□□□□ -0.57
TOP3A-211ENST00000581536 RBM27Q9P2N5 1060 aaKnown RBP11.49□□□□□ -0.57
TOP3A-211ENST00000581536 ZNF214Q9UL59 606 aaPredicted RBP11.49□□□□□ -0.57
TOP3A-211ENST00000581536 STX8Q9UNK0 236 aa11.49□□□□□ -0.57
TOP3A-211ENST00000581536 IVNS1ABPQ9Y6Y0 642 aa11.49□□□□□ -0.57
TOP3A-211ENST00000581536 FRMPD3Q5JV73 1810 aa11.49□□□□□ -0.57
TOP3A-211ENST00000581536 TMEM232C9JQI7 657 aa11.48□□□□□ -0.57
TOP3A-211ENST00000581536 STRNO43815 780 aa11.48□□□□□ -0.57
TOP3A-211ENST00000581536 IGHA2P01877 340 aa11.48□□□□□ -0.57
TOP3A-211ENST00000581536 PGK2P07205 417 aa11.48□□□□□ -0.57
TOP3A-211ENST00000581536 BMP3P12645 472 aa11.48□□□□□ -0.57
TOP3A-211ENST00000581536 CYP2C19P33261 490 aa11.48□□□□□ -0.57
TOP3A-211ENST00000581536 KCTD1Q719H9 257 aa11.48□□□□□ -0.57
TOP3A-211ENST00000581536 TBC1D10CQ8IV04 446 aa11.48□□□□□ -0.57
TOP3A-211ENST00000581536 CPXCR1Q8N123 301 aa11.48□□□□□ -0.57
TOP3A-211ENST00000581536 PRPF38AQ8NAV1 312 aaKnown RBP11.48□□□□□ -0.57
TOP3A-211ENST00000581536 GMCL1P1Q8NEA9 526 aa11.48□□□□□ -0.57
TOP3A-211ENST00000581536 SHCBP1Q8NEM2 672 aa11.48□□□□□ -0.57
TOP3A-211ENST00000581536 TRPV1Q8NER1 839 aa11.48□□□□□ -0.57
TOP3A-211ENST00000581536 DIS3LQ8TF46 1054 aaKnown RBP11.48□□□□□ -0.57
TOP3A-211ENST00000581536 PAWRQ96IZ0 340 aaKnown RBP11.48□□□□□ -0.57
TOP3A-211ENST00000581536 SLF1Q9BQI6 1058 aa11.48□□□□□ -0.57
TOP3A-211ENST00000581536 ZKSCAN3Q9BRR0 538 aa11.48□□□□□ -0.57
TOP3A-211ENST00000581536 MROH8Q9H579 483 aa11.48□□□□□ -0.57
TOP3A-211ENST00000581536 PLIN4Q96Q06 1357 aa11.48□□□□□ -0.57
TOP3A-211ENST00000581536 ZNF213O14771 459 aa11.47□□□□□ -0.57
TOP3A-211ENST00000581536 HOXC6P09630 235 aa11.47□□□□□ -0.57
TOP3A-211ENST00000581536 NOVP48745 357 aa11.47□□□□□ -0.57
TOP3A-211ENST00000581536 AKNAD1Q5T1N1 836 aa11.47□□□□□ -0.57
TOP3A-211ENST00000581536 TTBK2Q6IQ55 1244 aa11.47□□□□□ -0.57
TOP3A-211ENST00000581536 MFSD6Q6ZSS7 791 aa11.47□□□□□ -0.57
TOP3A-211ENST00000581536 RIOX2Q8IUF8 465 aa11.47□□□□□ -0.57
TOP3A-211ENST00000581536 GPIHBP1Q8IV16 184 aa11.47□□□□□ -0.57
TOP3A-211ENST00000581536 TRMT44Q8IYL2 757 aaKnown RBP11.47□□□□□ -0.57
TOP3A-211ENST00000581536 DPF3Q92784 378 aa11.47□□□□□ -0.57
TOP3A-211ENST00000581536 APBA2Q99767 749 aa11.47□□□□□ -0.57
TOP3A-211ENST00000581536 TMEM47Q9BQJ4 181 aa11.47□□□□□ -0.57
TOP3A-211ENST00000581536 RAVER2Q9HCJ3 691 aaKnown RBP11.47□□□□□ -0.57
TOP3A-211ENST00000581536 RABGEF1Q9UJ41 708 aa11.47□□□□□ -0.57
TOP3A-211ENST00000581536 FEM1BQ9UK73 627 aa11.47□□□□□ -0.57
TOP3A-211ENST00000581536 LAMA4Q16363 1823 aa11.46□□□□□ -0.57
TOP3A-211ENST00000581536 NEDD4P46934 1319 aa11.46□□□□□ -0.57
TOP3A-211ENST00000581536 HIP1O00291 1037 aa11.46□□□□□ -0.57
TOP3A-211ENST00000581536 ZBED4O75132 1171 aa11.46□□□□□ -0.57
TOP3A-211ENST00000581536 FARP2O94887 1054 aaPredicted RBP11.46□□□□□ -0.57
TOP3A-211ENST00000581536 SLC25A27O95847 323 aa11.46□□□□□ -0.57
TOP3A-211ENST00000581536 FCER1AP12319 257 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms