RNA–Protein interactions for RNA: ENST00000579316.5

CSNK1D-211, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-211ENST00000579316 TTLL4Q14679 1199 aa16.76■□□□□ 0.27
CSNK1D-211ENST00000579316 CXCL17Q6UXB2 119 aa16.76■□□□□ 0.27
CSNK1D-211ENST00000579316 CCDC17Q96LX7 622 aa16.76■□□□□ 0.27
CSNK1D-211ENST00000579316 TRPV6Q9H1D0 765 aa16.76■□□□□ 0.27
CSNK1D-211ENST00000579316 KCNH6Q9H252 994 aa16.76■□□□□ 0.27
CSNK1D-211ENST00000579316 ANTXR1Q9H6X2 564 aa16.76■□□□□ 0.27
CSNK1D-211ENST00000579316 CERS4Q9HA82 394 aa16.76■□□□□ 0.27
CSNK1D-211ENST00000579316 DCP1AQ9NPI6 582 aaPredicted RBP16.76■□□□□ 0.27
CSNK1D-211ENST00000579316 TLR7Q9NYK1 1049 aaKnown RBP16.76■□□□□ 0.27
CSNK1D-211ENST00000579316 ASTN1O14525 1302 aa16.75■□□□□ 0.27
CSNK1D-211ENST00000579316 ATP2A1O14983 1001 aa16.75■□□□□ 0.27
CSNK1D-211ENST00000579316 B4GALT4O60513 344 aa16.75■□□□□ 0.27
CSNK1D-211ENST00000579316 LPXNO60711 386 aa16.75■□□□□ 0.27
CSNK1D-211ENST00000579316 CYP2D6P10635 497 aa16.75■□□□□ 0.27
CSNK1D-211ENST00000579316 BEX3Q00994 111 aa16.75■□□□□ 0.27
CSNK1D-211ENST00000579316 SNRNP48Q6IEG0 339 aaKnown RBP16.75■□□□□ 0.27
CSNK1D-211ENST00000579316 ARMCX2Q7L311 632 aa16.75■□□□□ 0.27
CSNK1D-211ENST00000579316 TRMT2AQ8IZ69 625 aaKnown RBP16.75■□□□□ 0.27
CSNK1D-211ENST00000579316 PHOSPHO2Q8TCD6 241 aa16.75■□□□□ 0.27
CSNK1D-211ENST00000579316 SLC9A7Q96T83 725 aa16.75■□□□□ 0.27
CSNK1D-211ENST00000579316 RIPK3Q9Y572 518 aa16.75■□□□□ 0.27
CSNK1D-211ENST00000579316 ZNF318Q5VUA4 2279 aa16.75■□□□□ 0.27
CSNK1D-211ENST00000579316 ARHGEF15O94989 841 aa16.74■□□□□ 0.27
CSNK1D-211ENST00000579316 EEF2P13639 858 aaKnown RBP16.74■□□□□ 0.27
CSNK1D-211ENST00000579316 GRB10Q13322 594 aa16.74■□□□□ 0.27
CSNK1D-211ENST00000579316 FAM83BQ5T0W9 1011 aa16.74■□□□□ 0.27
CSNK1D-211ENST00000579316 SSH3Q8TE77 659 aa16.74■□□□□ 0.27
CSNK1D-211ENST00000579316 ARNTL2Q8WYA1 636 aa16.74■□□□□ 0.27
CSNK1D-211ENST00000579316 DYNLL2Q96FJ2 89 aa16.74■□□□□ 0.27
CSNK1D-211ENST00000579316 SCLYQ96I15 445 aa16.74■□□□□ 0.27
CSNK1D-211ENST00000579316 SLF1Q9BQI6 1058 aa16.74■□□□□ 0.27
CSNK1D-211ENST00000579316 KANSL2Q9H9L4 492 aa16.74■□□□□ 0.27
CSNK1D-211ENST00000579316 GOPCQ9HD26 462 aa16.74■□□□□ 0.27
CSNK1D-211ENST00000579316 GNEQ9Y223 722 aaKnown RBP16.74■□□□□ 0.27
CSNK1D-211ENST00000579316 COL4A4P53420 1690 aaPredicted RBP16.73■□□□□ 0.27
CSNK1D-211ENST00000579316 OS9Q13438 667 aaPredicted RBP16.73■□□□□ 0.27
CSNK1D-211ENST00000579316 FAM178BQ8IXR5 827 aa16.73■□□□□ 0.27
CSNK1D-211ENST00000579316 GJD3Q8N144 294 aa16.73■□□□□ 0.27
CSNK1D-211ENST00000579316 LMCD1Q9NZU5 365 aa16.73■□□□□ 0.27
CSNK1D-211ENST00000579316 ALADP13716 330 aa16.72■□□□□ 0.27
CSNK1D-211ENST00000579316 PDE6AP16499 860 aa16.72■□□□□ 0.27
CSNK1D-211ENST00000579316 TNFAIP2Q03169 654 aa16.72■□□□□ 0.27
CSNK1D-211ENST00000579316 FSCN1Q16658 493 aaKnown RBP16.72■□□□□ 0.27
CSNK1D-211ENST00000579316 TLK2Q86UE8 772 aa16.72■□□□□ 0.27
CSNK1D-211ENST00000579316 CCDC144CPQ8IYA2 1237 aa16.72■□□□□ 0.27
CSNK1D-211ENST00000579316 SDR42E1Q8WUS8 393 aa16.72■□□□□ 0.27
CSNK1D-211ENST00000579316 EAF2Q96CJ1 260 aaPredicted RBP16.72■□□□□ 0.27
CSNK1D-211ENST00000579316 NOP58Q9Y2X3 529 aaKnown RBP16.72■□□□□ 0.27
CSNK1D-211ENST00000579316 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.71■□□□□ 0.27
CSNK1D-211ENST00000579316 HERC6Q8IVU3 1022 aa16.71■□□□□ 0.27
CSNK1D-211ENST00000579316 CCDC8Q9H0W5 538 aaPredicted RBP16.71■□□□□ 0.27
CSNK1D-211ENST00000579316 ALDH8A1Q9H2A2 487 aaPredicted RBP16.71■□□□□ 0.27
CSNK1D-211ENST00000579316 FBXO40Q9UH90 709 aa16.71■□□□□ 0.27
CSNK1D-211ENST00000579316 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.7■□□□□ 0.26
CSNK1D-211ENST00000579316 ZEB2O60315 1214 aa16.7■□□□□ 0.26
CSNK1D-211ENST00000579316 SURF6O75683 361 aaKnown RBP16.7■□□□□ 0.26
CSNK1D-211ENST00000579316 ACTN1P12814 892 aa16.7■□□□□ 0.26
CSNK1D-211ENST00000579316 RFC2P35250 354 aa16.7■□□□□ 0.26
CSNK1D-211ENST00000579316 CDK8P49336 464 aa16.7■□□□□ 0.26
CSNK1D-211ENST00000579316 RARSP54136 660 aaKnown RBP16.7■□□□□ 0.26
CSNK1D-211ENST00000579316 LEXMQ3ZCV2 418 aa16.7■□□□□ 0.26
CSNK1D-211ENST00000579316 MIER1Q8N108 512 aa16.7■□□□□ 0.26
CSNK1D-211ENST00000579316 ANKRD35Q8N283 1001 aa16.7■□□□□ 0.26
CSNK1D-211ENST00000579316 LCORLQ8N3X6 602 aa16.7■□□□□ 0.26
CSNK1D-211ENST00000579316 FBXL18Q96ME1 805 aa16.7■□□□□ 0.26
CSNK1D-211ENST00000579316 UBE2ZQ9H832 354 aaPredicted RBP16.7■□□□□ 0.26
CSNK1D-211ENST00000579316 CACNA1AO00555 2505 aa16.7■□□□□ 0.26
CSNK1D-211ENST00000579316 GREB1LQ9C091 1923 aaPredicted RBP16.7■□□□□ 0.26
CSNK1D-211ENST00000579316 SCN5AQ14524 2016 aa16.69■□□□□ 0.26
CSNK1D-211ENST00000579316 TCRBV5S4A2TA0A5A2 114 aa16.69■□□□□ 0.26
CSNK1D-211ENST00000579316 SUPT20HL2P0C7V6 817 aa16.69■□□□□ 0.26
CSNK1D-211ENST00000579316 TTF1Q15361 905 aaPredicted RBP16.69■□□□□ 0.26
CSNK1D-211ENST00000579316 SLC9C2Q5TAH2 1124 aa16.69■□□□□ 0.26
CSNK1D-211ENST00000579316 C16orf86Q6ZW13 317 aa16.69■□□□□ 0.26
CSNK1D-211ENST00000579316 FAM133AQ8N9E0 248 aa16.69■□□□□ 0.26
CSNK1D-211ENST00000579316 PRPF38AQ8NAV1 312 aaKnown RBP16.69■□□□□ 0.26
CSNK1D-211ENST00000579316 CHST13Q8NET6 341 aa16.69■□□□□ 0.26
CSNK1D-211ENST00000579316 Q9Y3F1 56 aa16.69■□□□□ 0.26
CSNK1D-211ENST00000579316 KIF28PB7ZC32 967 aa16.68■□□□□ 0.26
CSNK1D-211ENST00000579316 OAZ1P54368 228 aa16.68■□□□□ 0.26
CSNK1D-211ENST00000579316 PSMC6P62333 389 aa16.68■□□□□ 0.26
CSNK1D-211ENST00000579316 ATP8B2P98198 1209 aa16.68■□□□□ 0.26
CSNK1D-211ENST00000579316 CSPP1Q1MSJ5 1256 aa16.68■□□□□ 0.26
CSNK1D-211ENST00000579316 C12orf60Q5U649 245 aa16.68■□□□□ 0.26
CSNK1D-211ENST00000579316 NOL8Q76FK4 1167 aaKnown RBP16.68■□□□□ 0.26
CSNK1D-211ENST00000579316 SPRED2Q7Z698 418 aa16.68■□□□□ 0.26
CSNK1D-211ENST00000579316 DEFB128Q7Z7B8 93 aa16.68■□□□□ 0.26
CSNK1D-211ENST00000579316 UIMC1Q96RL1 719 aa16.68■□□□□ 0.26
CSNK1D-211ENST00000579316 NUP88Q99567 741 aaPredicted RBP16.68■□□□□ 0.26
CSNK1D-211ENST00000579316 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.68■□□□□ 0.26
CSNK1D-211ENST00000579316 AP5M1Q9H0R1 490 aa16.68■□□□□ 0.26
CSNK1D-211ENST00000579316 SLC38A10Q9HBR0 1119 aa16.68■□□□□ 0.26
CSNK1D-211ENST00000579316 ATP8A2Q9NTI2 1148 aa16.68■□□□□ 0.26
CSNK1D-211ENST00000579316 ZDBF2Q9HCK1 2354 aa16.68■□□□□ 0.26
CSNK1D-211ENST00000579316 ZNF532Q9HCE3 1301 aa16.68■□□□□ 0.26
CSNK1D-211ENST00000579316 BAZ2AQ9UIF9 1905 aaKnown RBP16.67■□□□□ 0.26
CSNK1D-211ENST00000579316 USP34Q70CQ2 3546 aa16.67■□□□□ 0.26
CSNK1D-211ENST00000579316 ZBED4O75132 1171 aa16.67■□□□□ 0.26
CSNK1D-211ENST00000579316 TRIM27P14373 513 aa16.67■□□□□ 0.26
CSNK1D-211ENST00000579316 SMPD1P17405 629 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms