RNA–Protein interactions for RNA: ENST00000581108.5

CSNK1D-216, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-216ENST00000581108 MAMDC4Q6UXC1 1216 aa25.13■■□□□ 1.61
CSNK1D-216ENST00000581108 MFSD6Q6ZSS7 791 aa25.13■■□□□ 1.61
CSNK1D-216ENST00000581108 TBC1D10CQ8IV04 446 aa25.13■■□□□ 1.61
CSNK1D-216ENST00000581108 MSL3Q8N5Y2 521 aaKnown RBP25.13■■□□□ 1.61
CSNK1D-216ENST00000581108 TMEM47Q9BQJ4 181 aa25.13■■□□□ 1.61
CSNK1D-216ENST00000581108 XPNPEP3Q9NQH7 507 aa25.13■■□□□ 1.61
CSNK1D-216ENST00000581108 TCP11L1Q9NUJ3 509 aa25.13■■□□□ 1.61
CSNK1D-216ENST00000581108 PRR12Q9ULL5 1215 aa25.13■■□□□ 1.61
CSNK1D-216ENST00000581108 TOP1P11387 765 aaKnown RBP25.12■■□□□ 1.61
CSNK1D-216ENST00000581108 CCDC96Q2M329 555 aa25.12■■□□□ 1.61
CSNK1D-216ENST00000581108 CCDC174Q6PII3 467 aa25.12■■□□□ 1.61
CSNK1D-216ENST00000581108 SLC39A5Q6ZMH5 540 aa25.12■■□□□ 1.61
CSNK1D-216ENST00000581108 ZNF467Q7Z7K2 595 aaPredicted RBP25.12■■□□□ 1.61
CSNK1D-216ENST00000581108 FERMT2Q96AC1 680 aa25.12■■□□□ 1.61
CSNK1D-216ENST00000581108 FGD4Q96M96 766 aa25.12■■□□□ 1.61
CSNK1D-216ENST00000581108 LAMA3Q16787 3333 aa25.12■■□□□ 1.61
CSNK1D-216ENST00000581108 SYNGAP1Q96PV0 1343 aa25.12■■□□□ 1.61
CSNK1D-216ENST00000581108 PGK1P00558 417 aa25.11■■□□□ 1.61
CSNK1D-216ENST00000581108 AKR1A1P14550 325 aa25.11■■□□□ 1.61
CSNK1D-216ENST00000581108 PDE4AP27815 886 aa25.11■■□□□ 1.61
CSNK1D-216ENST00000581108 RTP1P59025 263 aa25.11■■□□□ 1.61
CSNK1D-216ENST00000581108 TTBK2Q6IQ55 1244 aa25.11■■□□□ 1.61
CSNK1D-216ENST00000581108 DCAF4Q8WV16 495 aa25.11■■□□□ 1.61
CSNK1D-216ENST00000581108 LENG1Q96BZ8 264 aaPredicted RBP25.11■■□□□ 1.61
CSNK1D-216ENST00000581108 ACAD9Q9H845 621 aa25.11■■□□□ 1.61
CSNK1D-216ENST00000581108 RNF146Q9NTX7 359 aa25.11■■□□□ 1.61
CSNK1D-216ENST00000581108 HIP1O00291 1037 aa25.1■■□□□ 1.61
CSNK1D-216ENST00000581108 ZNF213O14771 459 aa25.1■■□□□ 1.61
CSNK1D-216ENST00000581108 ALAS1P13196 640 aa25.1■■□□□ 1.61
CSNK1D-216ENST00000581108 CNTN2Q02246 1040 aa25.1■■□□□ 1.61
CSNK1D-216ENST00000581108 TRERF1Q96PN7 1200 aa25.1■■□□□ 1.61
CSNK1D-216ENST00000581108 ATP11BQ9Y2G3 1177 aa25.1■■□□□ 1.61
CSNK1D-216ENST00000581108 PCP11498 1178 aaKnown RBP25.09■■□□□ 1.61
CSNK1D-216ENST00000581108 SLC16A2P36021 539 aa25.09■■□□□ 1.61
CSNK1D-216ENST00000581108 RNF41Q9H4P4 317 aaPredicted RBP25.09■■□□□ 1.61
CSNK1D-216ENST00000581108 A1CFQ9NQ94 594 aaKnown RBP25.09■■□□□ 1.61
CSNK1D-216ENST00000581108 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.09■■□□□ 1.61
CSNK1D-216ENST00000581108 ZHX1Q9UKY1 873 aaPredicted RBP25.09■■□□□ 1.61
CSNK1D-216ENST00000581108 FAM184BQ9ULE4 1060 aa25.09■■□□□ 1.61
CSNK1D-216ENST00000581108 LAMA4Q16363 1823 aa25.09■■□□□ 1.61
CSNK1D-216ENST00000581108 SOX1O00570 391 aaPredicted RBP25.08■■□□□ 1.61
CSNK1D-216ENST00000581108 MDM2Q00987 491 aaPredicted RBP25.08■■□□□ 1.61
CSNK1D-216ENST00000581108 ACVR2BQ13705 512 aa25.08■■□□□ 1.61
CSNK1D-216ENST00000581108 TKFCQ3LXA3 575 aa25.08■■□□□ 1.61
CSNK1D-216ENST00000581108 RNF180Q86T96 592 aa25.08■■□□□ 1.61
CSNK1D-216ENST00000581108 FAM133AQ8N9E0 248 aa25.08■■□□□ 1.61
CSNK1D-216ENST00000581108 TTC14Q96N46 770 aa25.08■■□□□ 1.61
CSNK1D-216ENST00000581108 UBE2OQ9C0C9 1292 aaKnown RBP25.08■■□□□ 1.61
CSNK1D-216ENST00000581108 GPCPD1Q9NPB8 672 aa25.08■■□□□ 1.61
CSNK1D-216ENST00000581108 NEDD4P46934 1319 aa25.08■■□□□ 1.6
CSNK1D-216ENST00000581108 FRMPD2Q68DX3 1309 aaPredicted RBP25.08■■□□□ 1.6
CSNK1D-216ENST00000581108 POTEB2H3BUK9 544 aa25.07■■□□□ 1.6
CSNK1D-216ENST00000581108 MUM1L1Q5H9M0 696 aa25.07■■□□□ 1.6
CSNK1D-216ENST00000581108 BTNL9Q6UXG8 535 aa25.07■■□□□ 1.6
CSNK1D-216ENST00000581108 ESR2Q92731 530 aa25.07■■□□□ 1.6
CSNK1D-216ENST00000581108 ZKSCAN3Q9BRR0 538 aa25.07■■□□□ 1.6
CSNK1D-216ENST00000581108 PHF24Q9UPV7 400 aa25.07■■□□□ 1.6
CSNK1D-216ENST00000581108 ADAMTS4O75173 837 aa25.06■■□□□ 1.6
CSNK1D-216ENST00000581108 ARMCX2Q7L311 632 aa25.06■■□□□ 1.6
CSNK1D-216ENST00000581108 CCDC144CPQ8IYA2 1237 aa25.06■■□□□ 1.6
CSNK1D-216ENST00000581108 DSCC1Q9BVC3 393 aa25.06■■□□□ 1.6
CSNK1D-216ENST00000581108 ABHD16BQ9H3Z7 469 aa25.06■■□□□ 1.6
CSNK1D-216ENST00000581108 CCPG1Q9ULG6 757 aa25.06■■□□□ 1.6
CSNK1D-216ENST00000581108 SOWAHBA6NEL2 793 aa25.05■■□□□ 1.6
CSNK1D-216ENST00000581108 PDHBP11177 359 aa25.05■■□□□ 1.6
CSNK1D-216ENST00000581108 GSPT1P15170 499 aaKnown RBP25.05■■□□□ 1.6
CSNK1D-216ENST00000581108 SNX17Q15036 470 aa25.05■■□□□ 1.6
CSNK1D-216ENST00000581108 TRIM60Q495X7 471 aa25.05■■□□□ 1.6
CSNK1D-216ENST00000581108 SYDE2Q5VT97 1194 aa25.05■■□□□ 1.6
CSNK1D-216ENST00000581108 LRCH3Q96II8 777 aa25.05■■□□□ 1.6
CSNK1D-216ENST00000581108 IL25Q9H293 177 aa25.05■■□□□ 1.6
CSNK1D-216ENST00000581108 RANBP17Q9H2T7 1088 aaKnown RBP25.05■■□□□ 1.6
CSNK1D-216ENST00000581108 SYNRGQ9UMZ2 1314 aa25.05■■□□□ 1.6
CSNK1D-216ENST00000581108 ADCY6O43306 1168 aa25.04■■□□□ 1.6
CSNK1D-216ENST00000581108 ICAM1P05362 532 aa25.04■■□□□ 1.6
CSNK1D-216ENST00000581108 CCDC144BQ3MJ40 725 aa25.04■■□□□ 1.6
CSNK1D-216ENST00000581108 TTC22Q5TAA0 569 aa25.04■■□□□ 1.6
CSNK1D-216ENST00000581108 TDHQ8IZJ6 230 aa25.04■■□□□ 1.6
CSNK1D-216ENST00000581108 CYP39A1Q9NYL5 469 aa25.04■■□□□ 1.6
CSNK1D-216ENST00000581108 PRKAG2Q9UGJ0 569 aa25.04■■□□□ 1.6
CSNK1D-216ENST00000581108 KDM4AO75164 1064 aa25.03■■□□□ 1.6
CSNK1D-216ENST00000581108 DUSP11O75319 330 aaKnown RBP25.03■■□□□ 1.6
CSNK1D-216ENST00000581108 C1orf53Q5VUE5 145 aa25.03■■□□□ 1.6
CSNK1D-216ENST00000581108 LBHD1Q9BQE6 289 aaPredicted RBP25.03■■□□□ 1.6
CSNK1D-216ENST00000581108 KATNBL1Q9H079 304 aa25.03■■□□□ 1.6
CSNK1D-216ENST00000581108 LCTP09848 1927 aa25.02■■□□□ 1.6
CSNK1D-216ENST00000581108 IRX5P78411 483 aaPredicted RBP25.02■■□□□ 1.6
CSNK1D-216ENST00000581108 ZNF543Q08ER8 600 aa25.02■■□□□ 1.6
CSNK1D-216ENST00000581108 NSMFQ6X4W1 530 aa25.02■■□□□ 1.6
CSNK1D-216ENST00000581108 DGKHQ86XP1 1220 aa25.02■■□□□ 1.6
CSNK1D-216ENST00000581108 KLHDC9Q8NEP7 349 aa25.02■■□□□ 1.6
CSNK1D-216ENST00000581108 TSEN34Q9BSV6 310 aaKnown RBP25.02■■□□□ 1.6
CSNK1D-216ENST00000581108 PRDM5Q9NQX1 630 aaPredicted RBP25.02■■□□□ 1.6
CSNK1D-216ENST00000581108 CTNNA3Q9UI47 895 aa25.02■■□□□ 1.6
CSNK1D-216ENST00000581108 DDX49Q9Y6V7 483 aaKnown RBP25.02■■□□□ 1.6
CSNK1D-216ENST00000581108 ASTN1O14525 1302 aa25.02■■□□□ 1.6
CSNK1D-216ENST00000581108 LTBP2Q14767 1821 aa25.01■■□□□ 1.59
CSNK1D-216ENST00000581108 A0A1W2PQ45 241 aaPredicted RBP25.01■■□□□ 1.59
CSNK1D-216ENST00000581108 A0A1W2PQY0 241 aa25.01■■□□□ 1.59
CSNK1D-216ENST00000581108 MYADML2A6NDP7 307 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms