RNA–Protein interactions for RNA: ENST00000580949.1

PTPRM-213, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-213ENST00000580949 CTBSQ01459 385 aa7.39□□□□□ -1.23
PTPRM-213ENST00000580949 EXOSC10Q01780 885 aaKnown RBP7.39□□□□□ -1.23
PTPRM-213ENST00000580949 MECOMQ03112 1051 aa7.39□□□□□ -1.23
PTPRM-213ENST00000580949 ST3GAL1Q11201 340 aa7.39□□□□□ -1.23
PTPRM-213ENST00000580949 TOB2Q14106 344 aaPredicted RBP7.39□□□□□ -1.23
PTPRM-213ENST00000580949 KRT32Q14532 448 aa7.39□□□□□ -1.23
PTPRM-213ENST00000580949 BLOC1S2Q6QNY1 142 aa7.39□□□□□ -1.23
PTPRM-213ENST00000580949 ZNF804AQ7Z570 1209 aa7.39□□□□□ -1.23
PTPRM-213ENST00000580949 ZNF622Q969S3 477 aaKnown RBP eCLIP7.39□□□□□ -1.23
PTPRM-213ENST00000580949 NSUN4Q96CB9 384 aaKnown RBP7.39□□□□□ -1.23
PTPRM-213ENST00000580949 IFT43Q96FT9 208 aa7.39□□□□□ -1.23
PTPRM-213ENST00000580949 NEK1Q96PY6 1258 aa7.39□□□□□ -1.23
PTPRM-213ENST00000580949 RIOK1Q9BRS2 568 aaKnown RBP7.39□□□□□ -1.23
PTPRM-213ENST00000580949 EPB41L4AQ9HCS5 686 aaPredicted RBP7.39□□□□□ -1.23
PTPRM-213ENST00000580949 CD209Q9NNX6 404 aa7.39□□□□□ -1.23
PTPRM-213ENST00000580949 BRD7Q9NPI1 651 aa7.39□□□□□ -1.23
PTPRM-213ENST00000580949 INCENPQ9NQS7 918 aa7.39□□□□□ -1.23
PTPRM-213ENST00000580949 MARK1Q9P0L2 795 aa7.39□□□□□ -1.23
PTPRM-213ENST00000580949 CTNNA3Q9UI47 895 aa7.39□□□□□ -1.23
PTPRM-213ENST00000580949 TPCN1Q9ULQ1 816 aa7.39□□□□□ -1.23
PTPRM-213ENST00000580949 MTMR7Q9Y216 660 aa7.39□□□□□ -1.23
PTPRM-213ENST00000580949 ANKRD31Q8N7Z5 1873 aa7.38□□□□□ -1.23
PTPRM-213ENST00000580949 A0A1B0GUL6 1792 aa7.38□□□□□ -1.23
PTPRM-213ENST00000580949 SALL1Q9NSC2 1324 aa7.38□□□□□ -1.23
PTPRM-213ENST00000580949 PATL2C9JE40 543 aaKnown RBP7.38□□□□□ -1.23
PTPRM-213ENST00000580949 TNFRSF10BO14763 440 aa7.38□□□□□ -1.23
PTPRM-213ENST00000580949 DTNBO60941 627 aa7.38□□□□□ -1.23
PTPRM-213ENST00000580949 HSP90AA1P07900 732 aaKnown RBP7.38□□□□□ -1.23
PTPRM-213ENST00000580949 BMP4P12644 408 aa7.38□□□□□ -1.23
PTPRM-213ENST00000580949 CD33P20138 364 aa7.38□□□□□ -1.23
PTPRM-213ENST00000580949 BRD2P25440 801 aaKnown RBP7.38□□□□□ -1.23
PTPRM-213ENST00000580949 ME3Q16798 604 aa7.38□□□□□ -1.23
PTPRM-213ENST00000580949 NAA16Q6N069 864 aaPredicted RBP7.38□□□□□ -1.23
PTPRM-213ENST00000580949 TBC1D10CQ8IV04 446 aa7.38□□□□□ -1.23
PTPRM-213ENST00000580949 IFNL3Q8IZI9 196 aa7.38□□□□□ -1.23
PTPRM-213ENST00000580949 ANP32EQ9BTT0 268 aa7.38□□□□□ -1.23
PTPRM-213ENST00000580949 ZDHHC9Q9Y397 364 aa7.38□□□□□ -1.23
PTPRM-213ENST00000580949 SMIM22K7EJ46 135 aa7.37□□□□□ -1.23
PTPRM-213ENST00000580949 C2CD2LO14523 706 aa7.37□□□□□ -1.23
PTPRM-213ENST00000580949 MICAL2O94851 1124 aa7.37□□□□□ -1.23
PTPRM-213ENST00000580949 APPP05067 770 aa7.37□□□□□ -1.23
PTPRM-213ENST00000580949 KCNA3P22001 575 aa7.37□□□□□ -1.23
PTPRM-213ENST00000580949 INPP5BP32019 993 aa7.37□□□□□ -1.23
PTPRM-213ENST00000580949 SCNN1AP37088 669 aa7.37□□□□□ -1.23
PTPRM-213ENST00000580949 IDH3AP50213 366 aa7.37□□□□□ -1.23
PTPRM-213ENST00000580949 ANTXR2P58335 489 aa7.37□□□□□ -1.23
PTPRM-213ENST00000580949 SFSWAPQ12872 951 aaKnown RBP7.37□□□□□ -1.23
PTPRM-213ENST00000580949 PKP1Q13835 747 aa7.37□□□□□ -1.23
PTPRM-213ENST00000580949 NFKBIBQ15653 356 aa7.37□□□□□ -1.23
PTPRM-213ENST00000580949 DPP8Q6V1X1 898 aaPredicted RBP7.37□□□□□ -1.23
PTPRM-213ENST00000580949 Q6ZUG5 572 aa7.37□□□□□ -1.23
PTPRM-213ENST00000580949 DHX32Q7L7V1 743 aaKnown RBP7.37□□□□□ -1.23
PTPRM-213ENST00000580949 MB21D2Q8IYB1 491 aaPredicted RBP7.37□□□□□ -1.23
PTPRM-213ENST00000580949 NECAB1Q8N987 351 aa7.37□□□□□ -1.23
PTPRM-213ENST00000580949 WDR66Q8TBY9 1149 aa7.37□□□□□ -1.23
PTPRM-213ENST00000580949 HELQQ8TDG4 1101 aa7.37□□□□□ -1.23
PTPRM-213ENST00000580949 INTS4Q96HW7 963 aaKnown RBP7.37□□□□□ -1.23
PTPRM-213ENST00000580949 LRRC2Q9BYS8 371 aa7.37□□□□□ -1.23
PTPRM-213ENST00000580949 CWC22Q9HCG8 908 aaKnown RBP7.37□□□□□ -1.23
PTPRM-213ENST00000580949 KCNQ5Q9NR82 932 aa7.37□□□□□ -1.23
PTPRM-213ENST00000580949 KCNH4Q9UQ05 1017 aa7.37□□□□□ -1.23
PTPRM-213ENST00000580949 SLC4A4Q9Y6R1 1079 aa7.37□□□□□ -1.23
PTPRM-213ENST00000580949 FAM205AQ6ZU69 1335 aa7.36□□□□□ -1.23
PTPRM-213ENST00000580949 ZNF213O14771 459 aa7.36□□□□□ -1.23
PTPRM-213ENST00000580949 ZBTB7AO95365 584 aa7.36□□□□□ -1.23
PTPRM-213ENST00000580949 LDHBP07195 334 aaKnown RBP7.36□□□□□ -1.23
PTPRM-213ENST00000580949 HMGB1P09429 215 aaKnown RBP7.36□□□□□ -1.23
PTPRM-213ENST00000580949 DPEP1P16444 411 aa7.36□□□□□ -1.23
PTPRM-213ENST00000580949 EPB42P16452 691 aa7.36□□□□□ -1.23
PTPRM-213ENST00000580949 GNAT2P19087 354 aa7.36□□□□□ -1.23
PTPRM-213ENST00000580949 LORP23490 312 aaPredicted RBP7.36□□□□□ -1.23
PTPRM-213ENST00000580949 ARSDP51689 593 aa7.36□□□□□ -1.23
PTPRM-213ENST00000580949 RAB3GAP1Q15042 981 aa7.36□□□□□ -1.23
PTPRM-213ENST00000580949 IMMTQ16891 758 aaKnown RBP7.36□□□□□ -1.23
PTPRM-213ENST00000580949 SPTY2D1Q68D10 685 aaPredicted RBP7.36□□□□□ -1.23
PTPRM-213ENST00000580949 CHST3Q7LGC8 479 aa7.36□□□□□ -1.23
PTPRM-213ENST00000580949 TREML1Q86YW5 311 aa7.36□□□□□ -1.23
PTPRM-213ENST00000580949 CCDC83Q8IWF9 413 aa7.36□□□□□ -1.23
PTPRM-213ENST00000580949 ETFBKMTQ8IXQ9 262 aa7.36□□□□□ -1.23
PTPRM-213ENST00000580949 SDR42E1Q8WUS8 393 aa7.36□□□□□ -1.23
PTPRM-213ENST00000580949 ZSCAN31Q96LW9 406 aaPredicted RBP7.36□□□□□ -1.23
PTPRM-213ENST00000580949 MXD3Q9BW11 206 aa7.36□□□□□ -1.23
PTPRM-213ENST00000580949 RTFDC1Q9BY42 306 aaPredicted RBP7.36□□□□□ -1.23
PTPRM-213ENST00000580949 AGXT2Q9BYV1 514 aa7.36□□□□□ -1.23
PTPRM-213ENST00000580949 AVENQ9NQS1 362 aaPredicted RBP7.36□□□□□ -1.23
PTPRM-213ENST00000580949 STIM2Q9P246 746 aa7.36□□□□□ -1.23
PTPRM-213ENST00000580949 DUOX1Q9NRD9 1551 aa7.36□□□□□ -1.23
PTPRM-213ENST00000580949 MYO5AQ9Y4I1 1855 aaKnown RBP7.36□□□□□ -1.23
PTPRM-213ENST00000580949 C10orf71Q711Q0 1435 aa7.35□□□□□ -1.23
PTPRM-213ENST00000580949 COL11A2P13942 1736 aaPredicted RBP7.35□□□□□ -1.23
PTPRM-213ENST00000580949 ZMYM6O95789 1325 aa7.35□□□□□ -1.23
PTPRM-213ENST00000580949 CYP2D7A0A087X1C5 515 aa7.35□□□□□ -1.23
PTPRM-213ENST00000580949 ARAFP10398 606 aa7.35□□□□□ -1.23
PTPRM-213ENST00000580949 R3HDM1Q15032 1099 aaKnown RBP7.35□□□□□ -1.23
PTPRM-213ENST00000580949 ANKRD1Q15327 319 aa7.35□□□□□ -1.23
PTPRM-213ENST00000580949 CYB5R4Q7L1T6 521 aa7.35□□□□□ -1.23
PTPRM-213ENST00000580949 CERS5Q8N5B7 392 aa7.35□□□□□ -1.23
PTPRM-213ENST00000580949 ZSCAN1Q8NBB4 408 aa7.35□□□□□ -1.23
PTPRM-213ENST00000580949 GTF3C2Q8WUA4 911 aaPredicted RBP7.35□□□□□ -1.23
PTPRM-213ENST00000580949 TNPO1Q92973 898 aaKnown RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms